Arvicola amphibius (Eurasian water vole): 119826555
Help
Entry
119826555 CDS
T08327
Symbol
Rnf40
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119826555 (Rnf40)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119826555 (Rnf40)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
119826555 (Rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
119826555
NCBI-ProteinID:
XP_041910067
LinkDB
All DBs
Position
1:129752645..129769959
Genome browser
AA seq
1051 aa
AA seq
DB search
MAVKAPIAGPPLHLLGCKVTEVLPPPACRPRRAPSCPAATATGPLCLASANKRAAGDGGS
GPQRRSXTARRRPRTTLIEPIRLGGISSTEEMDSKVLQFKNKKLAERLEQRQACEDELRE
RIEKLEKRQATDDATLRIVNRYWAQLDETVEELFSDAIAPEGAVFRIRGAWVARRGLTRD
VIPRTDPGTSDLREPLPMQFRTPLSEPALAFVVALGASSSEEVELQLQGRMEFSKAAVSR
VVEASDHLQRQVEELCQRVYSRGDSEAPGEVARVRTRELGRENRRLQDLATQLQEKHHRI
SLEYSELQDKVTSTETKVLEMETTVEDLQWDIEKLRKREQKLNKHLAEALEQLNSGYYVS
GSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAELQGAVRTNERLKVAL
RSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLASKNSHLRHIEHMESDE
LGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHN
HQLKGDAQRYKRKLREVQAEIGKLRAQASGSSHCIPNLSHPDDSGLSALAPGKEDAGPGP
GGTPDSKKETASIPGTISAAASVKKEELVSSEDDAQAQATGTQGLPSRGREPEARPKREL
REREGPGLGPPPVASALSRADREKAKVEEAKRKESELLKGLRAELKKAQESQKEMKLLLD
MYKSAPKEQRDKVQLMAAERKAKAEVDELRGRIRELEERDRRESKKIADEDALRRIRQAE
EQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLREKDDANFKLMSERI
KANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQGSLGGVEKELTLRSQ
ALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIPAMPAGGSRAARRKRSFNLKRAQEDIS
RLRAQTRETAGRWMVYADADEILQEEIKEDRWDARLTCPCCNTRKKDAVLTKCFHVFCFE
CVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaaggctccaattgcaggtccacctctccatctcctgggctgcaaagtgacg
gaagtgctgcctccgcccgcctgtcggccccggagagccccgagctgccccgccgccacc
gccaccgggccgctatgtcttgcctcagccaacaagcgcgccgccggcgacgggggctca
ggaccccagagaagaagctgaaccgcgaggagaagaccacgaaccactctgatcgagccc
attcgtcttgggggcatctcttccacggaggagatggattccaaggtactgcagttcaag
aacaagaagctggcagagcgactggagcagcggcaagcctgtgaggacgagctccgggag
aggattgagaaactggaaaagaggcaggccactgatgacgccaccctccgcatcgtcaac
cgctactgggcccagctggatgaaactgtagaagagctcttctccgatgccatagcgcca
gagggagctgtcttcaggatcagaggcgcctgggttgccaggagggggctaacccgcgat
gtgatccctcgaacagacccagggacatcagatctgagggaacccctgccaatgcagttt
cgaacccctctcagtgagccagccttggcttttgtggtggcgctgggtgccagcagcagt
gaagaggtggagctgcaactgcagggacgcatggagttctccaaggctgccgtgtctcgg
gtggtagaggcctcagaccacctacaacgtcaggtggaagaactctgccagcgagtatac
agccggggggacagtgaggcccctggggaggtggcacgggtgcgcacccgggagctgggc
agagagaaccgtcgactacaggacttggccacccagctgcaagagaagcaccatcgcatc
tcactggagtactctgagctccaagataaagtgacatcaacagagaccaaggtcctggag
atggagacaacggtggaggacctgcagtgggacattgagaagctgcgcaagcgggagcag
aagctcaacaagcacttggcagaggccttggagcagctcaactctggctactacgtgtct
gggagctcctcgggttttcagggaggccagatcacacttagcatgcagaagtttgagatg
ttgaacgcagagctggaagaaaatcaggaattggccaatagccgcatggcagaactagag
aagcttcaggctgagcttcagggggctgttcggaccaatgagcgtctcaaggtggccctg
cggagtcttcccgaggaggtagttcgagagacaggggagtaccgcatgctgcaggcccag
ttttcactcctctacaatgagtctttgcaagtgaagacgcagctagatgaggcccggggg
ctgctgctggcctccaagaactctcacttgagacacatcgagcatatggagagtgatgaa
ctggggctgcagaagaaactgcgcaccgaagttatccagctggaagataccctggcccag
gtacgcaaggagtatgagatgctgcgcattgagtttgaacagaaccttgcggccaacgag
caggctgggcctatcaaccgtgagatgcgccacctgatcagcagtcttcagaaccacaat
caccagctaaaaggggatgcccagcgatacaagcggaaacttcgagaagtacaggctgag
attggcaaactccgggcgcaggccagtggctcttcccattgcatccccaacctcagccac
ccagatgactctggcctcagtgccctagccccagggaaagaagatgctgggccaggtccc
ggaggtacccctgacagcaaaaaggagacagcttcaatacctggaaccatctctgctgct
gcttcagtgaagaaggaggagctggtctcctctgaagatgatgcccaggcccaagccact
ggaacccagggcttgccctcccggggccgagaacccgaggccagacccaagcgagaactt
cgggaacgggaagggcctggtctggggcccccacctgtagcctcagctctctcaagggct
gatcgagaaaaggccaaggtggaggaagccaagaggaaagagtcagaactgctcaagggt
ctccgagcagagctcaagaaggcccaagaaagccagaaggagatgaagctgctgttggac
atgtacaagtcagcgcccaaggagcagcgggataaggtgcagctcatggcagccgagcgg
aaggccaaggctgaggtggatgagcttcggggtcgcatccgagaactggaggaaagagat
cgaagagagagcaagaagattgcggatgaggatgccctgcggcgaatccggcaggcggag
gagcagattgaacacctgcagcgtaaactgggtgccaccaagcaggaggaggaggcactg
ctgtcagagatggatgtgaccgggcaggcttttgaagacatgcaggagcagaacgggcga
ctgttgcagcagctgcgggaaaaggatgacgccaactttaagctcatgtcagagcggatc
aaggccaaccagattcacaagctgctccgcgaggagaaggatgagttgggcgagcaggtt
cttggcctcaagtctcaggtggatgcccagctgctgacggtgcagaagcttgaggagaag
gagcgggccctgcagggcagccttggtggtgtagagaaggagctgacgttgcgcagccag
gccctggagcttaataagaggaaggctgtagaagcagcccagttggctgaggacctgaag
gtacagttggagcacgtgcagactcgacttcgagaaatcccagccatgcctgccggcggg
agccgagctgcccggagaaagaggagcttcaatctcaagagggctcaggaggacatttcc
cggctgcgggcgcaaactagagaaacagcgggaaggtggatggtctatgcagatgctgat
gagatcctgcaggaggagatcaaggaggataggtgggatgcacgcttgacctgcccctgc
tgcaacacccgcaagaaggatgcagtgctgaccaagtgcttccacgtattctgcttcgag
tgcgtgcgtggccgctatgaggcccgccagaggaagtgtcccaagtgcaacgcagccttt
ggtgcccatgacttccaccgtgtatacatcagctga
DBGET
integrated database retrieval system
