Asterias amurensis (Northern Pacific seastar): 139934566
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Entry
139934566 CDS
T10870
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139934566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamu03021
]
139934566
03041 Spliceosome [BR:
aamu03041
]
139934566
03036 Chromosome and associated proteins [BR:
aamu03036
]
139934566
Transcription machinery [BR:
aamu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
139934566
Spliceosome [BR:
aamu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
139934566
Complex B
139934566
Complex C
U2 SnRNP specific factors
139934566
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
139934566
TFTC complex
139934566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_EML
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
139934566
NCBI-ProteinID:
XP_071784938
LinkDB
All DBs
Position
3:complement(21441097..21474556)
Genome browser
AA seq
1216 aa
AA seq
DB search
MFLYSLTLQRATGVVQAIHGNFAGTKQQEIVVARGKALELLKLDPNTGKLHAVLTYEIFG
IIRSLMAFKLTGGSKDYIVVGTDSGRICILEYNPAKNTFDRVHQETFGKSGCRRIVPGQL
MAVDPKGRAVMIAAIEKQKLVYILNRDSQARLTISSPLEAHKSSTFCYHIVGVDVGFENP
MFACLEIDYEEGDSDPTGEAAAATQQMLTYYELDLGLNHVVRKYSEALEEHGNFLIAVPG
GSDGPSGVLICSENYITYKNLGDQPDIRMPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEVRMKYFDTVPIATSMNVLKTGFLFLAAEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRSLKNLVEIDQMESLSPIMNCQIADLANEDT
PQLYVASGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKKLSDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSSSLIGDDSLLQIYPEGIRHIRADKRVNEWKTPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSADVKCMSLATVPSGEQ
RARFLAVGLADDTVRIISLDQSDCLQPLSMQALPAPSESLCIVEMGGTEATETGERGMAG
GLFLNIGLHNGVLLRMVLDSVTGDLSDTRTRYLGSRPVKLFRIKMQGSESVLAMSSRSWL
SYWYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSTPL
TYTPRRFAIHPESNNIVVIESDHNAYTETTKAMRKQQMAEEMVEAAGDEERELAAEMAEA
FLQEDLPESLFGAPKAGPGMWASLVRVLNPVNGTTLDSVALEQNEAAFSLCLCKFASRGD
DTFVLVGTAKDVTLSPRTCSGGFIHAYQLTEDGKKLELLHKTPVDDVPSAICTFQGRVLI
GVGRLLRIYDLGKKKMLRKCENKHIPNFIVNIQTTGQRIIVSDVQESLHFVRYKRHENQM
VIFADDTHPRWVTAMACMDYDTVAVADKFGNLSIIRLIQGTNDDVDEDPTGVKALWDRGL
LSGASQKSEIIINFHIGDTILSLQKATLIPGGSESLVYTTLSGAVGILVPFTSHEDHDFF
QHLEMHMRSEYPPLCGRDHISFRSYFFPIKNVIDGDLCEQFNSMDTSKQRSVADELDRNP
SEVSKKLEDIRTRFAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtattcactgaccctccagagggccacgggagtcgtgcaagctatccatggc
aacttcgccgggacgaagcagcaggagatcgttgtggcccgagggaaggcccttgagctt
cttaagctggatcccaacaccggcaagctccatgccgtgcttacgtacgagatctttggg
atcatccgttcgttgatggccttcaagcttactggagggagcaaagattatatcgtggtt
ggtaccgattcggggcgtatttgcatcctggagtacaacccggccaagaacacttttgac
agggttcaccaagagacgtttgggaagagcggttgccgccgcatcgtacccggtcagctc
atggccgttgaccccaagggtcgcgctgtcatgatcgcggccattgagaagcagaagctg
gtctacatcctcaaccgtgactctcaggccaggctgaccatctcgtccccgctggaggca
cacaagtccagcaccttctgttatcacattgtgggcgtggacgttggctttgagaatccc
atgtttgcctgtctggagatcgattatgaggagggcgattcggatccaaccggtgaagca
gcggcagccacccagcagatgctgacatactacgagctagacctggggcttaaccacgtt
gtcaggaagtacagtgaagcactcgaggaacatggcaatttcctcattgctgttcctgga
ggcagtgatggtcctagtggtgtgctgatatgctctgagaattatatcacctacaagaat
ctgggtgaccaaccggacatcagaatgcctatccccagacgaaggaatgatcttgacgat
ccagagagagggatgatcttcgtttgcagtgcaactcataaaacaaagtcgatgttcttc
ttcctggctcagacggagcagggagacatcttcaagataacccttgagacagacgaggac
atggtcaccgaagtccgtatgaagtactttgacacggtccccatcgccaccagcatgaac
gtccttaaaactggcttcctgttcttggctgctgaattcgggaaccactacctctaccag
attgctcacctcggcgatgatgacgatgaaccggagttcagtagcgccatgcccctggag
gaaggagacactttcttctttgctcctcgctccctcaagaatctggtggagattgatcag
atggaaagcttatctccaatcatgaactgccagattgctgatttagcgaatgaagataca
ccgcagttgtacgttgcatcaggaagaggaccccgatcgtcccttcgagttcttcgccat
ggtctagaggtgtcagaaatggctgtgtctgagctgccaggtaatcccaacgctgtctgg
actgtcaagaaactcagcgacgatgagtttgatgcgtacatcatcgtttccttcgtcaac
gctacgctggtcttgtccatcggagagacggttgaggaggtgactgactccgggttcttg
ggtaccacgcccactctgtcctcatcgctgattggggacgattcactcctacagatttat
ccagagggtattcgtcacatcagagctgataaacgtgtcaacgaatggaaaacacccggc
aagaaaagcatcgtcaagtgtgctgtcaatcaacgtcaggttgtgattgctctgacagga
ggagagctggtgtactttgagatggacccaacaggacagttgaatgagtacaccgagcgg
aaggagatgtcagccgatgtcaaatgcatgagtttagccactgtgccatcaggggaacag
agagcacgattcttggctgttggtctcgctgacgacacggtcagaatcatatcacttgac
caatcggattgcttacagccattgagtatgcaagcattaccagctccctcggaatccctc
tgcatcgttgagatgggaggcacggaggcaacagagacgggagaaaggggaatggctggt
gggctcttcttgaacattggacttcacaatggtgttttgttgaggatggtgctcgactct
gtaacgggtgacctatccgacacaagaacaaggtatctaggttccagacccgtcaagctg
tttaggatcaagatgcagggctcggaatcagttcttgccatgtctagccgatcgtggctt
agttattggtaccagtcgcgtttccacctgaccccgctgtcctacgagacattggagtat
gcgtctgggtttgcctcggagcagtgccccgaaggaatcgtggccatctcaacaaacaca
ctcagaatcttggctctggaaaagcttggggcagtcttcaaccaggtatcgacaccactg
acctacacgccacgcagatttgccatccatccagagagtaataatatagtggtgattgag
agtgaccacaatgcgtacacagaaacaaccaaagcaatgcgcaaacaacagatggcagag
gaaatggtagaagcagctggggatgaggagagagaactagctgccgagatggctgaagcc
ttccttcaggaagacctaccggagagtctgtttggcgcccccaaggcaggcccgggcatg
tgggcgtcgctggtcagagtactgaaccctgtgaatggaaccacgctggattctgtggct
ttggaacagaacgaggctgcattcagtctttgcctgtgtaagtttgcaagtagaggagac
gacacctttgtcttagtgggtacggccaaagacgtcaccctgagcccaaggacctgctct
gggggtttcatccatgcctaccagctcacagaggacggcaagaaactggaattacttcac
aaaactccagtggatgatgtcccttcagcaatctgcacttttcagggccgggtcttaatt
ggtgttggtagattactcagaatctacgacttgggaaagaaaaagatgctcagaaaatgt
gaaaacaagcacatcccaaacttcatagtgaatatccagacgacgggtcagcggatcata
gtaagcgatgtccaggagagtcttcactttgtacggtataaacgtcatgaaaatcagatg
gtcatcttcgctgatgatacgcatcctcgctgggtcacagccatggcttgcatggactac
gacacggtcgctgttgctgataagtttggaaatctttcaattattcggctgatacaaggc
accaacgatgacgttgatgaagatccgacgggggtcaaagccctctgggatcgaggtctc
ctcagcggggcttcacagaagtctgaaatcatcatcaatttccacatcggagacaccatc
ttatcgctgcagaaggcaacgttgatccccggtggctcggagtcactggtgtacaccacg
ctgtctggggcagttggaatcctagtgccattcacatcccatgaggaccatgacttcttt
caacatcttgagatgcacatgcgctcagagtacccgcctctatgcggacgggaccacatc
tcgtttagatcctacttcttcccaatcaagaatgttattgacggtgatctgtgtgagcag
ttcaattcaatggataccagtaagcagcgaagcgtggccgatgagctagacagaaacccg
agcgaggtatcaaagaaacttgaagatatcaggaccagatttgccttctag
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integrated database retrieval system
