Arvicola amphibius (Eurasian water vole): 119826394
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Entry
119826394 CDS
T08327
Symbol
Nlgn1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119826394 (Nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119826394 (Nlgn1)
Membrane trafficking [BR:
aamp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
119826394 (Nlgn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
119826394
NCBI-ProteinID:
XP_038203624
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All DBs
Position
11:48619692..49302392
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AA seq
854 aa
AA seq
DB search
MARPRSMWPNYVWRAMMACVVHRGLGAPLTLCLLGCLLQTVHVLSQKLDDVDPLVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNATQFAPVCPQN
IIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKI
CRKGGPLTKKQTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASY
GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGS
GAGGSCVNLLTLSHYSEGLFQRAIAQSGTALSSWAVSFQPAKYARMLATKVGCNVSDTVE
LVECLQKKPYKELVDQDVQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQ
GEGLKFVENIVDSDDGISASDFDFAVSNFVDNLYGYPEGKDVLRETIKFMYTDWADRHNP
ETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAWADAAHGDEV
PYVLGIPMVGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNR
FEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDISQYTSTTTKV
PSTDITLRPTRKNSTPVTSAFPTAKQEDPKQQPSPFSVDQRDYSTELSVTIAVGASLLFL
NILAFAALYYKKDKRRHDVHRRCSPQRTATNDLTHAPEEEIMSLQMKHTDLDHECESIHP
HEVVLRTACPPDYTLAMRRSPDDVPLMTPNTITMIPNTIPGIQPLHTFNTFTGGQNNTLP
HPHPHPHSHSTTRV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcccagaagcatgtggccaaattatgtttggagagccatgatggcttgcgtg
gtacacaggggattgggtgccccgttgactctctgcttgttgggatgcttgctgcagact
gtccatgtgctctctcaaaaattggatgatgtagacccattggtgaccactaactttggc
aagataagaggaattaagaaagaactcaataatgaaatattggggcctgtcattcagttt
cttggggttccatatgctgctccaccaacaggtgaacatcgttttcagcctccagaacca
ccgtctccctggtctgatatccggaatgctacgcaatttgctcctgtatgtccccagaat
atcattgatggcagactgcctgaagttatgcttcctgtatggttcactaataacttggat
gtggtatcatcatatgtacaagaccagagtgaagactgcctatacttaaacatctatgtc
ccaactgaagatgtaaaaagaatatccaaggaatgtgccagaaaacccggcaagaaaata
tgtagaaaaggaggtccccttacaaagaaacagacagatgatttaggtgataatgacggt
gctgaagatgaagatattcgggacagtgggggtcccaagccagtgatggtgtacatccat
ggtggctcttacatggaaggcactggaaatctgtatgatgggagtgtcttggcaagctat
ggcaatgtgatcgtcatcacagtcaactatcggcttggggtacttggtttcttgagcaca
ggggatcaggctgccaaaggaaactacgggctccttgacctcatccaggccctaagatgg
actagcgagaacattgggttctttggtggtgaccccttgcgaatcactgtgtttggatca
ggtgctgggggctcatgtgtcaacctgctgactttatcccattattctgaaggacttttt
caacgagcaatagctcagagtggaacagccctttccagctgggctgttagtttccagcct
gcaaaatatgctcgaatgttggccacaaaggttggctgcaatgtgtcagacacggtagag
ttagtggaatgcctacagaagaagccttacaaagaacttgtcgatcaagatgtgcaacca
gcccgataccatatagcctttggacctgtgatcgatggtgatgtaattccagatgatcct
cagatactcatggaacaaggagagttcctcaactatgacatcatgttaggagttaaccaa
ggggaagggttgaagtttgttgaaaatatagtagatagtgatgatggtatatcagccagt
gattttgactttgctgtttctaattttgttgataatttatatggatatcctgaagggaaa
gatgttttgagagaaaccataaaattcatgtatactgactgggctgatcgtcataaccct
gaaaccagaaggaagacgttgttggctttgtttacggaccatcagtgggtagcacctgct
gtggctacagcagaccttcactcaaacttcggttcacctacgtacttctatgccttctat
catcattgccaaacagatcaagtcccagcttgggctgatgcagctcatggagacgaggtt
ccctatgtgctggggatccccatggttggccctacagagttatttccttgcaatttctcc
aagaatgatgtgatgctgagtgcagtagtaatgacatattggacgaattttgctaaaacg
ggtgatccaaatcaaccagttcctcaagatacaaaattcattcataccaagcccaaccgc
tttgaagaagtagcatggaccagatattcccagaaagaccaactttatctccacattggc
ttaaaaccaagagtcaaagagcattacagagccaataaggtaaatctctggttggaactg
gtacctcatctgcataatctcaatgacatttctcagtatacctcgacaacaacgaaagtg
ccatccacagacatcactctcagaccgaccaggaaaaattccacacctgtcacgtcagcc
tttcctactgccaaacaggaagatcccaaacagcagccaagtcccttctcggtggatcag
agggactactccacagagctgagtgtcaccatcgccgtgggggcatctctgttgtttctg
aacatcttggctttcgctgctctgtactacaagaaggacaagcggagacacgatgtccac
cggaggtgtagccctcagcgcacagctaccaatgacctgacccatgctccagaagaggaa
atcatgtccctccaaatgaagcacactgacttggatcatgagtgtgagtccatccatcca
cacgaggtggttcttcggaccgcctgccccccagattataccctagcaatgaggaggtca
cccgatgatgttcctttaatgacaccaaacactatcacaatgattcccaacactatacca
gggattcagcccttacacacattcaacacatttactggaggacagaacaatacactgccc
cacccccacccccacccccattcacattcaacaaccagggtatag
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