Arvicola amphibius (Eurasian water vole): 119826219
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Entry
119826219 CDS
T08327
Symbol
Chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119826219 (Chd7)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119826219 (Chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
119826219
NCBI-ProteinID:
XP_038203267
LinkDB
All DBs
Position
11:116220759..116399957
Genome browser
AA seq
2985 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPMEQGFPSLQPPLHHPSTN
QNQTKLTHFDHYNQYEQKMHLMDQPSRMMGSAPGNGLASPHSQFHTPPVQVPHGGGGGSQ
MGVYPGMQSERHGQSFVDSGSMWGPRAVQVPDQIRAPYQQQQPQPAPSGPPAQGHPQHMQ
PMGNYMARGDFSMQQHGQPQQRMGQFPQGQEGLSQGNPFIATSGPGHLSHLPQQSPSMAP
SLRHPVQQFHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRSQTVPSPTVNNSG
QYSRYPYSNLNQGLVNSTGMNQNLGLTNSSPMNQSVPRYPNAVGFPSSSGQGLRHQQPIH
ASGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGMPMEVGSYP
NMPHPQPSHQPPGAMGLGQRNIGPRNMQQPRPFMGMSSAPRELTGHMRPNGCPGVGLADP
QAIQERLIPGPQHPGQQPSFQQLPTCPPLQPHPGLHQSSPPHPHHQPWAQLHPSPQSTPQ
KVPVHQHSPSEPFLEKPDMTQVSGQNAQLVKGDDYLPSIEQQPQQKKKKKKNNHIVAGDP
SKSFGKDDFPGGVDNQELSRNSLDGSQEEKKKKKRPKVKKDPKELKEPKEKKEPKTPKAP
KIPKEPKEKKAKTVTPKPKSSKKSSNKKPDSEASALKKKVNKGKTEGSENSDLDKTPPPS
PAPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDSPSNTSQSEQQES
VDAEGPVVEKIMSCRSVKKQKESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEKDKRIQQ
KIKRFKSKQGQNKFLSEIEDDLFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYE
DSTWELRQDIDQAKIEEFEQLMSREPETERVERPPADDWKKSESSREYRNNNKLREYQLE
GVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWERE
FRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFEMILTDCPEL
RNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPS
RFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQ
KKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKEAHN
AESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYE
RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL
QAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQ
LSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEGKGSTFAKASF
VVSGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRLYSAVKEDELM
EFSDLESDSEEKPCAKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDILSHGRYKRQL
TEQDVETICRAILVYCLNHYRGDENIKSFIWDLITPTADGQTRALLNHSGLSAPVPRGRK
GKKVKAQSTQPVVQDADWLASCNPDALFQEDSYKKHLKHHCNKVLLRVRMLYYLRQEVIG
DQADKILEGADSSEADVWIPEPFHAEVPADWWDKEADKSLLIGVFKHGYEKYNSMRADPA
LCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRVPFKDEIDEFANS
PPEDKEESLEIHGTGKHSESNAELGQLYWPNTSTLTTRLRRLITAYQRSYKRQQMRQEAL
MKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFGVVFDPVKQQFDW
NQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPSKPEDEPPDLASLIEPITEERASRT
LYRIELLRKIREQVLHHPQLSDRLKLCQPSLDLPEWWECGRHDRDLLVGAAKHGVSRTDY
HILNDPELSFLDAHKSFAQNRGAGTVSSLNTLAVGFGQTPQGVSSAHAHEEKVTEQAEGK
AEEAEHSPARERSVGKEEEEEAGGGAKESKQDRETEANSLKSELKGVEGSADPGSKSVSE
KGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDETRDGFYMEDGDP
SVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLVPGYTPSTM
DSPLQKRSLAELSMVSQASISGSEDITTSPQLSKDDALNLSVPRQRRRRRRKVEIEAERA
AKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSKFSSLTSKFILPTASTPV
SDAFKNQMELLQAGLSRTPTRHLLNGSLMDGEPPMKRRRGRRKNVEGLDLFFMSHKRTAL
SAEDAEVTKAFEDDIETPPIRNIPSPGQLDPDTRIPVINLEDGTRLMGEDAPKNKDLVDW
LKLHPAYTVDMPSYVPKNADALFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPVVNKRN
GKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRGEGA
SRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNLQSLQLAGLMG
FPPGLATAATAGGDAKSPAAVLPLMLPGMAGLPNVFGLGGLLNNPLSAATGNTTTAPQGE
PEDGTSKAEEKGTEHEDENRDSEKSTDAAVSAADSANGSVGAATAPAALPSNPLAFNPFL
LSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAAAVGTSEEKAAEKAEGGPCKEGET
LEGSDAEENLDKTAESSILEDEVAQGEELDSLEGGDEIDHNGNDE
NT seq
8958 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctctttggcgaggatgggaatatattcagtgagggc
ctcgaaggccttggggaatgtggctaccctgaaaacccagtgaaccccatgggtcagcag
atgcccatggaacaaggcttcccctccttacagccaccccttcatcatccttccaccaat
cagaatcaaaccaagttgacccattttgatcactataatcagtacgaacagaagatgcat
ctgatggatcagcctagcagaatgatgggcagcgcccctgggaacgggctggcatctccg
cactcacagttccacaccccccctgtccaggtgccacacggaggcggcggcggcagtcag
atgggagtctaccccggcatgcagagcgaaaggcatgggcagtcttttgtggacagtggt
tccatgtggggcccgcgggccgtccaggtaccggaccagatccgagccccctaccagcag
cagcaaccgcagccagctccgtcggggccgccggcacagggccacccccagcacatgcag
cccatgggcaactatatggcgcgcggggatttttccatgcagcagcatggccagccgcag
cagaggatgggccagtttccccaaggtcaagagggcctcagccagggaaatcctttcatt
gccacctcaggacccggccacttgtcgcacctgccccagcagagccccagcatggcccct
tccctgcgccacccggtgcagcagttccaccaccccccgactgctctccacggggaatcc
gtggcccacagtcccagattctccccaaatcctcctcaacaaggggccgtccggccgcaa
acccttaactttagttctcggagccagacggtcccctcccctactgtaaacaactcaggg
cagtactctcgatacccttacagtaacctaaatcagggattagttaacagtacagggatg
aatcagaacttaggccttacaaacagttctccaatgaatcagtccgtaccaagatacccc
aatgctgtaggattcccgtcaagcagtggtcaaggactaaggcaccagcagcccatccac
gccagtggctcacttaaccaaatgaacacacaaactatgcatccttcacagcctcaggga
acttatgcctctccacctcccatgtcacccatgaaagcaatgagtaatccagcaggcacg
cctcctccgcaagtcaggcccggaagtgctgggatgcccatggaagttggcagttatcca
aatatgccccaccctcagccgtctcaccagccccctggtgccatgggactcggacagagg
aatataggccccagaaacatgcagcagcctcgtccattcatgggcatgtcctcggcaccg
agggagttgaccgggcacatgagaccaaacggttgtcctggtgttggccttgcagatcca
caagccatccaggaacgactgatccccggcccacagcatcctggtcaacagccatctttt
cagcagctgccaacctgccctccactccagccccacccaggcttacatcagtcttccccg
ccacaccctcatcaccagccttgggcacaactccacccgtcaccccagagtaccccgcag
aaagtgcctgtgcatcagcattctccgtcggagccctttctagagaagccggacatgact
caggtcagcggacagaacgctcagctggtgaagggcgacgattacctgccgtcaatagaa
cagcagccacagcagaaaaagaagaaaaagaaaaacaaccacattgttgcaggggatcct
agtaaaagttttggtaaagatgacttccctggtggggttgataaccaagaactaagtagg
aactcactggatgggtcccaagaagaaaaaaagaaaaagaaaaggccgaaagtcaaaaaa
gatccgaaggaattgaaggaaccgaaggagaagaaagagcccaagaccccaaaagccccg
aagatccccaaagagccaaaggaaaagaaagcaaaaactgtcacaccaaaacccaaatcc
agcaaaaagtcaagtaataagaagccggactcagaagcaagtgctttgaagaaaaaggtc
aacaaaggaaaaacagaaggttctgaaaactcagacttggacaaaacacccccaccgtcc
cctgcccctgaagaggatgaagacccaggtgttcagaagaggcggtccagcaggcaggtg
aagcggaagcgatacactgaagacttggagttcaagatttctgatgaggaggcagatgat
gcagatgctgctgggagagactctccatccaacacctcacagtcggagcagcaggaatct
gttgatgcagaaggcccagtggtagagaagatcatgagctgtcgttccgtgaagaagcag
aaagaatctggcgaggaggtggaagttgaggagttttacgtaaagtacaaaaacttctcg
taccttcattgtcagtgggcgtctgtggaagatctggagaaagataagagaattcagcaa
aagataaaacgatttaagtcaaaacagggccagaacaaattcctttcagagattgaggat
gatctttttaatccagattatgtggaagttgaccggataatggacttcgcacgcagcaca
gatgaccggggcgagcctgtgactcactatctggtgaagtggtgctcactcccttacgaa
gacagcacatgggagctgaggcaggacatcgatcaagcaaagatcgaagagttcgagcaa
ctcatgtccagggagccggaaacagagcgtgtggagcgacctcctgctgatgactggaag
aagtcggagagttccagggagtatagaaacaataacaaactcagggaataccagttggag
ggagtgaactggctacttttcaattggtacaacatgcgaaactgcattttagcagatgaa
atgggtctgggaaagactatccagtctattacatttctctatgagatatatttgaaagga
atccatggcccctttttagtaattgccccattgtccacgatccccaactgggaaagggaa
ttccgaacctggacggagctaaacgtggttgtgtatcacgggagccaagctagtcgtcgg
accattcagttgtatgaaatgtacttcaaagatccccagggtcgagtgataaaggggtcc
tataagtttcatgccatcatcactactttcgagatgatcctgacggactgtcctgagctg
cgcaatatcccctggcgctgtgtggtcattgacgaagcccacaggctgaagaacaggaac
tgcaagctgctggaaggactgaagatgatggacctggaacacaaagtgctgctgacgggg
accccgctgcagaacaccgtggaagagctcttcagcctgctccatttcttggagccaagt
cgcttcccttcagaaacaaccttcatgcaagaatttggcgatctgaaaacagaagaacag
gtgcaaaaactacaggctattctaaagccaatgatgttgagacgtctcaaagaggatgta
gaaaagaacttggcccccaaagaagaaactattattgaagttgagctaacaaacattcag
aagaaatattaccgagccatccttgagaagaattttacatttctttccaaaggtggtgga
caagctaacgtacctaaccttttaaacactatgatggaactgagaaagtgctgcaatcac
ccctatctaatcaatggtgctgaagagaaaattttggaagagtttaaagaagcacacaat
gcagagtctccagattttcagctccaggcaatgatccaggctgctggcaagctggtgctg
attgacaagctgctgccaaagctgaaggctggtggccacagggtgcttatcttctcccag
atggtgcgctgcttggacatcctggaagactatctcattcagagacggtatccatacgaa
aggatcgatggccgagtcagaggcaacctccgccaggcagccattgacaggttctccaaa
cctgattccgataggtttgttttcctcctgtgcacacgggcaggaggtctaggcattaat
ctcactgctgctgatacctgcatcatctttgactcagactggaatccccagaatgacctc
caggctcaggctcggtgccacagaatagggcagagcaagtctgtcaaaatctacaggctg
ataacgagaaactcctatgaaagggagatgtttgacaaggctagtttgaagctgggcctg
gataaagccgtgctgcagtctatgagtggaagagaaaacgccaccaacggggttcaacag
ctttccaagaaggagatagaagaccttctacgaaagggagcttatggtgcacttatggac
gaggaagacgaagggtctaagttctgtgaagaggacattgaccagattctccttcgtcga
acccacactattaccattgagtccgaaggaaaagggtccacgtttgctaaggccagcttt
gttgtatctggaaataggacagatatttctttggatgacccaaatttctggcagaagtgg
gctaagaaggctgaactggacatcgatgccttaaatgggaggaacaacctggtcatagac
actccaagagtaaggaagcagacgcggctctacagcgccgtgaaggaggatgagctgatg
gagttctccgacctggaaagcgattccgaagaaaagccttgtgccaagccacggcgccct
caggacaagtcccagggctatgccaggagtgagtgtttccgggtggagaagaacctgctg
gtctacggctggggccgctggacagacatcttgtcccatggacgctacaaacgtcagctc
actgagcaagacgtagaaaccatctgcagagccatcctggtgtactgtctcaatcactac
cgaggggatgagaacatcaagagctttatctgggacctgatcacgccgacagccgatggc
caaactcgagccctgctcaatcattccggtctgtcggcccctgtgccaaggggccggaag
gggaagaaggtaaaggcccagagtacgcagccagtagtgcaggatgcggactggctggca
agctgcaacccagatgccctgttccaggaggacagctacaagaagcacctgaagcaccac
tgcaacaaggtcctgctgcgtgtccgcatgctgtactacctaagacaagaagtgataggc
gaccaagcagataagatcctcgagggtgctgactctagtgaagcagacgtgtggatccct
gagcctttccatgctgaagttcctgcagattggtgggataaggaagcagacaaatccctg
ctaatcggagtgttcaaacatggctatgagaagtacaattccatgcgagctgaccctgcg
ctgtgctttctggaacgagttggtatgcctgacgccaaggccatcgctgccgagcaaaga
gggacagacatgctagcagatggcggtgacggtggagaatttgatagagaagatgaagat
ccagaatataagccaaccagagtgccattcaaagacgaaatagatgaatttgcaaattct
cccccagaggataaggaggagtccctggaaatacacggcacaggcaagcacagcgagagc
aacgctgagttaggtcaactttactggccgaacacgtcaaccctgactacacgcctgcgc
cggctcattactgcctatcagcgcagctataaaaggcaacaaatgaggcaggaggcccta
atgaagacagaccggcgcagacggaggcctcgggaggaagtgcgagctctggaggcggaa
agggaagctattatatctgagaaaaggcaaaagtggactagaagagaagaagctgatttt
taccgtgtggtgtccacctttggggttgttttcgaccctgtgaagcagcagtttgactgg
aaccagttccgcgcctttgccaggctggacaaaaaatctgacgagagcttggagaagtac
ttcagctgctttgtggccatgtgcaggcgggtgtgtcggatgccctccaagcccgaggac
gagccacccgacctggcctccctcatcgagcccatcactgaggaacgagcatcgaggact
ctgtaccgcattgaactgctgcgcaagatccgagagcaagtcctccaccacccacagctg
agtgacaggctgaagctctgccagcccagcctggacctgcctgagtggtgggaatgtgga
cggcatgacagggacctgctggtgggcgctgctaagcatggggtcagccggaccgactac
cacatcctcaacgaccccgagttgtccttcctcgatgcacacaaaagctttgctcagaac
cgtggggctgggaccgtctcttctttgaatactctggccgtgggctttggccagactcct
caaggcgtttcctcggctcatgctcacgaagagaaggtaactgagcaggctgagggcaag
gcagaggaagctgaacactcaccggctagagagaggtcggttgggaaagaggaggaagaa
gaagctggtggcggggccaaggagagcaagcaggatcgtgagactgaggccaactccctg
aagagcgaactgaaaggggtcgagggcagtgcagaccccgggtccaagtctgtctccgag
aaaggctcagaagaggatgaggaagaaaaactggaggacgacgataagtcagaggagtcg
tcgcagcccgaagcaggagctgtgtccagagggaagaattttgatgaggaaagcaatgct
tccatgagcactgccagggacgagacccgagatggattctacatggaagacggagaccct
tctgtggctcaactccttcacgagcgaacctttgccttctcgttctggcccaaggacaga
gtaatgataaaccgattagacaacatctgtgaagccgtactcaaaggcaaatggccagtc
aatcggcgccagatgtttgacttccagggcctcgtccctggttacacgccctccaccatg
gacagtcccttgcagaagaggagtttggccgagctctccatggtcagccaggccagcatc
agcgggagtgaggacatcaccacgtctcctcagttgtccaaggatgacgcccttaacctg
tccgtccctcgccaacggcggcgacgaaggagaaaagttgaaatagaggccgaaagggct
gccaagaggcgaaatcttatggagatggttgcccagcttcgagagtctcaggtagtctca
gagaacggacaggaaaaagttgtggacttatcaaaggcctcaagagaggccacaagttct
acctcaaagttttcatctcttacttcgaagtttatcttgcctaccgcgtctacgccagtg
tccgatgcctttaagaaccagatggaacttctgcaggcaggcctttcgcgcacccccacc
aggcatctgctcaacggctccctgatggatggagagcctcccatgaagaggaggcggggc
aggaggaaaaatgtggagggcctcgacctgtttttcatgagccacaaacggacagcatta
agtgcagaggatgctgaggtgaccaaagcttttgaagacgatatagagaccccaccaata
cgaaacattccttctcctggacagctggaccctgacacacggatccctgtgataaatctt
gaagacgggacgaggctgatgggagaagatgctcctaaaaacaaggacttggttgactgg
ctaaagctgcatcctgcttacactgtcgatatgcccagttatgtaccaaagaatgcagac
gcgctgttttcctcgtttcaaaaaccgaaacagaaacgacatagatgtcggaatcctaat
aaattggatataaacactttgaccggggaggagagggtcccagttgttaacaaacggaat
gggaagaagatgggtggagccatggcccctccaatgaaggacctgcccagatggctggag
gagaaccctgagtttgcagtcgctccagactggaccgatatagtcaagcagtctggtttt
gtccccgagtccatgtttgaccggcttctcactggacctgtggtgcggggagaaggagcc
agccggagaggacggaggcccaaaagcgagatcgcccgggcagcggctgcggccgctgct
gtggcctctacttcagggatcaaccctctgttagtgaacagcctgtttgctgggatggac
ctgacgagcctgcagaatctccagaacctccagtccctccagcttgcagggctcatgggc
ttccctccaggactggccacagctgccaccgccggaggcgacgcgaagagccccgctgcc
gtgctgcccctgatgctgccaggaatggcaggcctgcccaacgtgttcggcctgggcggg
ctgctgaacaaccctctctcagctgctactggaaacaccactactgctccccagggagag
cccgaggacggcacttccaaggcggaagagaaaggaaccgagcacgaagacgagaaccga
gactcggagaaaagcacagacgccgccgtttcggctgccgactcggcaaacggatctgtt
ggtgctgctactgccccggctgcattgccctccaacccgctggccttcaaccctttcctc
ctgtccaccatggccccaggcctcttctacccatccatgtttctacctccaggactgggg
ggattgacactgcctggcttcccggcgctggcgggactgcagaacgccgccgccgtgggt
accagtgaagaaaaggctgctgagaaggccgagggaggcccctgtaaagaaggagagacc
ctggaaggcagcgatgccgaggagaacctggacaagactgcagagtcctccatcttggaa
gacgaggttgcacagggtgaagagctggactccctcgaaggcggggatgagatagaccac
aacggaaatgacgagtag
DBGET
integrated database retrieval system
