Arvicola amphibius (Eurasian water vole): 119826431
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Entry
119826431 CDS
T08327
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119826431 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119826431 (Dhx36)
03012 Translation factors [BR:
aamp03012
]
119826431 (Dhx36)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119826431 (Dhx36)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119826431 (Dhx36)
Translation factors [BR:
aamp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119826431 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
AAA_22
HA2_N
AAA_19
nSTAND3
AAA_14
PhoH
ATPase
AAA_23
NPHP3_N
DUF6782
Motif
Other DBs
NCBI-GeneID:
119826431
NCBI-ProteinID:
XP_038203683
LinkDB
All DBs
Position
11:17648500..17683846
Genome browser
AA seq
1004 aa
AA seq
DB search
MSYDYHQSWSRDAGPRGSGPGSGGGGGGSRGPGGGGGGGGGGRGGRGRHPGHLKGREIGL
WYARKQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKDSEAQISWFAPEDHGY
GTEVSSEKKINSEKKLDNQEKKSLNQEKKTFRITDKTYIDRDSEYLLQENEPNGGLDQQL
LEDLQKKKSDPRYIEMQHFRKKLPSYGMQKELVNLINSHQVTVISGETGCGKTTQVTQFI
LDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQ
GSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRSDLKVIL
MSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKLRYVPEQKEHRSQFKRGFMQ
GHVNRQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLERMDDDKVDLNLIAALIRYIVL
EEEDGAILVFLPGWDNISTLHDLLMSQVMFKSEKFLIIPLHSLMPTVNQTQVFKKTPPGV
RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG
RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSN
EAVLLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS
LSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEY
FLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVA
KIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTE
VSPYCLLFFGGDISIQKDNGQEVIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIEHP
HPVDWDDTKSRDCAVLSAILDLIKTQEKAIPRNLTPRSQEGYYS
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgactaccaccagagctggagccgcgacgcggggccgcggggctccggcccg
ggctctggcggcggcggcggagggagccggggcccgggcggcggtggcggaggaggcggc
ggtggccgaggaggtcggggacggcatcccggacacctgaagggtcgcgagatcggcctc
tggtacgccaggaagcagacgcagaagaacaaggaggccgagaggcaggagagagccgtg
gtacacatggatgaacgacgagaagagcaaattgtgcagctattgaattccgtccaagct
aagaatgataaagattcagaagcacagatatcctggtttgctcctgaggatcatgggtat
ggtactgaagtgtcttcggagaaaaaaattaactctgagaagaaattagacaaccaggaa
aagaaatcgctgaaccaagaaaaaaagacttttaggatcacagacaaaacatacattgac
cgagattctgagtacttattgcaagaaaatgagccaaatggaggcttagaccagcaatta
ttggaagatttacaaaagaaaaaatccgaccctcggtatatagagatgcagcatttcaga
aaaaagctgccttcatatggaatgcaaaaggagctggtaaatttaatcaatagccatcag
gtaacagtaataagtggtgaaaccggctgtggcaaaaccactcaggttacgcagttcatc
ttggatgactacattgaaagaggaaaagggtctgcctgcagaatagtgtgtactcagcca
agaagaattagtgccatttcagttgctgagcgagtagctgcagaaagggcagagtcttgc
ggcaatggtaatagtactggataccagattcgtctccaaagtcggttgccaaggaaacaa
ggttctatcttatactgcacaacgggaatcattcttcagtggcttcaatcagactcgcgt
ttgtccagtgttagccatattgtacttgatgaaattcatgaacgaaatctacagtcagat
gttctaatgactgtcattaaagatcttctcaattttcgatctgacctgaaagtaatattg
atgagtgcaacactgaatgctgagaaattttcagaatatttcggtaactgtccaatgata
catatacctggtttcacttttccagtcgtggaatatcttttggaagatattattgaaaaa
ctaagatatgttccagaacaaaaagaacatagatcccagttcaagaggggtttcatgcag
ggtcatgtaaatagacaagaaaaagaggaaaaagaggcaatctataaagaacgttggcca
gcgtatataaaggaactgcgaacaagatactctgcaagtaccgtagatgttttggaaagg
atggatgatgataaagttgatctgaatttgattgctgcccttattcgatacattgttttg
gaagaagaggatggtgcaatactggtctttctaccaggctgggacaatatcagcacttta
catgatctcttgatgtcacaagtgatgtttaaatcagaaaaatttcttattataccttta
cattcattgatgcctacagtaaaccagacacaggtatttaaaaaaactcctcctggtgtt
cggaaaatagtaattgctaccaacattgcagagactagcatcaccatagatgatgtggtt
tatgtaatagatggaggaaaaattaaagagacacactttgacacacagaacaacatcagt
accatgtctgctgagtgggttagtaaagctaatgccaaacagaggaaaggaagagcggga
agagttcagcctggtcattgttatcatctgtataatggccttagagcaagtcttctagat
gactaccagctaccagaaattttgagaactcctttggaagaactttgtttgcaaataaag
attttaaggctaggtggaattgctcattttctgagtaggttaatggatccaccatcaaat
gaagcagtattgctctccataaaacacctaatggaactgagcgctttggataagcaagaa
gaattaacacctcttggcgtccatttggcccgattacctgttgagccacatattggaaaa
atgattctttttggagctttattctgttgcttagatccagtcctcactattgctgctagt
ctcagctttaaagatcccttcgtcattccattgggaaaagaaaagattgccgatgcaaga
agaaaggagttggcaaaagagactagaagtgatcacctgacagttgtaaatgcatttgag
ggttgggaagaagctaagcgacgtggtttcagatatgaaaaagactactgctgggaatat
tttctgtcttcaaacacgctgcagatgctgcacaacatgaagggacagtttgctgagcat
cttcttggagctggatttgtaagcagtagaagtcccaaagatcctaaagctaatataaat
tcagataatgagaagataattaaagctgtcatctgtgctggtttatatcccaaagttgct
aaaatccgactaaatttgggtaaaaaaagaaaaatggtaaaagttcacacaaagtctgac
ggtctggtttctattcatcctaagtctgtcaatgtggagcagacagacttccactataac
tggcttatctatcacctgaagatgaggacaagcagtatttacttgtatgactgtacagaa
gtttcaccatactgcctgctgttctttgggggagatatttccatccagaaagacaatggt
caggaagttattgctgtagatgaatggattgtgtttcagtctccagaaagaattgcccac
cttgtgaaggggctaagaaaggaactggatatcctcctgcaagagaagattgaacaccct
caccctgtagactgggacgacactaagtccagagactgtgcagtactgtcagctattcta
gacttgatcaaaacacaggaaaaggccattccaaggaacttgacaccacggtcacaggag
ggatattacagctga
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