Arvicola amphibius (Eurasian water vole): 119826566
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Entry
119826566 CDS
T08327
Symbol
Cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
119826566 (Cdh17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119826566 (Cdh17)
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Major cadherins
119826566 (Cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Syndecan
Motif
Other DBs
NCBI-GeneID:
119826566
NCBI-ProteinID:
XP_038203882
LinkDB
All DBs
Position
11:118626807..118685523
Genome browser
AA seq
829 aa
AA seq
DB search
MASAWRHFLCLLTLYLAGGRGQEGKFSGPLKPMTFSIFEGQEPSQIIFQFKANSPAVKFE
LTGETDDIFMIEDGLLYYTKALDRETRAVHHLQLAALDSQGNIVEGPVPITIEVKDINDN
RPTFLQSKYEGSVRQNSRPGKPFMYVNATDLDDPNTLNGQLFYQIAIQLPLVNNVMYFQI
NNKTGGISLTQEGSQELDPAKNSFYSLVVSVKDMGGQSENSFSHTTSVDITVKENIWKAP
EQVEITENSTEPHPIKITQVQWNDPGAYYSLINKEKLPQFPFSIDQEGNIYVTQPLDREE
KESHVFYATAKDESGKPLAYPVEVHVKVIDINDNPPICPAMTVFEVQENEPVGSSIGYLS
ASDMDEANTVNSILKYKLVDQTPKVPSDGLFLIQEYEGKVQLGKRSLRKQDNPQYNLTVE
VTDKDFHTLCFVEVHVIDINDQIPIFKVSDYGNMTLPEDTAIGSTILVIEATDADEPFTG
SSKILYKIVEGDPEGRLEVITDPQTNAGYVTIKQALDFEAQPVANIVFKAENPEPLVSGV
SYNASSYASFRLTVTDVNEAPVFPQLIFQAKVSEDAAVGTSLGNVTARDPEGLAMRYSLS
GDKRGWLKIDSVTGEIFSAAPLDRETESLYRVRVVATEKGGSSLSSVADFHLALTDVNDN
PPRLAKEYTGLFFCHPLSAAESLIFEVTDDDQQSRWRSQFTFALGRESLKNDWQVSKING
THARLSTKHTRFEKGVYEIPILLSDEGKPPMEGTVSLSVTFCQCVEGSCFRPAASHDGIP
TVGMAVGILLTTLLVIAGILAVVFYRMKKDEGKGNAENPQSPEARPLRS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcctggcgccacttcctgtgtcttctcacactttatttggcgggcggccgt
ggccaagaggggaagttcagcggtcccctgaagcccatgaccttctctatttttgaaggc
caagaaccaagccaaatcatcttccagtttaaggccaacagtccagctgtgaaatttgag
ctaacaggggagacggatgatatctttatgatagaagatggacttctgtattacaccaaa
gccctggacagagaaaccagggctgttcatcacctccagcttgcagccctggattctcaa
ggaaacatagtggagggcccagtccccatcaccatagaagtcaaggacatcaatgacaac
cgacccacgtttctccagtcaaaatatgaaggctcagtgaggcagaactctcgcccagga
aagcctttcatgtatgtcaatgccacagacctggatgatccaaacactcttaatggccag
cttttttatcaaattgccattcagcttcccttggtcaacaatgtcatgtactttcagatc
aacaacaaaactggaggaatatcgctcacccaagaaggatcccaggaactggatccagct
aagaactctttctacagcctggtggtctccgtgaaggacatggggggccagagtgagaat
tccttcagtcacaccacatctgtggacatcactgtgaaggagaacatctggaaagcaccg
gaacaggtggagattaccgaaaactcaacggagccacaccccatcaaaatcacccaggtg
cagtggaatgacccgggggcttattattccttaatcaacaaggagaagctgccgcagttc
ccattctccattgaccaggagggaaatatttatgtgactcaacccttggaccgagaggaa
aaggaatcacacgttttctatgcgactgccaaggacgagagtggaaaaccacttgcatac
cccgtggaagttcatgtgaaagttatcgacattaatgacaacccaccaatatgtccggct
atgactgtgtttgaagtccaggagaatgaaccagtgggaagcagcatcgggtacttgagt
gccagcgacatggatgaagccaacactgtcaacagtattctgaagtacaaacttgtagac
caaacccccaaagttccctcagacggactctttctcattcaagaatacgagggaaaggtt
cagctggggaaacgctccctgaggaaacaagacaaccctcagtacaacttgacagtagag
gtgactgacaaagatttccataccctctgttttgtggaagtccacgttatcgatatcaac
gatcagattcccatcttcaaagtatcagactatggaaacatgactctccctgaagacacg
gccattggatccaccatcctggtcatcgaagccactgatgcggacgaaccctttaccggg
agttctaaaatcctctacaagattgtagagggagatcccgaggggagactggaagtcatc
acagacccccagaccaatgccggatacgtcaccattaaacaggctctcgattttgaagcc
caaccggttgccaacattgtgttcaaagcagaaaaccctgagcccctggtgtccggtgta
tcttacaatgccagctcttatgcctcattcaggctgactgtgacggatgtgaatgaagcg
cctgtgtttccccaacttatattccaagcaaaagtcagtgaggatgctgctgtaggcacc
agcctgggcaatgtgactgccagagaccccgaaggcctggctatgagatattccctgagc
ggcgataagagaggctggcttaaaatcgactccgtcaccggggagatatttagtgcggct
ccgctggacagggaaacagaaagtctgtatcgggtacgcgtcgtggccactgaaaaaggt
gggtcctctttgagctccgtggcagatttccacctggccctcacagatgtgaatgacaac
cccccacgcctagctaaggagtacaccggcttgttcttctgccatcccctcagtgctgcg
gagagtctcatctttgaggtcactgacgacgaccagcagtcacgttggaggtcccagttc
acattcgctcttggcagagaaagcttaaaaaatgactggcaagtttccaaaatcaacggt
actcatgctagactctccaccaagcacacacgcttcgagaaaggtgtttatgagatcccg
attctcctaagcgatgagggaaagccacccatggaaggcacggtctccttatcagttact
ttctgccaatgtgtggaaggaagctgtttccggccagcagccagccacgatgggataccc
acagtgggcatggcagtcggtatacttctgaccaccctcctggtcattgctgggattcta
gcagtggtgttctaccgcatgaagaaagacgaagggaaggggaatgctgaaaaccctcag
tcccccgaagccagacctctgagaagctga
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