Arvicola amphibius (Eurasian water vole): 119827810
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Entry
119827810 CDS
T08327
Symbol
Tnr
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04151
PI3K-Akt signaling pathway
aamp04510
Focal adhesion
aamp04512
ECM-receptor interaction
aamp05165
Human papillomavirus infection
aamp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119827810 (Tnr)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119827810 (Tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119827810 (Tnr)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
119827810 (Tnr)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119827810 (Tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aamp00536
]
119827810 (Tnr)
Glycosaminoglycan binding proteins [BR:
aamp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119827810 (Tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
Ig_DSCAM-DSCAML_C
EGF_2
Pur_ac_phosph_N
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
119827810
NCBI-ProteinID:
XP_038205647
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All DBs
Position
12:complement(61590414..61669558)
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AA seq
1358 aa
AA seq
DB search
MGIDGETVVLKNMLIGVNLILLGSMLKPSECRLEVTTERGQRQTVGEEGGASSYNTSSKE
QPMVFNHVYNINVPLESLCSSGLEASAEQEVSAEDDTLAEYIGQTSDHESQVTFTHKINL
PKKACPCASSTQVLQELLSRIEMLEREVSLLRDQCSTNCCQESAATGQLDYVPHCSGHGN
FSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCRELRCPEDCSGKGQCANGTCLCQEGYAGEDCSQRRCLNA
CSGRGHCQEGLCVCEEGYQGPDCSTVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PMALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSPPITAKVATHVSTPQG
LQFKTITETTVEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSLPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDATSTQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTRTTLTDLVPGT
EYGVGISAVMNSKQSIPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDDEEDMMEVLLDATKRHAVLMGLQPATEY
IVNLAAVHGTVTSEPIVGSITTGIDPPKNITISNVTKDSVTVSWSSPVAPFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITRLYPATEYEISLNSVRGREESERVCTLVHTAMDSPTDLT
ATNITPTEALLQWKAPMGEVENYVIVLTHFAIAGETILVDGISEEFQLVDLLPSTHYTIT
MYATSGPLVSGTIATNFSTLLDPPANLTASEVTRQSAMISWQPPRAEIENYILTYKSSDG
SRKELIVDAEDTWIRLEGLSENTDYTVLLQAAQDATRSSLTSTVFTTGGRMFSHPQDCAQ
HLMNGDTLSGVYTIFLNGELSHKLQVYCDMATDGGGWIVFQRRQNGQTDFFRKWADYCVG
FGNLEDEFWLGLDNIHRITAQGRYELRVDMRDGQEAAFAYYDKFAVEDSRSLYKLRIGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYNHRLMAGRKRRALKF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgacggggaaacggtggtcttgaagaacatgctcattggtgtaaacctgatc
ctcctgggatccatgctcaaaccttctgagtgtcggctggaggtgaccacagaaaggggc
cagagacaaactgtgggggaggaaggaggggcttccagctataacacatccagcaaggaa
cagcctatggtcttcaaccatgtgtataacatcaatgtcccgctggagagcctctgctcc
tcagggctggaggcctcggctgaacaggaagtgagcgctgaagacgatactctggcagaa
tacataggtcaaacctcagatcacgaaagccaggtcacctttacccataagatcaacctc
cccaaaaaagcctgcccgtgcgccagttctacccaggtactgcaggagctcctaagccgg
atcgagatgctggagagggaggtgtcattgctgcgagaccagtgcagcaccaactgctgt
caggaaagtgcggccacaggacaactggactatgtccctcactgcagcggccatggcaac
tttagctttgagtcctgtggctgcatctgcaatgaaggctggtttggcaagaactgctca
gagccctactgcccactgggctgctccagtcggggggtgtgtgtcgatggccagtgcatt
tgcgacagtgaatacagtggcgatgactgctctgagctgcggtgcccaacggactgcagc
tcccgggggctctgcgtggatggagaatgtgtctgtgaagagccctatacaggcgaggac
tgcagggagctgcggtgccccgaggactgttcagggaaggggcagtgtgccaacggtacg
tgcctgtgccaagagggctatgctggggaagactgcagccagcgccggtgtctgaacgcc
tgcagtgggcgaggacactgccaggagggactctgcgtctgtgaggagggctaccagggc
cccgattgctcaacagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgatggccctggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccctcccatcactgccaaggtggccactcatgtctccactcctcaaggg
ctacagttcaagacgatcacagagaccaccgtggaggtgcagtgggagcccttctcattc
cccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgct
cagctccccagcgacgttacctccttcaaccagacagggctgaagcccggagaggagtac
attgtgaatgttgtggctctgaaggaacaagcccggagcctccctacctccgccagcgtc
tctactgtcattgacgggcccacgcagatcctggttcgagatgtctctgacactgtggcc
tttgtggagtggaccccacctcgagccaaagtcgacttcattctcttgaaatatggctta
gtgggtggagaaggtggaaagactaccttccggctgcagcctcccctaagccagtactca
gtgcaagcccttagacctggctcccgctatgaggtctcagtcagtgcagtccgaggaacc
aacgaaagcgatgccacaagtacccaatttacaacagagattgatgctcccaagaacttg
cgagtgggttcccgcacagcaactagccttgaccttgagtgggataacagcgaggcagag
gcacaggagtacaaggttgtgtacagcaccctagcgggtgagcagtaccatgaagtgctg
gtccctaagggcattggcccaactaccaggaccaccctcacggatctggtaccaggtaca
gaatacggagttgggatatctgcggtcatgaactcaaaacaaagcattcctgctaccatg
aacgccaggactgagcttgacagtccccgagaccttatggtaacagcctcatcagagacc
tctatctctctcatctggaccaaggccagcggtcccattgatcactaccgaattactttt
accccatcttctgggatctcctcagaagtcactgtgcctagggacaggacttcatatact
ctgacagatctagagcccggagcagaatacatcatctctatcacggctgagaggggtcgg
cagcagagcctggagtccactgtggatgccttcacaggctttcgccctatctcccatctg
cacttttctcacgtgacctcctccagtgtcaacatcacctggagtgacccatctccccca
gcagacagactcatcctcaactacagccccagggatgatgaggaagacatgatggaggtc
ctcctggatgccaccaagaggcacgctgtcctcatggggctacagccagccactgaatat
atagtgaaccttgcagctgtccatgggaccgtaacctccgagcccatagtgggttccatc
actacaggaattgatccccccaaaaacatcacaattagcaatgtgactaaggactcggtg
acggtttcctggagctctcctgtcgcaccttttgattactaccgtgtatcatatcgaccc
acacaagtgggacggctggacagctccgtggtgcccaacactgtgacagagttcaccatc
accaggctgtatccagctactgaatatgaaataagcctcaacagtgtgcggggcagggag
gagagtgagcgcgtctgcaccctggtgcacacagccatggatagccctacggatctgact
gctaccaacatcacccccacagaagctctgcttcagtggaaagcacccatgggtgaagtg
gagaactatgtcattgtcctcacacactttgcaattgcaggagagaccatcctggttgat
ggaatcagtgaagaattccagcttgttgacctgcttcctagcacccactacaccatcacc
atgtatgccaccagtgggcctctcgtgagtggcaccattgccaccaacttctctaccctc
ctggaccctcctgccaacctgacagccagcgaagtcaccaggcaaagtgcaatgatctcc
tggcagccacctagagcagagattgaaaactatatcctgacatacaagtcctctgatggt
agccgcaaggagctgattgtggatgctgaggacacgtggatccgactggagggcctgtca
gagaacacagactacacagtgctcctgcaggcagctcaggatgccacaaggagcagcctc
acctctactgtcttcaccacaggaggtcgaatgttctcccatcctcaggactgtgcccag
catttgatgaatggagatactctgagtggagtgtacaccatcttcctcaatggggagcta
agccacaagctgcaagtatactgtgacatggccacagatgggggcggctggattgtgttc
cagaggcggcagaacggccaaactgattttttccggaaatgggctgattattgcgttggc
tttgggaatctggaggatgagttttggctagggctagataacatccacaggataacagcc
cagggccgctatgagctgcgagttgatatgagggatgggcaggaggcagccttcgcctac
tatgacaagttcgctgtagaggacagcagaagcctatacaagctccgcataggaggctac
aatggcactgcaggagactccctcagctatcaccagggacgccctttctccacagaggac
agagacaacgatgttgcagtcaccaactgtgccatgtcatacaagggtgcttggtggtat
aagaactgccaccggaccaacctcaatgggaagtacggggagtccaggcacagtcagggg
atcaactggtaccattggaaaggccatgaattctccatcccctttgtagaaatgaagatg
cggccctacaaccaccggctcatggccgggaggaaacggcgagccttgaaattctga
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integrated database retrieval system
