Arvicola amphibius (Eurasian water vole): 119827899
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Entry
119827899 CDS
T08327
Symbol
Ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04330
Notch signaling pathway
aamp05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119827899 (Ncstn)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
119827899 (Ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
119827899
NCBI-ProteinID:
XP_038205771
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Position
12:21835913..21852417
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AA seq
709 aa
AA seq
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MATTRGGSGPDPGSRGLLLLLSFSMTLAGLCRGNSVERKIYIPLNKTAPCVRLLNATHQI
GCQSSISGDTGVIHVVEKEEDLQWVLTDGPNPPYVVLLEGRLFIRDVMEKLKGKTNRIAG
LAVTLAKPNSTSSFSPSVQCPNDGFGVYSNSYGSEFAHCKQTLWNELGNGLAYEDFSFPI
FLLEDENETKVIKQCYQDHNLGQNGSAPNFPLCAMQLFSHMHAVISTATCMRRSLIQSTF
SINPEIVCDPLSDYNVWSMLKPINTSGALEPDDRVVVAATRLDSRSFFWNVAPGAESAVA
SFVTQLAAAEALHKAPDVTALPRNVMFVFFQGETFDYIGSSRMVYDMENGKFPVRLENID
SFVELGQVALRTSLDLWMHTDPMSQKNDSVKNQVEDLLATLEKSGAGVPEVVLRRQNQTQ
ALPPSSLQRFLRARNISGVVLADHSGSFHNRYYQSIYDTAEKINVTYPEWQSPEEDLNFV
TDTAKALASVATVLARALYELAGGTNFNDSIQADPQTVTRLLYGFLVRANNSWFQSILRQ
DLRSYLDDGPLQHYIAVSSPTNTTYVVQYALANLTGKVTDLTREQCQDPSKVPNESKDLY
EYSWVQGPWNSNKTERLPRCVRSTVRLARALSPAFELSQWGSTEYSTWAESRWKDIQARI
FLIASKELEFITLIVGFGILVFSLIVTYCINAKADVLFVAPREPGSVSY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggctacgactaggggcggctctgggcctgacccaggaagtcggggtcttcttctcctt
ctgtctttttccatgacactggcaggattgtgtcggggaaactcagtggagaggaaaatc
tacatccccttaaataaaacagctccttgtgtccgcctgctcaatgctactcatcagatt
ggctgccagtcttcaattagtggggatacaggagttatccatgtagtggagaaagaagag
gacctgcagtgggtgttgacggatggccccaaccccccgtatgtggttcttctggagggc
aggctctttatcagggatgtaatggaaaagctgaaggggaaaaccaacagaattgctggt
cttgcagtgactctagccaagcccaattcgacttcaagcttctctcctagtgtgcagtgc
ccaaatgatgggtttggtgtttactccaactcctatggctcagagtttgctcactgcaaa
cagacactgtggaatgaactgggcaatggcttggcttatgaagacttcagttttcccatc
tttcttcttgaagatgagaacgaaaccaaggtcatcaagcagtgctatcaagatcacaac
ctgggtcagaatggctctgcaccaaatttcccactgtgtgctatgcagctcttctcacac
atgcacgccgtcatcagcaccgctacctgcatgcggcgcagcttaatccagagcaccttc
agcatcaacccagaaatcgtctgtgaccccttatctgactacaacgtatggagcatgctt
aagcctataaatacatctggggcattagaacctgatgacagggttgtggttgctgccacc
cggctggatagccggtcctttttctggaatgtagccccaggggcagaaagtgctgtagcc
tcctttgtcactcagctggctgcagctgaagctttgcacaaggcacctgacgtgactgcc
ctaccccgcaatgtgatgtttgtcttcttccagggggaaacttttgactacattggcagc
tcaaggatggtctatgacatggagaacggcaagtttcccgtgcggctcgagaatattgac
tcatttgtggagctgggacaggtggccttaagaacttccctagatctctggatgcacaca
gatcccatgtctcagaagaacgactctgtgaagaaccaggtggaggacctcctggccact
ctggagaagagtggtgctggtgtcccggaagttgtcctcaggagacagaatcagacccag
gcccttccaccatcatctctacaacgatttcttcgggctcgaaacatctcgggtgtggtt
ctggccgaccactctggttccttccataaccggtattaccagagcatttacgacactgct
gagaagattaacgtgacctatccagagtggcagagcccagaagaggatctgaactttgtg
acagatactgccaaggcactggcgagcgtggccacagtgctggctcgcgcattgtatgag
cttgcaggaggaaccaacttcaatgactccattcaggctgatccccaaacagttacacgt
ctgctctatgggttcctggttagagccaacaactcgtggttccagtctatcctcagacag
gacctaaggtcctatttggatgatgggcctcttcaacactacatcgctgtctccagccct
accaacacgacttacgttgtgcagtatgccttagcaaatctgacaggcaaggtgaccgac
ctcacccgagagcagtgccaggatccaagtaaagtcccaaacgaaagcaaggatctgtat
gaatactcgtgggtacaaggcccttggaattccaacaagactgagcggctcccccggtgt
gtgcgctccacagtacgactggccagggccttgtcccctgcctttgaactaagtcagtgg
ggctccacagaatattctacatgggccgagagccgctggaaagacatccaagctcggata
ttcctgattgccagcaaagaacttgagttcatcaccttgatcgtgggcttcggcatcctc
gtcttctcgctcatcgtcacttactgcatcaatgccaaagccgatgtccttttcgttgct
ccccgagagccagggtccgtgtcttactga
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