Arvicola amphibius (Eurasian water vole): 119827215
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Entry
119827215 CDS
T08327
Symbol
Sox13
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119827215 (Sox13)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119827215 (Sox13)
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Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
119827215
NCBI-ProteinID:
XP_038204560
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All DBs
Position
12:86653245..86698785
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AA seq
614 aa
AA seq
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MSMRSPVSVQLALDSASTMVNCTIKSEEKKEPPHEAPQGTATAVEPQPGDPALAPQEAAN
SRAPAQDCTSPESSGSPDPKRPAASEAASGSQERLDFNRNLQEVVPAIEKLLSSDWKERF
LGRSSMEAKDVKGTQESLAEKELQLLVMIHQLSALRDQLLTAHSEQKNMAAMLFEKQQQQ
MELARQQQEQIAKQQQQLIQQQHKINVLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQL
ALPIQPIPCKPVEYPLQLLHSPPAPVVKRAGVTAHHPLQVPPQPLNLTAKPKAPELPNTS
SSPSLKMNSCGPHPSNHGAPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHSHSGAL
ENSPNPPFRKDLISLDSSPAKERPEESCVHPLEEAMLSCDMDGTRHFSESRNSSHIKRPM
NAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKY
PDYKYKPRPKRTCVVEGRRLRVGEYKALMRTRRQGARQSYAIPPQAGQAQVSSSDVLFPR
AAGMPLAQPLVEHYVPQGLDPNMPVIVNTCSLREEGEGTDDRHSVADGEMYRYSEDEDSE
GEAKSDGELVVLTD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcggagccccgtctctgtgcagctggccctggatagtgctagcaccatggtg
aactgcaccatcaagtctgaagagaagaaggagcctccccacgaggccccccaaggcaca
gccactgcggtggagccccagcctggagacccagccctggctccgcaggaagccgccaac
tcacgagctccagctcaggactgtacctcaccagagagcagtgggtccccagaccccaag
agaccagcagcttctgaggccgcttcgggaagccaggagcggttggacttcaaccgcaac
ttacaagaagttgtgccagccattgagaagctgctgtccagcgactggaaggagcggttc
ctgggaagaagctctatggaagccaaggatgtcaaagggacccaagagagcctggctgag
aaggagcttcagcttctggtcatgattcaccagctgtccgcccttcgggaccagctcctc
acagctcactccgagcagaagaacatggcagccatgctgtttgagaagcagcagcagcaa
atggaactggcccggcagcagcaggagcagatcgccaagcagcagcagcagctgattcag
cagcagcacaagatcaacgtcctccagcagcagatccagcaggttaacatgccttacgtc
atgattccagcctttcccccaagtcaccagccactgcctgtcacccctgactcccagctg
gctttgcccatccagcccattccctgcaaaccagtggagtacccgctgcagctgctgcac
agccctcctgcccccgtggtgaagagagccggggtgaccgcccaccacccccttcaggtc
cccccccagccattgaacctcacagccaagcccaaggcacctgagctgcccaacacctcc
agctcccccagcctcaaaatgaacagctgtgggccgcacccctctaatcacggggctccc
acaagggacctgcagtccagcccccccagcctgcctctgggcttccttggtgaaggggat
gctgtcaccaaagccatccaggatgctcgccaactgctgcacagccacagtggggccttg
gaaaactcccccaaccccccattccgcaaggacctcatcagcttggactcatccccagcc
aaggaaaggccggaggagagctgtgtgcacccgctggaggaagccatgctgagctgcgac
atggacggcacccgccatttctctgagtcccggaacagcagtcatatcaagagacccatg
aatgccttcatggtgtgggccaaggatgagcggaggaaaattctccaggccttcccagac
atgcacaactccagcatcagcaagattcttggctctcgctggaagtccatgacaaaccaa
gagaagcagccctactacgaggagcaggcccgcctgagccggcagcacctggagaaatat
cctgactacaagtacaagccgaggcctaagcgcacctgcgtcgtggagggacggcggctg
cgcgtgggcgagtacaaggccctgatgagaacacggcgccagggtgctcgccagagctac
gccatccccccgcaggctggccaggcacaggtgagctcctcagatgtcctgttccctcgg
gcagcaggcatgcccctggcacaaccattggtggagcactatgtcccccagggcctggac
cccaacatgcccgtcatcgtcaatacctgcagcctccgggaggaaggggagggcacagat
gacaggcactcagtggctgatggagagatgtaccggtacagcgaggacgaggactcagag
ggcgaagcgaagagtgatggggaactggtggtccttacagactga
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