Arvicola amphibius (Eurasian water vole): 119827740
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Entry
119827740 CDS
T08327
Symbol
Lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04151
PI3K-Akt signaling pathway
aamp04510
Focal adhesion
aamp04512
ECM-receptor interaction
aamp05020
Prion disease
aamp05145
Toxoplasmosis
aamp05146
Amoebiasis
aamp05165
Human papillomavirus infection
aamp05200
Pathways in cancer
aamp05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119827740 (Lamc1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119827740 (Lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119827740 (Lamc1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119827740 (Lamc1)
09162 Cancer: specific types
05222 Small cell lung cancer
119827740 (Lamc1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119827740 (Lamc1)
09174 Infectious disease: parasitic
05146 Amoebiasis
119827740 (Lamc1)
05145 Toxoplasmosis
119827740 (Lamc1)
09164 Neurodegenerative disease
05020 Prion disease
119827740 (Lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
JAG1-like_EGF2
LOH1CR12
CbiZ
Csa3_N
DUF6061
Motif
Other DBs
NCBI-GeneID:
119827740
NCBI-ProteinID:
XP_038205514
LinkDB
All DBs
Position
12:68163847..68287388
Genome browser
AA seq
1607 aa
AA seq
DB search
MTGGGRAEVALRPRGRLWPLLAVLAAAAGCVRAAMDECADEGGRPQRCMPEFVNAAFNVT
VVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQLHLQHGAAFLTDYNNQADTTWWQSQT
MLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSC
ENTYAKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQE
WVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECIKNEFGK
LVCNCKHNTYGVDCEKCLPFFNDQPWRRATAESASECLPCDCNGRSQECYFDPELYRSTG
HGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGV
MGDKCDRCQPGFHSLTEAGCRPCSCNPSGSTDECNVETGRCVCKDNVEGFSCERCKPGFF
NLEPSNPKGCTPCFCFGHSSVCTNAAGYSVYDISSTFQIDEDGWRVEQRDGSEASLEWSS
DRQDIAVISDSYFPRYFIAPAKFLGNQVLSYGQNLSFSFRVDRRDTRLSAEDLVLEGAGL
RVSVPLIAQGNSYPSETAVKYIFRLHEATDYPWRPTLTPFEFQKLLNNLTSIKIRGTYSE
RSAGYLDDVTLASARPGPGVPATWVESCTCPMGYGGQFCEMCLSGYRRETPSLGPYSPCV
LCTCNGHSETCDPETGVCNCRDNTDGPHCEKCSDGYYGDSTLGTSSDCQPCPCPGGSSCA
IVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNC
NRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVT
GQCECLPHVSGRDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGITG
QHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDDGRCECREGFVGNRCDQCEENYFYN
RSWPGCQECPACYRLVKDKVAEHRVKLQELESLIANLGTGDETVTDQAFEDRLKEAEREV
TDLLREAQEVKDVDQNLMDRLQRVNSSLHSQISRLQNIRNTIEETGILAEQARSRVESTE
QLIEIASRELEKAKMAAANVSITQPESTGEPNNMTLLAEEARRLAERHKQEADDIVRVAK
TANETSVEAYNLLLRTLEGENQTAFEIEELNRKYEQAKNISQDLEKQAARVHEEAKRAGD
KAVEIYASVAQLTPVDSEALESEANKIKKEAADLDRLIDQKLKDYEDLREDMRGKENEVK
NLLEKGKAEQQTADQLLARADAAKALAEEAAKKGRNTLQEANDILNNLKDFDRRVGDNKT
AAEEALRRIPAINRTIAEANEKTREAQLALGNAAADATEAKTKAHEAERIASAVQKNATG
TKADAERTFAEVTDLDNEVNVMLRQLEEAENELKRKQDDADQDMMMAGMASQAAQEAELN
ARKAKNSVSSLLGQLTDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVADLE
NEARKQEAAIMDYNRDIDEIIKDIHNLEDIKKTLPSGCFNTPSIEKP
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggcgggcgggccgaagtggccctgcggccccgggggcggctgtggccgctg
ctcgctgtgctggcggctgcggcgggctgtgtccgggcggccatggacgagtgcgcggat
gagggcggccggccgcagcgctgcatgccggagtttgttaatgccgccttcaatgtgacc
gtggtggctaccaacacgtgtgggactccgcccgaggagtactgcgtgcagactggggtg
accggagtcaccaagtcctgtcacctgtgcgacgccggccaactccacctgcaacacggg
gcagccttcctgaccgactacaacaaccaggccgacaccacctggtggcaaagccagacc
atgctggccggggtgcagtaccccaactccatcaacctcacgctgcacctgggaaaggct
tttgacatcacctacgtgcgtctcaagttccacaccagccgcccagagagcttcgccatc
tacaagcgcactcgggaggacgggccctggattccttaccagtactacagcggctcctgc
gagaacacctacgcgaaggccaaccgtggcttcatcaggactgggggggacgagcagcag
gccctgtgcactgacgaattcagtgacatttcccctctcaccgggggcaacgtggccttt
tcaaccctggaaggaaggccgagtgcctacaactttgacaacagccctgtgctgcaggaa
tgggtaactgctactgacatcagagtaacactcaaccgcctgaacacttttggagatgaa
gtgtttaacgaccccaaagttctcaagtcctactattacgcaatctcagacttcgccgtg
ggcggcaggtgtaaatgtaatggacatgccagtgagtgtataaagaatgaatttggcaaa
ctggtgtgcaattgcaaacataacacatatggagtcgactgtgagaagtgcctgcctttc
ttcaatgaccagccgtggaggcgggcaaccgccgagagcgccagcgaatgcctgccctgt
gactgcaatggccgatcccaagaatgctactttgaccctgagctataccgttcaactgga
catggtggccactgtaccaactgccgtgataacaccgatggtgccaagtgtgagaggtgc
cgggagaacttcttccgccttggaaacactgaagcctgctctccatgccactgcagtcct
gttggttctctcagcacacagtgtgacagttacggcagatgcagctgcaagccgggagtg
atgggtgacaagtgtgaccgttgccagcctggattccattccctcactgaggcaggatgc
aggccgtgctcctgtaacccgtccggcagcacggatgaatgtaacgtcgaaacgggaaga
tgcgtttgcaaagacaacgtcgaaggcttcagctgtgagagatgcaagcctggatttttt
aatctggaaccatctaatcctaaagggtgcacaccctgcttctgcttcgggcattcctcg
gtgtgcacaaatgctgctggctacagtgtttacgacatctcctccacctttcagattgat
gaggatgggtggcgtgtggaacagagagatggctcggaggcatctcttgagtggtcctca
gataggcaggacatcgctgtgatctcagacagttactttcctaggtacttcattgcccct
gccaagttcctgggaaatcaggttctgagttatgggcagaacctctccttctccttccga
gtggacagacgggacactcgcctctctgcagaagatctcgtgcttgagggagctggcttg
agagtttctgtgcccttgatcgcccagggcaattcctatcctagcgagactgcagtaaag
tacatcttcaggctccatgaagcaacagattacccttggaggcccactctcacccccttt
gaatttcagaagctcctaaacaacttgacctctatcaagatccggggcacgtacagtgag
aggagtgctggatatttggatgacgtcaccttggcaagtgctcgtcctgggcccggagtc
cctgcaacttgggtggagtcctgcacctgtcccatggggtatggagggcagttctgtgag
atgtgcctctcaggctacagaagagaaactccgagtcttggaccttacagcccatgtgtg
ctctgtacctgcaacggacacagtgagacctgtgaccccgagacaggtgtctgtaactgc
agagacaatacagacggccctcactgtgagaagtgtagtgacggatactatggagattca
accctgggcacctcctctgactgccagccttgtccctgccctggtggctcaagttgtgcc
attgttcccaagacaaaggaagtggtgtgcacgcactgtccaactggcacggccggcaag
agatgtgagctctgtgatgacggctactttggagaccctctgggcagcaatgggcccgtg
agactgtgccgtccgtgtcagtgtaatgacaacatagaccccaatgcagttggcaactgc
aaccgcctgacaggagaatgtctgaagtgcatctacaacactgccggcttctactgcgac
cggtgcaaagaagggtttttcggcaatcccctggctcccaatcccgcagacaaatgcaaa
gcctgtgcctgcaatccctatgggaccgtgcagcaacagagcagctgtaaccccgtgacc
gggcagtgtgagtgtctgcctcatgtgtcaggccgggactgtggcgcttgcgaccctggc
ttctacaacctgcagagtggacaaggctgtgagaggtgtgactgccatgctttgggttcc
accaacggacagtgtgacatccgcactggtcagtgtgagtgccagcctggtatcaccggt
cagcactgtgagcgctgtgagaccaaccacttcggatttggccctgaaggctgcaaacct
tgtgactgtcatcacgaagggtccctttcactccagtgtaaagatgatggccgctgtgaa
tgcagggaaggctttgtgggaaatcgctgtgaccaatgtgaagagaactatttctacaat
cgctcttggcctggctgccaggagtgtccagcttgttaccggctggtgaaggataaggtt
gctgagcatcgagtgaagctccaggagttagagagcctcatagcgaacctcgggaccggg
gacgagacggtgacggaccaagcctttgaggacagactgaaggaggcagagagagaggtc
acagaccttctccgtgaggctcaggaggtcaaagatgtagatcagaatttgatggatcgc
cttcagagggtgaatagcagtctacatagccaaattagccgattgcagaatatccggaat
actatagaagagaccggaatcttggctgaacaagcacggtcccgcgtggagagtacagag
caactgattgagattgcctccagggagcttgagaaagcaaaaatggctgctgccaatgtg
tcaatcactcagccagagtctacaggggaaccaaacaacatgacactgttggcagaagag
gcccgaaggcttgcagagcgccacaaacaggaagctgatgacattgtccgagtggcaaag
acagccaatgagacttctgttgaggcctataatctgctcttgaggaccctggaaggagag
aatcaaactgcatttgagatcgaagagctcaataggaagtatgagcaagcaaagaacatc
tctcaggacctggagaagcaggctgcccgagtccacgaggaagccaagcgggcaggtgac
aaagctgtggagatctatgccagtgtggcccagctgacccctgtggactccgaggcgctg
gagagtgaagcaaataaaatcaagaaagaagctgcggatctggaccgtctaattgaccag
aagctgaaggactatgaggaccttcgggaagatatgagggggaaggaaaatgaagtaaag
aaccttctagagaagggaaaagctgagcagcagacggccgaccaactcctagctcgagct
gacgctgccaaggctcttgctgaagaggctgctaaaaagggacgaaataccttacaagaa
gccaatgacattctcaacaacctcaaagattttgataggcgtgtgggtgataacaagacg
gctgcagaggaggctctcaggaggattcccgccatcaaccgcaccatagctgaagccaat
gagaagacacgggaggcacagctggccctgggcaatgctgcagccgatgccacagaggcc
aagaccaaagcccatgaggcagagaggatcgccagcgccgtgcagaagaatgccactggc
accaaggccgacgctgagagaaccttcgcggaagtgacggatctggataatgaggtgaac
gttatgctgaggcagctggaggaagcagaaaatgagctgaagaggaaacaagacgatgcc
gaccaggacatgatgatggcgggcatggcttcacaggctgctcaggaagctgagctcaat
gccagaaaagccaaaaactctgttagcagcctcctcggccaactgactgacctcttggag
cagctaggacaactggacactgtggacctgaacaagctgaatgagatcgagggcaccctg
aacaaagccaaggacgaaatgaaggtcagcgatctggacaggaaggtggctgacctagag
aatgaagcccggaagcaggaggcagccatcatggactataaccgagacatagatgagatc
ataaaggacattcacaacctggaggacatcaagaagaccctaccgtccggctgctttaac
accccgtccattgagaagccctag
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