Arvicola amphibius (Eurasian water vole): 119827728
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Entry
119827728 CDS
T08327
Symbol
Ldb3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119827728 (Ldb3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119827728 (Ldb3)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119827728 (Ldb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
DUF3854
Motif
Other DBs
NCBI-GeneID:
119827728
NCBI-ProteinID:
XP_038205493
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All DBs
Position
12:complement(34349422..34406486)
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AA seq
731 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPVAISTAAPPIQSPLPVIPHQKDPALDTNGSLATP
SPSPEARASPGTLDFGDTFSSSFSQTSVCTPHMEAPESVLPQGSPVAKASPEGVQGSVSP
KVLPGPSQPRQYNNPIGLYSAETLREMAQMYQMGLRGKASGAALLGGSLPVKDLAVDSAS
PVYQAVIKNQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIE
HAPVCTSQATTPLLPASAQPPAAASPIAASPTLATTAAAHAAAASAAGPASSPVESPRPQ
ASAYNSATATSPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANY
SSAPYTPSPAPAYTPSPAPTYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYSPAPSAA
YSGGPAESASRPPWVTDDSFSQKFAPGKSTTSVSKQTLPRGAPGYNPTGPQVTPLARGLF
QRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKNSLADVCFVEEQNNV
YCERCYEQFFAPLCAKCNTKIMGEVMRALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPY
CEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKP
LCKKHAHAVNV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagtgtgactctgactgggcctggaccctggggcttccgtcttcagggaggc
aaggacttcaacatgcccctcactatctcccggatcactcccggcagcaaggcagcccag
tcccagctcagccaaggcgaccttgtggtggccattgatggcgtcaacacggacaccatg
acccacctggaggcccagaacaagatcaaatctgccagttacaacctgagcctcaccctg
cagaagtccaagcgtcctgttgccatctccacagcggcacctcctattcagtccccgctg
ccagtgatccctcaccagaaggaccctgctctggacacgaacggcagcctggcgactccc
agccccagccctgaggcaagggccagcccaggcaccctggattttggggacacctttagc
tcctccttctcccagacatctgtctgcaccccacacatggaggccccggaatctgtcctt
cctcagggcagcccagtggccaaggccagcccagagggtgtacagggctcagtcagccct
aaagttctgccaggccccagccaaccgaggcaatataacaaccccattggcctgtactca
gcagagacactgagggagatggctcaaatgtatcagatgggcctccgagggaaggcctca
ggtgctgcactccttggagggagcctccccgtgaaagacttggccgtggatagcgcctct
cctgtgtaccaggctgtgatcaaaaaccaaagcaagccggaggatgaggctgatgagtgg
gcccgccggtcctccaacctgcagtctcgctccttccgcatcctggcccagatgacaggg
acagaatacatgcaagaccctgacgaggaagcactgcgaagatcaagcacccctattgag
catgctccagtgtgcaccagccaggccactaccccgctactgcctgcttctgcccagccg
cccgctgctgcctctcccattgcggcctcgccaaccctggccacaactgctgctgcccac
gctgccgctgcctctgctgcaggtcctgcctcgagccctgtggagagtcccaggccacag
gcctctgcgtacaactctgcaaccgccacttctccagcaccctctgcccacaccagctac
agcgagggtccagctgcccctgcacccaagccccgggttgtaaccaccgccagcattagg
ccttctgtctaccagccagtgcctgcatctacctacagcccgtccccaggagccaattat
agttccgctccctataccccctcacctgctcctgcttataccccctcacctgcacccacc
tataccccctcacctgctcccacctataccccctcacctgctcccacctattccccttcc
cctgcaccagcttataccccttcccctgccccaaactatagccctgccccctcagcagcc
tacagcgggggccctgcagagtctgccagccgcccaccctgggtgactgatgacagcttc
tctcagaagtttgctcctggaaagagcaccacttctgtcagcaagcagaccctgccccgg
ggggctccaggctacaacccaacaggtccacaggtgacccctcttgccaggggcctgttc
cagagagctgaacgcttcccagctagcagccggactcccctctgtgggcactgcaacaat
gtcatcaggggcccttttctggtagccatgggccgctcttggcacccggaagagttcaat
tgtgcctactgcaagaactccctagcagatgtgtgctttgtggaggagcagaacaatgtt
tactgtgaacggtgctacgagcagttttttgccccgctctgtgccaagtgcaacaccaag
atcatgggggaagtgatgcgcgctctgaggcagacatggcacactacctgctttgtctgc
gcagcctgcaagaaaccttttggaaatagcctcttccacatggaggatggagagccatac
tgtgagaaagactacatcaatctgttcagcaccaagtgtcatggatgtgactttcctgtg
gaagctggcgacaagtttatcgaagccctggggcacacctggcatgacacctgcttcatc
tgtgcggtctgccatgtgaatctggaggggcagccattttactccaagaaagacaaacca
ctgtgcaagaagcatgcgcatgcagtcaacgtgtag
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