Arvicola amphibius (Eurasian water vole): 119827513
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Entry
119827513 CDS
T08327
Symbol
Taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119827513 (Taf1a)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
119827513 (Taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
OGFr_N
COG4_N
Motif
Other DBs
NCBI-GeneID:
119827513
NCBI-ProteinID:
XP_038205190
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All DBs
Position
12:complement(11984083..12012770)
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AA seq
453 aa
AA seq
DB search
MSKFRDELKRLAVAEHDKREASVLSNPGMHFPWLQERIETVVTGGKKKRGFTQTTSACLS
FIQEALLKHQWQQAADYMHSYLQTLEDSDTFKRQVAPEIIWKLGSEILFYHPKSNVETFN
NFADRMKNIGVLNYLKISLQHALYLLHHGMLEDANRNLTDAEAWRYGEKSSSQEVLINLV
QAYKGLLQYYTWSRKKMELSELDEDDYAYTAKTQHMLSQSCKTSASISALLKTPGVWDPF
VKSYVEMLEFYGDQDGAREILTNYAYDEKFPSNPNAHIYLYEFLKREKAPRAKLISVLKI
LHGIVPSHPLMLEFHTMLRKSETEEHRKLGLGVLFEFLDFAGCTKNITAWKYLAKYLKQT
LMESHLAWVEEEWKSRRSWWPAFHFSFFWAKSDWKADADLAYEKAFVAGILLGKGCRYFR
YILKQDHETLKKKIKQMKKSVKKYSIVNPGVPT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttccgtgacgaattgaaaaggcttgctgtggcagagcatgacaagagagaa
gcttctgtgttatctaatcctgggatgcatttcccatggcttcaggagcgcatagaaacc
gtggtgaccggagggaagaagaagaggggttttactcagacaacaagtgcttgtttaagc
ttcatccaagaagccctgctgaagcaccagtggcagcaagctgcagactatatgcacagc
tacttacagactctggaagactcagacaccttcaagagacaagtcgcccccgagatcatt
tggaagcttggaagtgaaattctattttatcatcctaaaagcaatgtggagacttttaat
aactttgctgaccggatgaaaaatattggcgtcttgaactatttaaagatctccttacaa
cacgcgttgtatcttttacatcacggaatgctggaggatgcaaacagaaacctcactgat
gcagaggcatggcggtacggtgaaaagtcgtcctctcaggaagtgctgataaaccttgtt
caggcctacaaagggcttttacagtactacacgtggtccaggaagaagatggagctgtca
gagctggatgaggatgattatgcttacaccgcaaaaactcagcacatgctcagccagagc
tgcaagacgtctgcaagtatttctgcgctgctcaaaactcccggggtttgggaccctttc
gtgaagagttatgtggagatgctagaattctatggtgatcaagatggagcccgagaaata
ctcaccaattatgcgtatgatgaaaagtttccctcaaaccccaatgcccacatctactta
tatgaatttctgaagagagagaaggcaccaagagcgaaactgataagtgttcttaagatt
ttacatgggattgtaccatcccatccactgatgttagaattccatacgatgcttaggaaa
tcagagacagaagaacaccggaagctgggcttgggcgtattatttgaattccttgatttt
gctggatgcactaagaacataactgcctggaaatacttggcaaagtatctgaaacagaca
ttgatggaaagccatctggcgtgggtcgaagaagagtggaaatctaggagaagctggtgg
ccggcctttcacttcagcttcttttgggcaaagagcgactggaaggcagatgctgattta
gcttatgagaaagcttttgtagcgggaatccttttaggaaaaggttgtagatattttcga
tatattttgaaacaagaccatgaaaccttgaagaagaaaattaagcagatgaagaagtct
gtgaaaaaatatagtattgtaaatccaggtgttcccacctag
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