Arvicola amphibius (Eurasian water vole): 119826433
Help
Entry
119826433 CDS
T08327
Symbol
Usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aamp01002
]
119826433 (Usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119826433 (Usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119826433 (Usp13)
Enzymes [BR:
aamp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119826433 (Usp13)
Peptidases and inhibitors [BR:
aamp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119826433 (Usp13)
Ubiquitin system [BR:
aamp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119826433 (Usp13)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119826433 (Usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_3
UBA_4
Motif
Other DBs
NCBI-GeneID:
119826433
NCBI-ProteinID:
XP_038203685
LinkDB
All DBs
Position
11:41337165..41444245
Genome browser
AA seq
858 aa
AA seq
DB search
MQRRGALFSVPSGGRKMAAGDLGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEGGL
YVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHMREKVRAASAGALPKRRNSKLFLDLDM
DDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPDTW
ENELPVSKYANNLAQLDNGVRVPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSAGGN
GHALEHFRDMGYPLAVKLGTITPDGADVYSFQEEGPVLDPHLAKHLAHFGIDMLHTNGTE
NGLRDNDIKPRVSEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQR
AYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQQN
GISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEERIQ
CCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELMRREAEANRRPLPELVRAKIPFS
ACLQAFAEPDNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPRKFDVS
IDMPDLLDISHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQLA
EMGFPLEACRKAVYFTGNTGAEVAFNWIIVHMEEPDFAEPLTIPGYGGAGASVFGATGLD
NQPPEETVAIITSMGFQRNQAVQALRATNHNLERALDWIFSHPEFEEDNDFVIEMENNAN
ANIVSEAKPEGPRIKDGSGMYELFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDHKVCAS
ERPPKDLGYMYFYRRIPS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcagcgtgccgagcggcggcaggaagatggctgcaggg
gacctgggcgagctgctggtaccgcacatgcccacgatccgcgtgcctaggtcaggggac
cgtgtctacaagaacgagtgcgccttctcctacgactccccgaactctgaaggtggactc
tatgtatgcatgaatacatttttggcctttggaagggaacacgttgaaagacattttcga
aaaactggacagagcgtatacatgcacctgaaaaggcacatgcgagagaaagtaagagca
gcatctgctggagccttacccaaaaggaggaattccaagttatttttagatctggatatg
gatgatgatttaaatagtgacgattatgaatatgaagatgaagccaaacttgttatattc
ccagaccactatgaaatagccctgccaaacatcgaggagttgccagccctggtaacgatc
gcttgtgatgcagtgctcagctccaagtcgccgtacaggaagcaggaccccgacacgtgg
gaaaatgaactgccggtatcgaagtacgccaacaacctcgcccagctggacaacggggtc
agggttcctcccagcggctggaagtgtgcccgatgcgacctgcgggaaaacctctggctg
aatctgaccgatggctctgttctgtgtgggaagtggtttttcgacagcgcagggggcaat
ggccacgcactggaacatttcagagacatgggctatcctctggccgtgaagctgggcacc
atcacacctgatggggcagatgtttattcttttcaagaagagggacctgttttggatcct
catttggccaaacacttagcacacttcgggattgacatgcttcatacgaatgggacagag
aatggactccgggacaatgacatcaagccaagagtcagcgagtgggaagtgatccaagag
tcagggactaagctgaagcccatgtatggaccagggtacacgggcctcaagaacctgggc
aacagttgctatctcagttctgtcatgcaggccatcttcagcatcccagagttccagaga
gcgtatgtgggaaacctcccaaggatattcgactactcgccgttagatccaacacaggac
ttcaacacacagatgactaaattggggcacggccttctctctggccagtactcgaagcct
ccagtaaagtccgagctcattgagcaagtgatgaaggaggaacacaagcctcaacagaac
gggatctccccacgcatgttcaaggcctttgtcagcaagagccatccagaattttcctct
aacagacagcaggatgcccaggagtttttcttgcacctggtcaatctggtagagaggaat
cgcattggctcagaaaacccaagtgacgttttccggtttttggtggaagagcgcattcag
tgttgtcagacccgcaaggtccgctatacagagagggtggactacctgatgcagttgcct
gtggccatggaggcagcaaccaacaaagatgagctgatcgcctatgaactgatgagaaga
gaagccgaagccaaccgaagaccccttccagagctggtgcgagccaagatccccttcagt
gcctgcctccaggcctttgccgagccagacaacgtggaggacttctggagcagtgccctg
caggcgaaatctgcaggggtgaaaacatctcgctttgcctcattccctgaatacttggta
gtgcagataaagaagttcacttttggtcttgactgggttcccagaaaatttgatgtttct
attgatatgccagacctactagatatcagccacctcagagccaggggcttacagccagga
gaagaggaacttccagacatcagtccccctatagtcattcctgatgactcaaaagatcgc
ctgatgaaccagttgatagacccctcagacattgatgagtcttccgtgatgcagctggct
gagatgggcttccctttggaagcttgccgcaaggctgtgtacttcactggaaacacagga
gccgaggtggccttcaactggatcattgtgcacatggaggaacctgattttgctgaacca
ctgaccatccctgggtatggaggggctggagcctctgtatttggtgctactggactggac
aaccaacctcctgaggaaactgtagctattatcacctccatgggatttcagcgcaatcag
gccgtgcaggccctgcgagccacgaatcataacctggaaagggcactggactggatcttc
agccaccccgagtttgaagaggacaatgacttcgtgatcgagatggagaacaacgccaat
gccaacatcgtgtctgaggccaagcctgaagggcccagaatcaaggatggatctggaatg
tacgagttatttgccttcatcagtcacatgggaacatctacaatgtgtggccattatgtt
tgccatatcaaaaaggagggacggtgggtgatctacaatgaccataaagtttgtgcctca
gaacggccccccaaagacctgggatacatgtacttttaccgtaggataccaagctaa
DBGET
integrated database retrieval system
