Arvicola amphibius (Eurasian water vole): 119827366
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Entry
119827366 CDS
T08327
Symbol
Cacna1e
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04010
MAPK signaling pathway
aamp04020
Calcium signaling pathway
aamp04930
Type II diabetes mellitus
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119827366 (Cacna1e)
04020 Calcium signaling pathway
119827366 (Cacna1e)
09160 Human Diseases
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
119827366 (Cacna1e)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aamp04040
]
119827366 (Cacna1e)
Ion channels [BR:
aamp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119827366 (Cacna1e)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119827366
NCBI-ProteinID:
XP_038204938
LinkDB
All DBs
Position
12:66815400..67121421
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AA seq
2314 aa
AA seq
DB search
MARFGEAVVVGRPGSGDGDSDQSRNRQGTPVPASGPAAAYKQSKAQRARTMALYNPIPVR
QNCFTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTP
MSRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTH
FNTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIG
LEFYSGKLHRACFMNNSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAV
LTVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE
RVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNAGTSALEVLRRATIKRSR
TEAMTRDSSDEHCVDISSVGTPLARASIKSTKVDGASYFRHKERLLRISIRHMVKSQVFY
WIVLSVVALNTACVAIVHHSQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSS
FNCFDFGVTVGSIFEVVWAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSS
MKSIISLLFLLFLFIVVFALLGMQLFGGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDW
NEVMYNGIRSQGGVSSGMWSAIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEE
EEAFNQKHALQKAKEVSPMSAPNMPSIERDRRRRHHMSMWEPRSSHLRERRRRHHMSVWE
QRTSQLRRHMQMSSQEALNKEEAPPMNPLNPLNPLSPLNPLNAHPSLYRRPRPIEGLALG
LGLEKCEEERISRGGSLKGSVGGLTSALDNQRSPLSLGKREPPWLPRSCHGNCDPTQQEA
GGGETVVTFEDRARHRQSQRRSRHRRVRTEGKESASVSRSRSASQERSLDEGLSIEGEKE
HESQGSHRSKEPTIHEEERTQDLRRTNSLMVPRGSGLVGALDEAETPLVQPQPELEVGKD
AALAEQEAEGSSEQALLGDVQLDVGRGISQSEPDLSCMTANMDKVTTESTSVTVAIPDVD
PLVDSTVVHISNKTDGEASPLKEAETKEEEEEVEKKKKKEKRETGKAMVPHSSMFIFSTT
NPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDYVFTGVFTF
EMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDIKTIKSLRV
LRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCT
DSSKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQ
HSVDVTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSL
EKNERACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKY
YSAPCTYELALKYLNIAFTMVFSLECVLKVIAFGFLNYFRDTWNIFDFITVIGSITEIIL
TDSKLVNTSGFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFF
IYAIIGMQVFGNIKLDEESHINRHNNFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCE
PDTTAPSGQNESERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPH
HLDEFVRVWAEYDRAACGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAE
DMTVHFTSTLMALIRTALDIKIAKGGADRQQLDSELQKETLAIWPHLSQKMLDLLVPMPK
ASDLTVGKIYAAMMIMDYYKQSKVKKQRQQLEEQKNAPMFQRMEPSSLPQEIIANAKALP
YLQQDPASGLSGRSGYPSMSPLSPQEIFQLACMDPADDGQFQEQQSLEPEVSELKSVQSS
NHGIYLPPDTQKHAGSGRASSMPRLTMDPQVVTDPSSMRRSFSTIRDKRSNSSWLEEFSM
ERSSENTYKSRRRSYHSSLRLSAHRLNSDSGHKSDTHRSGGRERGRSKERKHLLSPDVSR
CNSEERGTQADWESPERRQSRSPSEGRSQTPNRQGTGSLSESSIPSISDTSTPRRSRRQL
PPVPPKPRPLLSYSSLMRHTGGISPPPDGSEGGSPLASQALESNSAGLTESSNSLHPQQG
RHSSPQHYISEPYLALHEDSHASDCGEEETLTFEAAVATSLGRSNTIGSAPPLRHSWQMP
NGHYRRRRRGGPGPGMMCGAVSDLLSDTEEDDKC
NT seq
6945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggggaggcggtggtcgttggcaggccgggctcaggcgatggagactcg
gaccagagcaggaaccgacaaggaacccctgtaccggcctcggggccggcagccgcctac
aagcagtcgaaagcgcagagggcgcggactatggctttgtacaaccccattcctgtccgg
cagaactgtttcacggtcaacagatccctgttcatcttcggagaagataacattgtcagg
aaatacgccaagaagctcatcgattggccgccatttgagtacatgatcctggccaccatt
attgccaactgcatcgtcttggccctggagcagcatcttcctgaggatgacaagaccccg
atgtcccgaaggctggaaaagacagaaccatatttcattgggatcttctgctttgaagct
gggatcaaaattgtggctctaggtttcatcttccataagggttcatacctccgcaatggc
tggaatgtcatggacttcattgtggtcctcagtggcatcctggccactgcaggaacccat
ttcaacacccatgtggatttgcggaccctccgtgctgtgcgtgtcctgaggcccttaaag
ctcgtgtcaggaatacctagcctgcagattgtgttgaagtccatcatgaaggccatggtg
cctctgctgcagattggccttctgctcttctttgccatcctcatgttcgccatcattggc
ttggagttctacagtggcaagttacatcgagcatgcttcatgaacaattcaggtattcta
gagggatttgatcctccccacccatgcggtgtgcaaggctgcccagctggttacgaatgt
aaggactggatcggccccaatgacgggatcacccagtttgacaacatcctttttgctgtg
ctgactgtcttccagtgcatcacgatggaagggtggaccactgtgctgtacaataccaat
gatgccttaggagccacctggaattggctgtacttcatccccctcatcatcattggatcc
ttctttgttctcaaccttgtcctgggagtgctttcaggggaatttgccaaagaaagagag
agagtggagaaccggagagcattcatgaagctgcggcgccagcaacagattgagagagag
ctgaatggctaccgtgcctggatagacaaagcagaggaagtcatgcttgctgaagaaaat
aaaaacgccggaacatcagccttggaagtgcttcgaagggcaaccatcaaaaggagccgg
acggaggccatgacccgagactccagcgatgagcactgcgttgatatctcttctgtgggc
acacctcttgccagagccagtatcaagagcacaaaggtagatggagcctcctatttccgg
cacaaggaacggcttctgcgtatctctatccggcacatggtcaaatcccaagtgttttac
tggatcgtcttgagtgttgtggctctcaatactgcctgtgtggctattgtccatcacagc
caaccccagtggctcactcacctcctctactatgcagaatttttgtttctgggacttttt
ctgttggagatgtccctgaagatgtatggcatggggccacgcctttattttcattcctca
ttcaactgcttcgattttggggtcacagtgggcagcatctttgaggtggtctgggcaata
ttcagacctggtacatcttttggaatcagtgtcttacgagctctccgactcctaaggata
tttaaaataaccaagtattgggcatccctcaggaatctggttgtctccttgatgagctcc
atgaagtctattatcagcttgctcttcctgctcttcctcttcatcgttgtcttcgctctc
ctaggaatgcagctctttggaggcaggtttaactttaatgatgggactccttcagctaat
tttgacaccttccctgcagctatcatgacagtgttccagatcctgacgggggaagactgg
aatgaggtgatgtacaatggcatccgctcccagggtggggtcagctcgggcatgtggtct
gccatctacttcattgtgctcaccttgtttggaaactacacactgctgaacgtattcttg
gccattgctgtggacaatctggccaatgcccaggaattaacgaaggacgaacaggaggag
gaagaagccttcaaccagaagcatgcactgcagaaggccaaggaggttagcccgatgtct
gcacccaacatgccttctattgaaagagacagaaggagaagacaccacatgtcgatgtgg
gagccgcgcagcagccacctgagggagcggaggcgccggcaccacatgtctgtatgggaa
caacgcaccagccagctgaggaggcacatgcaaatgtctagccaagaagccctcaacaaa
gaggaggccccaccgatgaaccccctcaatccactcaatccactgagccctctcaaccca
ctcaacgctcaccccagcctctatcggagacccagacccattgagggcctagccctgggc
ctgggtcttgaaaagtgtgaagaagagcgcattagccgcgggggttccctcaagggcagt
gtagggggcctgaccagtgccctggacaaccagaggagccccttgtccttgggaaaacgg
gagccaccgtggctgcccagatcctgtcatggaaactgtgacccaacccagcaggaagct
gggggaggagagaccgtggtgacttttgaggaccgagccaggcataggcagagccagagg
cgtagccgccatcgccgcgtcaggactgagggcaaggagtctgcctccgtgtcccgaagc
aggtcggccagccaggagcggagtctggatgaagggttgtccattgagggagagaaagaa
catgaatctcagggcagccacagaagcaaggagccgaccatccatgaagaggaaagaact
caggacttgaggaggaccaacagtctgatggtacccaggggctctggactggtaggagct
cttgatgaggcagaaactcctctagtccagccccagcctgagttggaagtggggaaggat
gcggctctggcagagcaggaagctgaaggcagcagcgagcaagccctgcttggggacgtc
cagctggatgtgggccggggcattagccagagcgagcctgacctctcctgcatgacagcc
aacatggacaaggttaccaccgagagcaccagcgtcacggtcgccatccctgatgttgac
cccttggtggattcaacagtggtgcacattagcaacaagactgatggagaagccagtccc
ttgaaagaggcagagaccaaagaggaagaagaagaggtggagaagaaaaagaagaaggag
aagcgagagactggcaaagccatggtgccccatagctctatgttcatcttcagcaccact
aacccgatccgtagggcctgccactacattgtgaacctacgctactttgagatgtgcatc
ctcctggtgattgcggccagcagcattgccctggcagccgaggaccctgtcctgaccaat
tcggagcgcaacaaagtcctgagatatttcgactatgttttcaccggcgtgtttaccttt
gagatggttataaagatgatagaccaaggcttgatcctgcaggatggatcctacttccga
gacctctggaacatcctggactttgtggtagtggttggtgcattggtagcctttgctctg
gcgaatgcattgggaaccaacaaggggcgagacatcaagactatcaagtctctgagggta
ctccgggttctgcgaccactgaaaaccatcaagcgcttgcccaagctgaaggctgtgttt
gactgtgtggtgacctccctgaagaacgtcttcaacatactcattgtctacaaactcttc
atgttcatctttgctgtcattgctgtccagctgttcaaagggaagttcttttattgcacc
gacagctcgaaggacacagagaaggagtgcataggcaactatgtagatcacgagaaaaac
aagatggaagtaaagggccgggaatggaagcgtcatgagttccactacgacaacatcatc
tgggccctgctgaccctcttcactgtctccacaggggaagggtggcctcaggtcctgcag
cattctgtagatgtgacagaggaagacagaggcccaagccgcagcaaccgcatggagatg
tccatcttttatgtggtctactttgtggtgttccctttcttcttcgtcaatatcttcgta
gctctcatcatcatcaccttccaggagcaaggggataagatgatggaggagtgtagcctg
gaaaagaacgagcgggcatgcattgacttcgccattagtgccaaacccctcacccgctac
atgccacagaacagacacaccttccagtaccgcgtctggcactttgtggtttctccatcc
tttgagtacaccatcatggccatgatcgccttgaacactgtcgtgctgatgatgaagtac
tattctgctccttgcacctatgaacttgccctaaagtacctgaacattgccttcaccatg
gtgttctccctggaatgtgtcctaaaggtcatcgcttttggcttcctgaactatttccga
gatacctggaacatctttgacttcatcacagtgattggcagtatcacagaaattattctg
acagacagcaagctggtgaacaccagtggcttcaatatgagcttcctgaagctcttccga
gccgcgcgcctcataaagcttttgcgtcagggctacaccattcgcatcttactgtggacc
tttgtgcagtcctttaaggctctcccctatgtctgccttctgatcgccatgcttttcttc
atctatgccatcatcgggatgcaggtatttggaaacataaagttagatgaggagagtcac
atcaaccggcacaacaacttccggagtttctttgggtccctcatgctgctcttcaggagt
gccacaggggaggcgtggcaggagataatgctgtcgtgtctcggcgagaagggctgtgag
cccgataccaccgcaccctcagggcagaacgagagcgagcgctgtggcactgacctggcc
tacgtgtactttgtctccttcatcttcttctgctccttcctgatgctcaacctgtttgtg
gctgtcatcatggataactttgagtacctgactcgagattcctctatcctggggcctcac
cacttggatgagtttgtccgtgtctgggcagaatatgacagagcagcatgtggccgcatc
cattacactgagatgtatgaaatgctgactctcatgtcaccaccgctaggcctcggcaag
agatgtccctccaaagtggcctataagaggttggtcctgatgaacatgccagtggctgag
gacatgacagtccactttacctccacacttatggctctgatccggacagctctggacatc
aaaatcgccaaaggtggtgcagacagacagcagctagactcggagctacaaaaagaaact
ctggccatttggcctcacctgtcccagaagatgctggatctgcttgtgcccatgcccaaa
gcctctgacctaacagtgggcaagatctatgcagcaatgatgatcatggactactataaa
cagagcaaggtgaagaagcagagacagcagctggaagaacagaaaaatgcacccatgttt
cagcgcatggagccctcatcactgccgcaggagatcatcgctaatgccaaagcgctgcct
tatctccagcaggaccctgcttcaggcctgagtggtcggagtggatacccttcaatgagt
ccactctctccgcaagaaatattccagttggcttgtatggaccctgctgatgatggacaa
ttccaggaacagcaatctctggagccagaggttagtgaattaaaaagtgtgcagtcctct
aaccatggcatctaccttcctccggacacccagaagcatgcgggatctgggagggcatcc
tctatgccacgactgactatggacccccaggtggtaacagaccctagttctatgcgacgt
tcattttctacaattcgggataagcgttcaaattcctcatggttggaggagttctccatg
gagcgtagcagtgaaaatacctacaagtcgcggcgcagaagctaccactcctccttgagg
ctgtcagcccaccgcctgaattctgactctggtcacaagtctgacacgcaccgttcagga
ggcagggagagaggccgatccaaagagagaaagcatcttctctcccctgatgtctcccgc
tgcaattctgaggagcgagggacccaggctgactgggagtccccagaacgtcgccagtcc
aggtcacccagcgagggaagatcacagacccccaacagacagggcactggttccctgagc
gagagctccatcccctccatctctgacaccagcaccccaagacgaagtcgtcgccagctc
ccacctgtgccaccaaagcctcggcccctcctctcctacagctccctgatgagacacact
gggggcatctctccacctcctgatggaagtgagggtggatccccgctggcctctcaagcc
ctggagagcaacagcgctggcctgaccgagtcttccaattccttgcacccccagcagggc
cggcactcttccccacaacactacatctccgagccctatctggccctccacgaagattcc
cacgcctcagactgtggcgaggaggagacactcacctttgaggcagccgtggctactagc
ttgggccgctccaacaccatcggctctgccccacccctgcggcacagctggcagatgcct
aatgggcactatcggcggcggaggcgtggggggcctgggcctggcatgatgtgtggagct
gtcagtgacctcctgagtgacacggaagaagatgataagtgctag
DBGET
integrated database retrieval system
