Arvicola amphibius (Eurasian water vole): 119826167
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Entry
119826167 CDS
T08327
Symbol
Abca1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp02010
ABC transporters
aamp04148
Efferocytosis
aamp04975
Fat digestion and absorption
aamp04979
Cholesterol metabolism
aamp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119826167 (Abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119826167 (Abca1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
119826167 (Abca1)
04979 Cholesterol metabolism
119826167 (Abca1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
119826167 (Abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119826167 (Abca1)
Transporters [BR:
aamp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119826167 (Abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
119826167
NCBI-ProteinID:
XP_038203173
LinkDB
All DBs
Position
11:complement(103895062..104012577)
Genome browser
AA seq
2261 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SIKDMHKVLRTLRQIKHSSSNLKLQDFLVDNETFSGFLHHNLSLPRPTVDSLLQADVSLQ
KVFLQGYQLHLASLCNGSNLENIIRLGGPEVSALCGLPREKLAAAEQVLRYNMDILKPVM
TRLNSTSPLPTQQLAEATRTLLNSLGGLAQELFSTKSWSDMRQEVMFLTNVNGSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDMDTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PQIWTFMESSQEMDLVRTLLDSRGNGQFWEQKLDGLDWTAQDIMAFLAKNPEDVKSPNGS
AYTWREAFNETNQAIQTISHFMECVNLNKLEPVPTEVRLINKSMELLNERKFWAGIVFTG
IAPGSAELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKTTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSIKIFAS
LLSPVAFGFGCEYFALFEEQGVGVQWDNLFESPVEEDGFNLTTAVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESEEKSHLGSGQKGASEICMEEEPTHLRLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVEAEIEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDIDPESRETDLLSGMDGKGSYQLK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPGDSGTQKLLNALTRDPGFGTRCMEGDPIPDTPCLVGEEDWSTAP
VPQTIMDLFRKGNWTMKNPSPACQCSSDKIKKMLPVCPPGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQALPPSREVNDAIKQVKK
LLKLTKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQE
GENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDALLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctggcctcagttgaggttgctgctatggaagaacctaacgttccgaagacga
caaacatgtcagctgttactggaagtggcctggcctctcttcatcttcctgatcctgatc
tccgtccgcttgagctacccgccctatgaacagcatgaatgccacttcccgaataaagcc
atgccttctgcaggaacccttccgtgggtacaggggattatctgtaatgccaacaaccct
tgcttccgttatccgactcccggggaagctcccggtgttgttggaaactttaacaagtcc
attgtgtctcgcctgttctcagatgctcggagacttcttttatacagccaaaaagacacc
agcattaaggacatgcacaaggtcctgagaacattacggcagatcaagcattccagctca
aatttgaagctccaggatttcctggtggacaatgagaccttctctggattccttcatcat
aacctgtccctcccaaggccgactgtggacagcctgctgcaggctgatgtcagtctccag
aaggtatttttgcaaggctaccagttacatttggccagtctgtgtaatggatcaaatcta
gaaaatatcattcggctgggtggcccggaagtgtctgccctttgtggtttaccgagggag
aagctagctgccgcagaacaagtgctgcgctacaacatggacatcctgaagccggtcatg
acaagactgaactccacatctcctctcccgacccagcagctggcggaagccaccagaaca
ttgctgaacagcttaggggggctggctcaagagctgttcagcacgaagagctggagtgac
atgcggcaggaggtgatgtttctgaccaacgtgaacggctccagctcctccactcagatc
taccaggccgtgtcccgcattgtctgtggtcaccccgagggtggggggctgaagatcaag
tcgctcaactggtacgaggataacaactacaaagccctcttcggaggcaacggcaccgag
gaagacatggacaccttctatgacaattctacaactccttattgcaatgatctgatgaag
aacctggagtccagccctctttctcgaattatttggaaggcactcaagcctctgcttgtt
ggaaagattctgtatactcccgacactccagctacaagacaggtcatggctgaggtgaac
aagaccttccaagagctggctgtcttccatgacctggagggcatgtgggaagaactcagc
ccccaaatctggaccttcatggagagcagccaagagatggaccttgtgcggacgctgtta
gacagcagaggcaatggccagttttgggaacagaagttggatggattagattggactgcc
caagacatcatggcatttctggccaagaacccagaggatgttaagtcccccaatggctcc
gcgtatacatggagagaggctttcaatgaaaccaaccaggcaatccagacgatctctcac
ttcatggagtgtgtcaacctgaacaagctggagcctgttccaacagaagtccggctcatc
aacaagtccatggagctgctgaatgagaggaagttctgggctgggatcgtgttcacagga
atcgctcctggcagtgctgagctgccccatcacgtgaagtacaagatccgaatggacatt
gacaatgttgagaggaccaataagatcaaggatgggtactgggacccaggtccccgggct
gaccccttcgaggatatgcgctatgtctgggggggcttcgcctacctgcaggatgtggta
gagcaggccatcatcagagtgctgacggggaccgagaagacaacgggtgtctatgtgcag
cagatgccctacccctgttacgttgatgacattttcctgcgggtgatgagccggtccatg
cccctcttcatgaccctggcctggatttactctgtggctgtcatcatcaagggcattgtg
tacgagaaggaggcgcggttgaaggagaccatgcggatcatgggcctggacaatggcatt
ctctggtttagctggtttatcagtagcctcatccctttgcttgtgagtgctggcctgctg
gtcgtcatcttgaagttaggaaacctgctgccctacagtgaccccagcgtggtgttcgtc
ttcctgtctgtgtttgccgtggtgaccatcctacagtgcttcctcattagcacgctcttc
tcccgggctaacctggcagcagcctgtgggggcatcatctacttcacgctctatctgccc
tacgtcctgtgtgtagcctggcaggactatgtgggcttctccatcaagatctttgctagt
cttctgtctcccgtggcttttggatttggctgtgaatactttgccctttttgaggagcaa
ggcgtaggggtgcaatgggacaatctctttgagagcccggtggaggaagacggcttcaat
ctcaccactgccgtgtccatgatgctatttgacaccttcctctatggagtgatgacgtgg
tacatcgaagccgtctttccagggcagtatgggattccccggccctggtatttcccttgt
accaagtcctactggttcggggaggaaagtgaagagaagagtcacctcggttccggccag
aaaggagcatcagaaatctgcatggaagaggaacccactcacctgaggctgggtgtgtcc
attcagaacctggtgaaggtttaccgagatggcatgaaggtggctgtggatggcttggca
cttaatttttacgagggccagatcacctccttcctgggtcacaatggagcggggaagacc
accaccatgtcaatccttactgggttgttccccccaacttctggcactgcctacatcctg
ggaaaggacattcgctctgagatgagttccatccggcagaacctgggcgtctgtccccag
cataatgtgttgtttgacatgctgaccgttgaagagcacatctggttctatgcccgcctg
aaggggctctcggagaagcacgtggaagcagaaattgagcagatggccctggatgtcggc
ttaccccccagcaagctgaaaagcaaaaccagccagctctcaggcgggatgcagaggaaa
ctgtctgtggccttggcctttgtgggtggatccaaggttgtcattctggatgaacccacg
gcaggtgtggacccttactctcgcaggggaatatgggagctcctgctgaagtatcgacaa
ggccgcaccattatcttgtctacacaccacatggacgaagccgacatcctaggggacaga
attgccatcatttcccacgggaaactgtgctgtgtgggctcctccctctttctgaagaac
cagctggggacaggttactacctgaccctggtcaagaaagacgtggagtcgtctctcagt
tcctgcaggaacagtagcagcacggtgtcgtgtctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tccgctatctctaatctcatcaggaagcatgtgtctgaagcccggctggtggaagacatc
ggccacgaactgacttacgtgctgccttacgaagctgctaaggaaggagcttttgtggag
ctcttccacgagattgacgatcgcctctcagatttgggcatctccagttacggcatctca
gagaccaccctagaagaaatattcctcaaagtggccgaagagagtggggtggatgcggag
acctcagatggtactttgccagcgagacgaaacaggcgggccttcggggacaagcagagc
tgtctgcgcccattcactgaggatgatgctatagacccgaatgactctgacatagaccca
gaatccagggagacggacctgctcagtgggatggacggcaaaggctcctaccagctgaag
ggctggaaactcacacaacagcagtttgtggcccttctgtggaagaggttgctgatagcc
agacggagccggaaagggttctttgctcagattgtcctgccagctgtcttcgtttgcatt
gctctggtgttcagcctgatcgtgccacccttcggcaagtaccccagcctggaacttcag
ccctggatgtataacgaacagtacacgtttgtcagtaatgatgctccaggggactcaggc
acccaaaagctcctgaacgctctgaccagagacccaggcttcgggactcgttgcatggaa
ggagacccaattccagacaccccttgcttggtgggggaggaggattggagcactgcccct
gttccccagaccatcatggacctcttccggaagggcaactggacaatgaaaaacccctca
cccgcctgccagtgtagcagtgacaagatcaagaagatgctgcctgtgtgtcccccaggg
gcgggggggctgccacctcctcagagaaagcaaaacactgcagacatccttcagaatctg
acaggaaggaacatttccgactacctggtgaagacgtacgtgcagatcatagccaaaagc
ttaaagaataagatctgggtgaatgagtttaggtatggcgggttttccctgggtgccagt
aattctcaagcccttcctccgagtcgagaagttaatgatgctatcaagcaagtgaagaaa
ctcttgaagctgaccaaggacagttctgcagatcgttttctcagcagtttgggaaggttc
atgacgggactggataccaaaaacaacgtcaaggtgtggttcaataacaagggctggcac
gctatcagttccttcctgaatgtcatcaacaatgccattctccgggccaacctacaggag
ggagagaatccaagccagtatgggatcactgccttcaaccatccactgaacctcaccaag
cagcagctctccgaggtggctctgatgaccacatctgtcgacgtccttgtgtctatttgt
gtcatctttgcgatgtcctttgtcccagccagctttgttgtgttcctgattcaggagcgg
gtcagcaaagcgaagcacctgcagttcatcagtggggtgaaacccgtcatttactggctc
tccaattttgtctgggatatgtgcaattatgtggttcctgctacattggtcattatcatc
ttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgttctagccctt
ctgcttttgctgtatgggtggtcgatcacacctctcatgtacccagcctcctttgtgttc
aagatccccagcactgcctatgtggtcctcaccagtgtgaacctcttcatcggcatcaac
ggcagtgtggccactttcgtactggagctttttaccaacaataagctgaataacatcaat
gacatcctgaagtctgtgttcctcatcttcccacatttttgcctgggacgagggctcatt
gacatggtaaaaaaccaggcgatggctgacgcactggagaggtttggggagaatcgcttt
gtgtctccactctcttgggacttggtaggacgaaacctttttgccatggccgtggaaggg
gtggttttcttcctcattactgtcctgatccagtacaggttcttcatcaggcccagacct
gtaaaggcgaagcttcctcctttgaatgatgaggacgaggatgtgagacgggagagacag
aggattctggatggcggaggacagaatgacatcctggaaatcaaggagctgaccaagatc
tatagacggaagcggaagccagccgttgacaggatttgcgttggcattcctcctggcgag
tgctttggactcctgggtgttaacggtgctgggaagtcatcaacgttcaagatgctgact
ggagataccactgtgaccagaggggacgctctgcttaacaaaaacagcatcttatccaac
atccatgaagtacatcagaacatgggctactgccctcagtttgatgccatcacagagctg
ctgactgggagagagcacgtggagttctttgccctcttgaggggagtcccagaaaaagaa
gttggcaaggttggtgaatgggcgattcgcaaactgggccttgtgaagtatggagagaaa
tacgccagcaactacagtggaggcaacaaacggaagctctccacagccatggctttgatt
ggggggcctcctgtggtctttctggatgaaccaaccacaggcatggaccccaaagctcgg
agattcttgtggaattgtgccttaagcattgtcaaggaggggagatctgtagttcttaca
tctcatagtatggaagaatgtgaagctctgtgcacaaggatggccattatggtcaacggg
aggttcaggtgccttggcagtgtccagcatctgaagaacaggtttggagacggttacacg
atagttgtacgaatagcaggctccaaccctgacctcaagcctgtccaggagttctttgga
cttgcctttccagggagtgtcctaaaagagaaacaccgaaacatgctacagtaccagctt
ccctcctccttgtcgtctctggccaggatattcagcatcctctcccagagcaaaaagcga
ctccacatagaagactattctgtctctcagacaacacttgaccaagtatttgtgaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccagaca
gttgtggacgtggctgtcctcacgtcttttttacaagatgagaaagtgaaagaaagttat
gtgtga
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integrated database retrieval system
