Arvicola amphibius (Eurasian water vole): 119828019
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Entry
119828019 CDS
T08327
Symbol
Slamf1
Name
(RefSeq) signaling lymphocytic activation molecule isoform X1
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
aamp04517
IgSF CAM signaling
aamp05162
Measles
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
119828019 (Slamf1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119828019 (Slamf1)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
119828019 (Slamf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119828019 (Slamf1)
04090 CD molecules [BR:
aamp04090
]
119828019 (Slamf1)
Cell adhesion molecules [BR:
aamp04515
]
Immunoglobulin superfamily
SLAM/CD2 family
119828019 (Slamf1)
CD molecules [BR:
aamp04090
]
Proteins
119828019 (Slamf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_3
Ig_2
ig
I-set
DUF5737
Motif
Other DBs
NCBI-GeneID:
119828019
NCBI-ProteinID:
XP_038205961
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All DBs
Position
12:complement(22083402..22116896)
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AA seq
340 aa
AA seq
DB search
MEPNRSLSLGILLLLSLAFELSYGTGGGLMNCPVIIQQLGNDTTWLPLTKESVNKSIRIL
VTMATAMSLESKITKKIVSFNLAKGGYLEHLENGYQFQPENLSLGILGNRRESEGWYIVS
LEENVQVQQFCIQLKLYEQVSTPEIKVLNKTQENGNGTCSLTVACTVKKGDHVTYSWSDE
AGNHLLSLANHSHLLNISVSNQQHDSIYNCTASNPVSSRSQSFDLSQECRRESSDTSSWI
THTAGPLGFILPLIVLVPVAVILLKKQGERSHCQRPVEEKGLTIYAQVQKSGPPEKKFDD
ALTDQSPCTTIYVAATEPVPEPVQESNPTTVYASVTLPES
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaacaggtccctctccttgggcatacttctgcttctttctctggcctttgaa
ttgagctacggaacaggtggaggtctgatgaactgcccagtgattatccagcagctggga
aatgacaccacgtggctgcccctgacgaaagagagcgttaacaaaagcatccgcatcctc
gtcacgatggcaacggcaatgtctctagaaagcaaaatcactaagaaaatagtgtctttt
aatcttgctaaagggggctatctagagcacctggaaaatggctaccagtttcaaccggaa
aacctgagcctggggatcctgggaaacaggagggagagtgaaggatggtacatcgtgagt
ttggaggaaaatgtgcaagttcagcaattctgtattcagctgaagctctatgagcaggtc
tccactccagagattaaagtgctaaacaagacccaggaaaacgggaatgggacttgcagc
ttgacggtagcctgcacggtgaagaaaggcgatcatgtgacttatagctggagtgatgag
gcgggcaaccatctgctgagcctagccaatcactcccacctcctgaacatcagtgttagc
aaccagcaacatgacagcatctacaactgcacggcaagcaaccctgtcagcagtcgctct
cagagcttcgacctatcacaggagtgcaggcgagaatcctcagacacaagctcatggata
acacacactgctggaccgttagggttcattctacccctcattgttctggtccccgttgca
gtcattctgctgaaaaaacaaggtgaaagaagccactgccagcggccagtggaagaaaaa
ggccttactatttatgcccaagtgcagaaatcagggcctccagagaagaaatttgatgat
gccctgacagatcagagtccctgcacaaccatttatgtggctgccacagagcctgtccca
gagcctgtccaggaatcaaaccccaccacagtttacgccagtgtgacactaccagagagc
tga
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