Arvicola amphibius (Eurasian water vole): 119826165
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Entry
119826165 CDS
T08327
Symbol
Tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119826165 (Tmc5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119826165 (Tmc5)
03037 Cilium and associated proteins [BR:
aamp03037
]
119826165 (Tmc5)
Transporters [BR:
aamp02000
]
Other transporters
Pores ion channels [TC:
1
]
119826165 (Tmc5)
Cilium and associated proteins [BR:
aamp03037
]
Other cilia and associated proteins
Stereociliary proteins
119826165 (Tmc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
119826165
NCBI-ProteinID:
XP_038203175
LinkDB
All DBs
Position
1:120652625..120715612
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AA seq
966 aa
AA seq
DB search
MSSFPGNSSYQGHADYPGYSRPQNRTQSYLKTQDHLDNPSFHHPRSNPYSSGSRTNPDYS
SSLEEADYPGPLSSADYRSARGPSFSVHSRTRPDYHESLPEPDYNDFGSDPHRTGSSPEP
DYPESQRHPGFARDRSSTNYAGSRANLGYLGSLEEPDYPGAQGSSDHPGPRASSNLPGSR
RDVGHAGSRINSYLDSFGEPDYPGAENQPNSPHFYGEPDYPDAEEGHGYGSSKVFRRNNG
PFGMLGRDNEDYPEGIEMASMEMAGQQGHSLPGDPRNGYVNSAYERGSSPICAGGNLLLC
ERDWHMSPQGQKLIASLVPMTSRDRIKTIRNQPRTMEEKRELRKIVDKEKSKQRHGALEI
NCCAQCLSSLSLAYRRTRSNLSELLNYVSLWQKTFKVIGGKFGTSVLSYFSFLRWLLKFN
IFSFVMNFSFLIIPQFTVAENNTLSFTGLEFFTGAGYFTDTVMYYGFYTNSTIQHGTDGP
FYNMQLAYIFTIGACLVVCFFSLLFSMAKYFRNNFINPHIYSRGIAKLVFCWDFTVTHEK
AVKLKQKNLSTEIRENLSEIRQENDRLTFNQQLTRFSTHVAAWLVSTGVAAACCVAVYYL
AEYNSEFLKTHRNPGAVLLLPFVVSCINLAVPRFYSMFRLVERFEVPRQEVYVLLIRNIL
LKISIIGILCYYWLNIVALSDEECWETFIGQDIYRLLLMDFVFSLADSLLGEFLRRLIGM
KFITSLSLQEFDIARNVLELIYAQTLAWLGIFFCPLLPFIQMITLIIMFYVKNVSLMMNF
QPPSKAWRASQMITFFIFLLFFPSFTGVLCTLAITIWRLKPSADCGPFRGLPSFIQSVYS
WIDTLHERSGYLWVVWIYQNLIGSVHFFFILTLIVLIITYLYWQITEGRKIMIRLLHEQI
INEGKDKMFLIEKLTKLQDMERRANPSALILERREVEQHNPLYLEDLSAARDLRLRRSVQ
EENPEA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctttcccgggaatagcagctaccagggccatgctgactaccctggctattca
aggccccaaaaccgtacacagagctatttgaaaactcaggatcatctagacaatccaagc
ttccaccatcccaggagcaacccatattcttcgggctccagaacaaatccagactactcc
agctctctagaggaagcagattatcctggacctctgagtagtgcagactatcgcagcgcc
aggggtccttcattctctgtgcattccagaacaaggccagactatcacgagtctttacct
gagccagactataatgacttcgggagcgatccccaccgcacaggctcatccccagagcct
gactatcccgagtctcagcgccatcctggttttgcgagagacagaagcagcactaactat
gcaggttccagagccaacctaggttatttggggtccttggaagaaccagactaccctgga
gctcagggcagctctgatcatcctggccccagggccagttccaacctgccaggctccaga
agagatgtcggtcatgctggctccagaatcaattcctacctagactcctttggggagcct
gattacccaggtgctgagaatcagccaaactcaccccacttttatggagaaccagactat
cctgatgctgaggaaggtcatggttatggctcttccaaagtcttcaggaggaataatggc
ccctttgggatgctggggagagataatgaagattatcccgaaggcattgagatggcatcc
atggagatggcaggtcagcagggccactctctgccaggtgatcctagaaatggctatgtg
aattctgcttatgagagaggaagcagccctatctgtgcaggtggaaacctcctgctgtgt
gagcgtgattggcacatgtcaccccaaggacaaaagctaattgcatccctggttcccatg
acatctagggacagaatcaaaaccatcagaaaccagccaaggaccatggaagagaagaga
gagcttagaaaaatagttgacaaagagaagagtaaacagcgccatggtgccctggagatc
aactgctgtgctcagtgtctgagctccctatccctggcttatcgcagaaccaggagcaac
ctttcagagctcctcaattacgtcagcttgtggcagaagacattcaaggtcatcggaggc
aagtttggaaccagcgtcctgtcctatttcagcttcctgaggtggcttttgaagttcaac
atcttctcatttgtcatgaacttcagcttcctcatcatcccacaattcaccgtggcagag
aacaacaccctgtcattcactgggttggagttcttcacgggggcgggctattttacggac
acagtgatgtactatggcttttacaccaactccacaatccagcatgggacggatggaccg
ttttacaacatgcagttggcctacatcttcaccatcggagcctgcctggtcgtctgcttc
ttcagcctgctcttcagcatggccaagtacttccggaacaacttcatcaacccccatata
tactccagagggatcgctaagcttgtcttttgctgggacttcactgtcacccatgaaaaa
gctgtgaagctaaaacagaagaatctgagcacagagatcagggagaacctgtctgagatc
cgccaggagaatgacaggctcacgttcaaccagcagctgacccgcttttccacacacgta
gccgcctggctcgtctctactggagtggccgcagcctgctgtgtagctgtgtactacttg
gctgagtataactctgagttcttgaagacgcacaggaaccctggggcggtgctgttactg
ccatttgtcgtatcctgcatcaacctggccgtgcctcgcttctactccatgttccgtcta
gtggagaggttcgaggtaccaaggcaggaagtctatgtcctcctgatccgaaacatcctt
ctgaagatctccatcattggaattctttgttactattggctcaacatcgtggccctgtct
gacgaagagtgctgggagactttcattggccaggacatctaccggctccttctcatggac
ttcgtgttctcattggccgattccttactgggggagtttctgaggaggctcattgggatg
aaattcatcacaagtctcagcttacaggagtttgacattgccaggaatgttctagaactg
atctacgcacaaactctggcctggcttggaattttcttctgccctctgctgccgtttatc
caaatgatcactctcatcatcatgttctatgtcaaaaatgtcagcctgatgatgaacttc
caacctccaagcaaggcctggcgggcctcacagatgataacgttcttcatcttcttgctc
ttcttcccgtccttcacgggagtgctgtgcaccctagccatcaccatctggagactgaaa
ccttccgcagactgtggccccttccgaggtctgccttccttcattcagtccgtctacagc
tggatcgacaccctacacgaaaggtccggctacctgtgggtcgtctggatctaccagaac
ctcatcggaagtgtgcacttctttttcatcctcaccctcatcgtgctgatcatcacctat
ctttactggcagatcacagagggcaggaagatcatgatccggctgctccatgaacagatc
attaacgagggcaaagataagatgttcctgatagaaaagttgaccaagctacaggatatg
gagaggagagccaaccccagtgcactgatcctggaaaggagagaagtggagcaacacaac
cctttgtatttggaggacctcagcgctgctcgtgacctgcgattgaggcgatcagtgcaa
gaagagaatccagaagcctga
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