Asterias amurensis (Northern Pacific seastar): 139933963
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Entry
139933963 CDS
T10870
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03018
RNA degradation
aamu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139933963
09123 Folding, sorting and degradation
03018 RNA degradation
139933963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139933963
03041 Spliceosome [BR:
aamu03041
]
139933963
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139933963
mRNA degradation factors
5'-3' decay
Lsm complex
139933963
Spliceosome [BR:
aamu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139933963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
139933963
NCBI-ProteinID:
XP_071784311
LinkDB
All DBs
Position
2:complement(8479375..8484053)
Genome browser
AA seq
96 aa
AA seq
DB search
MASGLESYINHTVSVITNDGRQIVGTLKGFDQTINLILDESHERVYSNTAGVEQVVLGLY
IIRGDNIAIIGEIDDDTDSALDLTNVKAEPLNPVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggactggagagttatataaaccacacagtttctgtcattaccaacgatggt
cgacagatagtgggaacgttaaaaggttttgatcagacaataaatctgatcctggatgag
agtcacgagagagtttacagcaacacggcaggcgtggagcaggtggtacttggtctttac
atcatcagaggagacaacattgcgatcattggtgaaatagatgacgatacagacagcgcc
ttggacttgaccaatgtgaaagcagagcctctcaaccctgttgtacactga
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