Arvicola amphibius (Eurasian water vole): 119827361
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Entry
119827361 CDS
T08327
Symbol
Nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119827361 (Nisch)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
119827361 (Nisch)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_14
LRR_NXF1-5
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
119827361
NCBI-ProteinID:
XP_038204928
LinkDB
All DBs
Position
12:24819238..24854122
Genome browser
AA seq
1505 aa
AA seq
DB search
MAAAALSFGPEREAEPAKEARVVGSELVDTYTVYIIQVTDGNHEWTIKHRYSDFHDLHEK
LVAEKKIDRTLLPPKKIIGKNSRSLVEKREKDLEVYLQTLLATFPDVAPRALVHFLHFHF
YEINGITAALAEELFEKGEQLLGAGEVFAIRPLQLYAVTEQLQQGKPTCASGDAKTDLGH
ILDFTCRLRYLKVSGTEGPFGTSNIQEQLLPFDLSIFKSLHQVEISHCDAKHIRGLVTSK
PTLATMSVRFSATSMKEVLVPEASEFDEWEPEGTALEGPVTAIIPTWQALTTLDLSHNSI
SEIDESVKLIPKIEYLDLSHNGVLVVDNLQHLYNLVHLDLSYNKLSSLEGVHTKLGNVKT
LNLAGNFLESLSGLHKLYSLVNLDLRDNRIEQLEEVKSIGSLPCLEHVALLNNPLSIIPD
YRTKVLSQFGERASEICLDDAATTEKELDTVEVLKAIQKAKDVKSKLSNTEKKVGEDTRL
PAAPCVRPSSSPPTAAPTSASLPQPILSNQGIMFVQEEALASSLSSTDSLPPEDRPIAQD
CSDSLESIPTGQVASEDLRDVPGAVGGASPEHAEPEVQVVPGSGQIIFLPFTCIGYTATN
QDFIQRLSTLIRQAIERQLPAWIEAANQREEAQGEQGEEEEEEEEEDVAENRYFEMGPPD
IEEEEGSGQGEEEDEDEEDEEAEEERLALEWALGADEDFLLEHIRILKVLWCFLIHVQGS
IRQFAACLVLTDFGIAVFEIPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPELCLV
LKVRHSENTLFIISDAANLHEFHADLRSCFAPQHMAMLCSPILYGSHTTLQEFLRQLLTF
YKVDGGAQERSQGCFPVYLVYSDKRMVQTAAGDYSGNIEWASCTLCSAVRRSCCAPSEAV
KSAAIPYWLLLTPQHLNVIKADFNPMPNRGTHNCRNRNSFKLSRVPLSTVLLDPTRSCTQ
PRGAFADGHVLELLVGYRFVTAIFVLPHEKFHFLRIYNQLRASLQDLKTIVISKKPASRP
RSQSSLVNGQRAKGRARCSDEQRPREAPAQAPATVPAAAPASVPAAVLAPAPVPAAAPAE
SSAPAEAPAPAEAPAPAEAQAEAPAQYPSERLIQSTSEENQIPSHLPVCPSLQHIAGLQG
SAIIDLFHSSIAEVENEELRHLLWSSVVFYQSPGLEVTACVLLSTKAVYFVLHDGLRRYF
SEPLQDFWHQKNTDYINSPFHISQCFVFKLSDLQSVNVGLFDQYFRLTGSSPTQVVTCLT
RDSYLTHCFLQHLMLVLSSLERTPSPEPVDKDFYSEFGDKNTGKMENYELIHSSRVKFTY
PSEEEVGDLTYIVAQKLADPGKAPSLSILLYVQAFQVVTPQPGRNRGPLRPKTLLLTSAE
IFLLDEDYIHYPLPEFAKEPPQRDRYRLDDGRRVRDLDRVLMGYQPYPQALTLVFDDMQG
HDLMGNVTLDHFGEMPGYPGRAGQGREVQWQVFVPSAESREKLISLLARQWEALCGRELP
VELTG
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgctcagcttcgggcccgagcgggaggccgagccggccaaggaggcg
cgcgtcgtgggttccgagctcgtggacacgtacacggtttatatcatacaggttactgat
ggcaaccacgagtggacaatcaagcaccgttatagtgacttccatgacctgcatgaaaag
cttgttgcagagaagaaaattgacagaactctccttccacccaaaaagataattggaaag
aactcacgaagcttggtagagaagcgggagaaggacctggaggtgtacctccagaccctc
ctggccaccttccctgatgtggcccccagagctctggtccacttcttgcatttccacttc
tatgaaataaacggcatcactgcagcactggctgaagagctctttgaaaaaggagaacag
cttctaggagccggtgaggtctttgccatcaggcccttgcagctctatgctgtcacggag
cagctacaacaaggaaagcctacttgtgccagtggagatgccaagactgaccttgggcac
atcctagacttcacctgtcgccttaggtaccttaaggtttctggcacagaaggacctttt
gggaccagcaacattcaggagcagctcctgccctttgatctttctatattcaagtctctt
catcaggtagagataagtcattgtgatgctaagcatatccgagggctggtcacctccaag
ccaacattagccacaatgagtgtcagattctcagcaacttcaatgaaggaagtacttgtt
cctgaagcctcagaatttgatgagtgggagcctgaaggcacagcccttgaaggccctgtg
actgctatcatccctacatggcaagcattgaccactctagacctgagccacaacagcatc
tctgagatcgacgaatctgtgaaactgatcccaaagattgagtacctggacctgagtcac
aacggagtgctagttgtggacaacctacagcacctgtacaacctcgtccaccttgacctg
tcctacaacaagctctcctccctggaaggcgtgcacactaaactaggcaatgtcaaaacc
ctaaacctggcgggcaacttcctagagagtctgagtggcctgcacaaactctactctctg
gttaatctggacctccgagacaacaggattgagcagttggaggaggtcaagagcataggc
agcctaccatgtctagagcatgtggccttactgaacaaccctctgagcatcatccctgac
taccggaccaaggtgctctcccagtttggagagcgagcctctgagatctgtctagatgat
gcagcaaccacagagaaggagctggacactgtggaagtactgaaagccattcagaaagcc
aaggatgtcaagtccaaactgagcaacacagaaaagaaggttggtgaggacacccggctc
ccagctgctccctgtgtaagacccagcagctcccctcccactgcagctcccacctcagcc
tccctgcctcagcctatcctctccaaccaaggaatcatgtttgtccaggaggaggccctg
gccagcagcctctcatccaccgacagtttaccccctgaggaccggcccattgcccaagac
tgttccgactccttggaatctatccccacaggacaggtggcatctgaagacttaagggat
gtgccaggagctgttggtggtgcaagcccagaacatgcagagccagaggttcaggtggtg
cctgggtcaggccagatcatcttcctgcccttcacttgcatcggctacacagctaccaac
caggacttcatccagcgtctgagcacactgatccgccaggccattgaacggcaactccct
gcctggattgaggctgccaaccaacgagaggaagcccagggtgaacagggtgaggaggag
gaagaagaggaagaggaggatgttgctgaaaaccgctacttcgaaatgggacccccagac
atagaggaagaggagggcagtggccagggagaagaggaggatgaggatgaggaggatgag
gaagctgaggaggaacgcctggctctcgagtgggccctcggcgctgacgaggacttcctg
ctggagcacattcgcatcctcaaggtgctgtggtgcttcctgatccacgtgcaaggcagc
atccgccagtttgctgcctgccttgtgctcactgactttggcatcgctgtcttcgagatc
ccacatcaagagtcacgaggcagcagccaacacatcctttcatccctgcgtttcgtcttc
tgcttcccacatggcgacctcactgagtttggcttcctcatgccagagctgtgcctggta
ctcaaggtgcggcacagtgagaacacactcttcatcatctcggatgctgccaacttgcat
gagttccatgctgacctgcgctcctgctttgcacctcagcacatggccatgctgtgcagc
cccatcctctatggcagccacaccaccctgcaggagttcttacgccagctgctcaccttc
tacaaggtggatggtggtgctcaggagcgcagccagggctgcttccctgtctacttggtc
tacagtgacaagcgcatggtccagacagctgctggggactactcaggcaacatcgaatgg
gccagctgcacactctgctcggcagtgcggcgctcctgctgtgcgccctctgaggccgtc
aagtctgccgccatcccctactggctgctgctcactccccagcatctcaatgtcatcaag
gccgacttcaaccccatgcccaaccgaggcacccacaactgccgcaaccgcaatagcttc
aagcttagccgcgtaccgctctccactgtgctgctagaccctactcgcagctgcacccag
ccacggggagcctttgctgatggccatgtccttgagctgctggttggctaccgctttgtt
actgccatctttgtgctgccccatgagaaattccacttcctgcgaatctacaatcagctt
cgggcctccctgcaggatctgaagactattgtcatctccaagaagcccgcatccaggcca
agatcccagagttctctcgtgaatggtcagcgtgccaagggcagggccagatgtagtgat
gagcagcgaccacgggaggccccagcacaagctcctgctacagttcctgctgccgctcca
gcttcagttcctgctgcagttctggctccagctccagttcctgctgcagctccagcggag
tcttcagctccagcagaggctccagctccagcagaggctccagctccagcggaggcacaa
gctgaggcccctgcccagtacccaagcgagcgcctgatccagtccacatctgaggagaat
cagatcccttctcacttgccggtctgcccgtcactccagcacattgccggtcttcagggg
agcgccatcattgatctcttccacagcagcattgctgaggttgaaaacgaggagctgagg
cacctcctgtggtcgtcagtggtgttctaccagagcccaggactggaggtgaccgcctgt
gtgctgctctccaccaaggctgtgtacttcgtgctgcatgatggcctccgccgctacttc
tcagaaccactgcaggatttctggcatcagaaaaacacggactatatcaacagtcctttc
cacatctctcaatgctttgtgttcaagctcagtgacctgcagtcagtcaatgttggcctt
ttcgaccagtacttccggctgactggttcctccccaacgcaagtggtcacatgcttgact
cgtgacagctacctgacacactgcttcctccagcacctcatgctcgtgctctcctcgctg
gagcgcacgccctcccctgagcctgttgacaaggacttctactcagaatttggggacaag
aacacaggaaaaatggagaactacgagctgatccattccagccgtgtcaagttcacctac
cccagtgaggaagaggttggggacctgacctatatcgtggcacagaagttggctgatcct
ggaaaggctccatccctcagcatcttactgtatgtccaggccttccaggtggtcacacca
cagcctggacggaacaggggcccactgcgccccaagacactcctgctcaccagtgctgag
atctttctcctagatgaggactatatccactatccgttgcctgaatttgccaaagagcca
ccacagagggacagataccggctagatgatggccgccgtgtccgggatttggaccgggta
cttatgggctaccagccctacccacaggccctcactcttgtgtttgatgacatgcagggt
cacgacctcatgggcaacgtcaccctggaccactttggggagatgccaggttatcctggc
agggctggccagggccgggaggtgcagtggcaggtgtttgtccccagtgctgagagccgg
gaaaagctcatctcgctgctagctcgtcagtgggaggccctttgtggcagggagctgcct
gtggagctcactggctag
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