Arvicola amphibius (Eurasian water vole): 119825684
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Entry
119825684 CDS
T08327
Symbol
Ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamp03009
]
119825684 (Ddx55)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119825684 (Ddx55)
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119825684 (Ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
YbjM
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119825684
NCBI-ProteinID:
XP_038202650
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All DBs
Position
10:82669637..82684473
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AA seq
600 aa
AA seq
DB search
MEHVTEGAWESLQVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPIVEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPQFSQILWIGG
RNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENHYMICKADEKFNQLVHFLRNHQQEKHLVFFSTCACVEYYGKALEALLKRAKILCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTVDLLPKLRAMAMADRAVFEK
GMKAFVSFVQAYAKHECSLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPTDVD
TDMIPFKDKIREKQRQKLLEQKRKERTENEGRRKFIKNKAWSKQKAKKERKKKMNAKRKK
DEGSDIDDEDMQELLNDTRLLKKFKKGKITEEEFEKGLLTSTKRTVPLTDLGVSDLEEDG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgtgacggagggtgcctgggagtcgctgcaggtgccgctgcatcctcgggtg
ctgggcgcactgcgcgaattgggcttccctcacatgacgccggtgcagtctgccaccatc
cctctgttcatgaaaaacaaagatgttgctgcggaggctgtgacaggtagtgggaaaacc
ctggcctttgtcatccccattgtggagattcttctgagaagggaggagaagttaaagaag
agccaggtcggagccatcatcatcactcccactagggagctggccattcagattgacgag
gtcctttcgcacttcacaaagcacttcccgcagttcagtcagatcttgtggatcggaggc
cggaatcctggagaagatgtggagaggttcaagcagcatggtgggaacatcattgtggca
acccctggccgcctggaggacatgttccggaggaaggctgagggtctggacctggccagc
tgtgtgagaagcttggatgtcctggtgctggatgaggcagacagacttcttgacatgggc
tttgaagcaagcataaacaccatcctggagttcttgccaaagcagagaagaacaggcctt
ttctcagccacgcagacacaggaagtggagaacttggtgcgagcgggcctccggaaccct
gtccgaatctctgtgaaggagaaaggcgtggcagccagcagtacccagaagaccccatcc
cgcctggagaaccattacatgatatgtaaggcagatgagaaattcaatcagctggtccat
ttccttcggaaccatcagcaggagaagcacctggtcttcttcagcacgtgcgcgtgtgtg
gagtactacgggaaggccctggaggcactgctgaagagagccaagatcctgtgcatccac
gggaagatgaagtacaagcgcaataagatcttcatggagttccgcaagctgcagagtggg
atcctggtgtgcacggatgtaatggcccggggaattgatattcctgaagttaactgggtt
ttacagtacgaccctcccagcaatgccagtgcctttgtgcatcgctgtggacgcacagcc
cggataggccacggcggcagcgctctggtgttcctactgccgatggaggaggcgtacatc
aacttcctggccattaaccagaaatgccccctgcaggagatgagcctccagagaaacaca
gtagaccttctgccaaagctccgggccatggccatggccgacagggcagtgttcgagaag
ggcatgaaagccttcgtgtccttcgtccaggcttatgcaaagcacgagtgcagcctcatc
ttcaggctgaaggatctcgactttgcgagccttgctcgagggtttgctctgctaaggatg
cccaagatgccagaactgagggggaagcagtttccagattttgtgcccacagacgtcgat
actgacatgattccatttaaagataaaattagagaaaaacagaggcagaaacttttggag
caaaaaagaaaagagaggacagaaaatgaagggagaagaaagttcatcaaaaataaagct
tggtcgaagcagaaggccaagaaggagaggaagaagaagatgaatgcgaagaggaaaaag
gatgagggttcggatatcgatgacgaggacatgcaggaactccttaatgatacaaggctc
ttgaaaaagtttaagaaaggtaagatcacagaagaagaatttgagaaggggttgctgaca
agcaccaaaagaacagtcccactgacagacttaggggtctcagacttggaagaggacggc
tga
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