Arvicola amphibius (Eurasian water vole): 119826203
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Entry
119826203 CDS
T08327
Symbol
Elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamp03016
]
119826203 (Elp1)
Transfer RNA biogenesis [BR:
aamp03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
119826203 (Elp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
119826203
NCBI-ProteinID:
XP_038203243
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All DBs
Position
11:complement(107189184..107247756)
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AA seq
1348 aa
AA seq
DB search
MRNLKLFRTLEFRDIPARGKPQCFCLRTERGTVIIGSECGLIEVDPEQREVKTEISLVAE
RFLPEDGSGCIVGIQGLPDQESVCVATASGDVILCNLSTRQLECVGSVANGISVMSWSPD
QELVLLVTGQQTLIMMTRAFEVIAEQQIHQEDFGEGKFVTLGWGSRETQFQGSEGRQAAF
PVQVHESALPWDDHRPHITWRGDGQFFAVSVVCPQTGARKIRVWNREFTLHSTSEPVPGL
GPHLAWKPSGSLIASTQDKPNQQDVVFLEKNGLLHGQFTLPFFKDEVKVNDLLWNADSTV
LAVWLEDLPKEDRPILKSYVQLWTVGNYHWYLKQSLPFSTEVMNQVVSLLWDPVIPGRLH
ILCQGWRYICCDWHWTTDRSSGNSASDLANVAVIDGNRLLVTVFRQTVIPPPMCTYRLLI
PHPVNQVMFPAPLRKSNDLAVFDASNQISVYKCGDNPDLDPTVKLGAVGGNGFKVPLSTP
QLEKRYRIQLGNGEDEEVNSLQLSLLTWIEEAVFLAVSRSHTSLQSAICRLTVAPSEVDE
EQGQLVVSSSVTVDGVIIGLCCSSKTKSSVVQLADGQLLRCFWDSPTLTVEPWKSAEGLP
VRFAHPCTQVEVAVIGGQECVLGLTDRCRFFVNDTEVASNITSFAVCDEFLLLTTHSHTC
HCFSLRCASLKMLQDGLCGSNEANGESLRRVERGSRIVTVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRDWLDNLMFKEAFECMRKLRINLNLIHDHNPEVFLGNVEAFIKQIDSVNHI
NLFLTELKEEDVTKTMYPPPVPNTVQTFRDPDKKKLDLICDTMRVAMEKINPHKYYLSIL
TSHVKKTTPELEIVLQKVHKLKARNAPPGPETVSAEEALKYLLLLVDVNELYNHSLGTYN
FDLVLMVAEKSQKDPKEYLPFLNALKKMEINYQRFTIDKYLKRYEKALGHLSKCGPEYFT
ECLNLIKDKNLYKEALKLYQPQSLQYQAISVVYGEHLMQEHLYEPAGFVFARCGAHQKAL
SAFLACGSWQQALCIASQLQLSEDQMVGLARTLAGKLMEQRKHTEAALVLEQYAQDYEEA
VLQLLEGAAWEEALRLVYKYDREDIIETSVKPSILEAQKNFMAFLDSQTAIFIRHKDRFL
VVRELKSQGPQMHVDNEAVAPGPESDVFSESGSEISGRYSHSNSRISARSSKNRRKAERK
KYSLKEGSPLEDLALLEALSEVVQSIDKMKDEVHSILRALFILAFEQQAQELQKAYENTL
KLMERAVPEIWTLDCQQSSLSSVLGPNSTVNSITASYQQQQHQQQQQQQPPQPQQQQQPP
PSVPVLDVGICVPPKIDLRGLWKLSLLD
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatctgaagttgttccggactctggaatttagggacattccagcacgagggaaa
cctcagtgtttctgtctccgaactgaacggggaacagtgatcatcggctcagaatgtggg
ctgattgaagtggaccctgagcaaagagaagtgaagactgaaatctctctggtggcagag
cgctttcttccagaggatgggagcggctgcattgtgggcattcagggcttgccggatcag
gagtccgtgtgtgtggccactgcctctggggatgtcatcctctgcaacctcagcacacgc
cagctggaatgtgttgggagcgtggctaatggtatctctgtcatgagctggagtcctgat
caagaactggtgcttcttgtcacaggtcaacagaccctgattatgatgacaagagccttt
gaagtgatcgcagagcagcagatccaccaggaagattttggtgaaggcaagtttgtcact
ctcggatggggcagtagggagacgcagttccagggctcagaaggcaggcaagcagccttt
ccggtgcaggtgcatgagtctgccctgccctgggatgaccacagaccacatattacctgg
cgtggggatgggcaattttttgctgtgagtgttgtttgcccacaaacaggggctcggaag
atcagagtgtggaaccgagagtttactttgcactccaccagcgagcctgtgccaggactg
gggccccacctggcttggaaaccctcaggtagtttgattgcatctactcaagataaaccc
aaccagcaagatgttgtatttcttgagaaaaatggacttcttcatggacaatttacactt
cctttcttcaaagatgaagttaaagtaaatgacctgctgtggaatgcagattctactgtg
cttgctgtgtggctggaagaccttccaaaggaagaccgtcctattctgaaaagttatgtc
cagctctggaccgtggggaactatcactggtatctcaagcaaagcctgcccttcagcacc
gaagtgatgaaccaggtcgtgtctctgctgtgggacccggtgattccaggccggctgcat
attctctgtcagggctggcgttatatatgctgtgactggcactggaccactgaccggagc
tctggaaatagtgccagtgacttggcaaatgtggctgtcatcgacggaaacaggctgttg
gtaacagtcttccggcagactgtgatcccacctcccatgtgtacctaccggctgctgatc
ccacacccagtgaatcaagtcatgttccctgcgcccctcagaaagagcaatgaccttgct
gtctttgatgccagtaaccagatctctgtctacaagtgtggtgataacccagacttggat
cccacagtgaagctgggagctgtgggtggaaatggatttaaagttcctcttagcactcct
cagctggaaaagagatacagaattcagcttgggaacggtgaagatgaggaggtaaactca
ctgcagctgagccttctcacctggattgaagaagccgttttcctggctgtaagccgcagt
cacaccagcctgcagtctgccatttgccgtctgactgtggccccttctgaggtggatgag
gagcagggacagctggttgtcagttcatctgtgacagtggatggggtcatcattggttta
tgttgcagttccaaaaccaagtcatcggtggtccagctggctgatggccagctactcagg
tgcttttgggactcaccaactctgactgtggaaccctggaagagcgctgaaggattacct
gttcgatttgctcacccatgcacacaggtggaagtggccgtgattggaggacaggagtgt
gtccttggtctgactgacaggtgtcgctttttcgtcaatgacactgaggttgcatcaaat
atcacgtcatttgcagtgtgtgatgagtttttactgttgacaacccattcccatacctgc
cactgtttttccctgagatgtgcttcacttaagatgttacaggatggtctgtgtggcagt
aatgaggccaacggagaaagcctgcggagagtggagaggggctcccggatcgtcacagtt
gttccccaggacacaaagcttatactacagatgccgaggggaaacttggaggttgttcat
catcgggccttggtcttggctcagattcgggactggctggacaatcttatgtttaaggaa
gcatttgaatgcatgagaaaactgagaattaacctcaatctgattcacgatcataaccct
gaggtatttcttgggaacgttgaagccttcataaagcagatagattccgtaaatcatatt
aacttgttcctcacagaattaaaggaagaagatgtcacaaagactatgtaccctccaccg
gtgcccaatactgtccagacattcagggatcctgacaagaagaaacttgacctgatctgt
gataccatgagggtagcgatggagaaaatcaatcctcacaagtactacctgtcaatactc
acatctcacgtgaagaaaacgaccccagaactggaaattgtgctgcagaaggtacacaag
cttaaagcaagaaatgctccccctggtcctgagactgtgagcgcagaggaggccttgaag
tacctgctgctcctggtagatgtcaacgaattatataatcattctcttggaacctataac
tttgatttggttctcatggtagccgagaagtcacaaaaggatcctaaggaatatcttcca
tttcttaatgcacttaagaaaatggagattaattaccagcggttcaccatagacaagtac
ttgaaacgatatgaaaaggctcttgggcacctcagcaagtgtggacctgagtatttcaca
gaatgcttaaatttgataaaagataaaaacttgtataaggaagctctgaagttatatcag
ccacagtcactgcagtaccaggcgatcagtgttgtttatggggaacacctgatgcaagag
cacctgtatgagccagcaggatttgtgtttgcccgatgtggggcccatcagaaggcgctc
tccgcatttttggcttgcggcagctggcagcaagctctctgtatagctagccagcttcaa
ctctccgaagaccagatggtgggccttgctagaactctggcaggaaagctgatggagcag
aggaaacacactgaggcagccttagtcctggagcagtatgcccaggattatgaagaagct
gtgctccagctgctggaaggagccgcctgggaagaagctctgaggctggtgtacaagtat
gacagagaggatattatagaaaccagcgtaaagccttccattttagaagcccaaaaaaat
tttatggccttcctggactctcagacagcgatattcattcgccataaagaccgttttctg
gtggttcgagagctgaaaagccaaggaccacagatgcatgtggataacgaggcggtggcc
cctggtccagagtcggatgttttctcggagagtggcagtgagataagtggcagatactcc
cacagtaactcgcggatatctgcgaggtcatctaaaaaccggcgcaaggcagagcggaag
aagtacagcctcaaagaagggagtcctctagaggacctggcactcttggaggcgctgagt
gaagtggtacaaagcattgacaagatgaaagacgaagtgcacagtatcttaagggcgctc
tttatcctggcgtttgaacagcaagcacaggaactgcagaaggcctatgagaatactctg
aagcttatggagagggcagttccggaaatctggactcttgactgccagcagagttcactc
tcatcggtcctaggtccgaattccactgtgaatagcatcaccgcctcttaccagcagcag
cagcaccagcagcagcagcagcagcagccgccccagccgcagcagcagcagcagccgccg
ccttctgtccctgttctcgatgttggaatctgtgtgccaccaaagattgacctgagaggc
ctatggaagctgagcctgctggactga
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