Arvicola amphibius (Eurasian water vole): 119826217
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Entry
119826217 CDS
T08327
Symbol
Rad23b
Name
(RefSeq) LOW QUALITY PROTEIN: UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03420
Nucleotide excision repair
aamp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119826217 (Rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
119826217 (Rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aamp03051
]
119826217 (Rad23b)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119826217 (Rad23b)
Proteasome [BR:
aamp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
119826217 (Rad23b)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
119826217 (Rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
DUF1421
UBA_2
Dsc3_N
UBA_9
Motif
Other DBs
NCBI-GeneID:
119826217
NCBI-ProteinID:
XP_038203264
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Position
11:105944166..105985753
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AA seq
420 aa
AA seq
DB search
MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILSDDTALK
EYKIDEKNFVVVMVTKPKAVTAPVPAXTQPSNAPTTAAVSSSTATVVAQAPAPTPASAPT
STPASTTPASTTASSEPAPASATQPEKVAEKPAQSPVITSPAPADSTPGDSSRSNFSLSP
THRLVTGQSYENMITEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAVVD
PPPQAVSTGTPQSPAVAAAAATTAATTATSAGGHPLEFLRNQPQFQQMRQIIQQNPSLLP
ALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGGGGGGGGGGGGSGGI
ADAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDED
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcactctgaagacccttcagcagcagaccttcaagatcgacatcgacccggag
gagacggtaaaggcactgaaagagaagattgaatctgaaaaggggaaagatgcctttcca
gtagcgggtcagaagctaatctatgcaggcaaaatcctcagtgatgacactgctctcaaa
gaatacaaaattgatgagaagaactttgtggtggttatggtgacaaaacccaaagcagtg
acagccccagtgccggcgnacactcagccatcgaatgctcccaccacggctgcagttagc
tcctccacggcaacagttgtggctcaggctccagcccccacccccgcttcagctcccact
tccacacctgcatctactactccagcctcaactacagcatcttctgaacccgcacctgct
agtgcaactcagcctgagaaagttgcagaaaagccagcacagtcaccagtgattactagc
ccagcaccagctgacagtacaccaggagattcttcccggtcaaacttttccttgtccccc
acacaccgtttagtgacaggtcaatcttacgagaatatgataactgagatcatgtcaatg
ggctatgaacgagagcaagtaattgcggccctgagagccagtttcaacaaccccgacaga
gctgtggaatatcttctaatgggaatcccaggagatagagaaagtcaggctgtggttgac
cctcctccccaagcagtgagtactggaactcctcagtctccagcagtggcagcagctgca
gcgaccacagcggcaacgacagcaactagtgctggaggtcacccccttgaatttttaagg
aatcaacctcagtttcaacagatgcgacaaattatccagcagaatccttccctgcttcca
gctttgctacagcagataggtcgagagaaccctcagttgctgcagcaaattagccaacac
caggaacactttatccagatgctaaatgaaccggttcaggaagcaggtggtcaaggtgga
ggaggaggtggcggaggcggaggtggcggaggtggtggtggaggtggcagcggaggaatt
gcagatgctggaagtgggcacatgaactacattcaagtaacacctcaggaaaaagaagct
atagaacggttaaaggcactaggatttcctgaaggacttgtgattcaagcatattttgct
tgtgagaagaatgagaatttggctgccaactttcttctacagcagaactttgatgaagat
tga
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