Asterias amurensis (Northern Pacific seastar): 139934688
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Entry
139934688 CDS
T10870
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139934688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamu03000
]
139934688
Transcription factors [BR:
aamu03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
139934688
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
139934688
NCBI-ProteinID:
XP_071785146
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Position
3:complement(19694469..19724712)
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AA seq
1110 aa
AA seq
DB search
MAATTTEELDIKQRFEELCLGLNLDDSSGREAWDTFERISVNYTLEGDDLHWLVCALYVA
CRRSTIPTVGNGTVEGNCVSLTRLLRSARLSVIQFFSKMKKWEDMANLPQQFRDKVERLE
RNFNVSTVIFKKYQPIYLDIFKSVTNEQPRVPRGRKQRRQPCSNSELFSFCWTLFTLIKG
NFPAISDDLVNSYHLLLCCLDLVFANIVLANRRDLLNPDFSGLPENYLSRTYAVPQDCPC
IIEKLCELHDGLVLEAKGIKEHWWKPHIRKLIEEKVLKGNLEKLSGLVDTSSFEPNSKSI
NKQYEEYVLTKGDFDERIFLSDDANEEIGTPAKSPAMKEATSLRESMQAKRNVPQYIEKV
KTLCPSTPLTNRRYLKDKDPTVTPVSTATQTVSRLQALLAGRKVGPSDELQAMLTECCSQ
DISESIINRVKEMGELFCQRYTQDDGNGPPIDFAKRRLTLAKSLYYKALESILASEKRRV
EHKGKTDLSTLLDHDIFHRSLLACCLEVIIFAYNSQKSFPWILEIFELPAFHFYKVIELL
LRAEEGLSRDIVKHLNHVEEEILQDRAWRGDSPVWGALRESKDGAPSCEDVSITTHQDNG
TKANGSGPQPYRSPVVHQRVRMLMESDPAKKDALLQSPTSARDRFSSPSPGSAKRRLFVV
TSPVDESSKSTNGTSDESSLGETTLESGVTVSVKPKAITLTQPKTRTVTQPQTVTVTIQG
MRKTGIKDKDGNIKFVSSPLKVTTSPRVMTRGQTQQLSSATMSKSPLKDEMEISVTGTGQ
GEVDQAAVAMSKPRRTGSVGLFFRKVFHLVNVRLLDLAHKLNLSEDLRRKTWTCIEYSLT
KHVDLMKDRHLDQVIMSAIYLMCKVTKQDQKFQDIMKAYRRQPQAQSHVYRSVLLQDRRQ
HSANGTNGANGNGSRQSSPDADKQKVDSSPNPHGLRVRSASTLPIHSGSAPPTPTRMAGT
SSSFEDEERGDLITFYNAIFVKRIQHFALRFSPPSEGSQENLEAPSLSPMPVIRPHPASP
RKVSSRHEVYVTPHANSIPVPTSPNQGMLYFINKSPAKNLRDINNMIKLNGERQTPKRVL
PLDANDSSPKRICMEPNRLAQRIISLKSDR
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggccgccactactacagaagaattggacataaaacaacgatttgaggagctgtgtctg
ggtctaaatcttgacgattcgtccggacgcgaggcatgggatacattcgaacgaataagc
gtaaattatacgctggagggagatgatcttcactggcttgtctgcgcgttgtacgtagca
tgtcgcagatcgacaatacccaccgttggcaatggaactgtggaagggaactgcgtttct
ctgactcgtctcttgcgatctgcaaggctaagtgtcattcagttcttcagcaagatgaag
aagtgggaggacatggcaaatctaccccagcagttccgtgacaaagttgagcgcctcgag
cgcaacttcaacgtctcgacagtgatcttcaagaaataccagcccatctacctggacatc
ttcaagagcgtaaccaatgaacagccgcgtgtaccaagggggcgcaaacagaggaggcaa
ccatgctccaactctgaactcttctcattctgctggacgctgttcactctcatcaaaggt
aatttcccagccatcagcgatgatcttgtgaactcatatcacttactgctgtgctgtctg
gacctggtatttgccaacattgtcctggccaatcgtagagacctcctcaatccagacttc
tcaggtcttccagagaactacttaagtcgaacctacgcagtgccacaagattgcccgtgc
atcatagagaagttatgtgaactacacgatggtttagtactggaggcaaagggcatcaag
gaacactggtggaaacctcacatcagaaaactcattgaagaaaaggtgctgaaagggaac
ttggagaaattgtcaggactcgtggatactagttcattcgaaccaaacagtaaaagcatc
aacaaacagtacgaggagtatgttctgaccaagggagatttcgacgagcgaatcttcctg
agcgacgatgcaaacgaggagataggcactccagcgaagtcgcctgccatgaaagaagct
actagtctgagagagagtatgcaagctaagcgtaacgtgccacagtatattgagaaggtg
aagaccctttgtccgtccacacccctcaccaaccgccgctatctgaaagataaagaccca
acagtaacaccggtctccaccgccactcagacagtcagtcgtctgcaggcgctgctggca
ggacgcaaggtgggtcccagcgatgagctgcaggccatgctgactgaatgctgcagccag
gacatctcagagtccatcatcaaccgggtcaaggagatgggggaattgttctgtcagaga
tatacccaggatgacggtaatggacctccgattgattttgctaagaggaggttgacgtta
gcaaagagtctttactataaagccctggagagtatcctagctagtgagaagagacgagtg
gaacataaaggcaagacggacttatcgacgttactggatcatgacatcttccatcggtct
ctcctagcttgctgtttagaagtcattatatttgcatataactcacaaaagtcatttccg
tggattctggagatctttgagttgccggcattccacttttacaaagtgattgagttattg
ctgagggctgaagaaggtctttcgagggacattgtcaaacacctcaaccatgtggaagag
gagatactccaggaccgagcgtggcgaggtgactcaccggtctggggggcattgagggag
tctaaggacggtgcaccgtcctgcgaagatgtctctatcacaacccatcaggataacggt
actaaagctaacggtagtggaccacagccctaccggtctcctgtagttcatcaacgtgta
cggatgctcatggagtctgacccggcaaaaaaagacgccctcctccagtcaccaacctcc
gcccgcgatcggttcagctcgccgtcaccgggtagcgcaaagcgtagactgtttgtcgtc
acgagtcctgtagacgagtcctccaagtcaaccaatggcacctcggacgagagttctctc
ggtgagacgacgctggagagcggcgtgaccgtctctgtgaagcccaaggccatcaccctg
acacaacccaagacgagaacggtgacacaaccccagacggtcacggtgacgatacaaggt
atgagaaagacaggcattaaagataaagatggcaacatcaagttcgtctccagccctctg
aaggtcacaacctctccaagggtcatgacccgaggtcaaacacagcaactgtccagcgca
acgatgagtaagtcgccgctcaaggatgagatggagatcagtgtgacgggtactgggcaa
ggggaggttgatcaagctgccgtggcgatgagcaaaccgaggagaaccggctcggtggga
ctgtttttcagaaaggtgttccacctggtcaatgtgcgtctgctggacctggcacacaag
ctgaacctctcagaggacctacgccgcaagacgtggacctgcatcgagtactcactgacc
aaacatgttgacctgatgaaggaccgacatctagaccaagtcatcatgagtgcaatatat
ctcatgtgcaaggtcaccaagcaggaccagaagttccaagacataatgaaagcgtaccgt
cgtcagccccaggcccagagccacgtctatcgtagcgtactcctccaagacagaaggcaa
cactcggccaatgggaccaacggggcaaatggcaatgggtcacgacagagctcaccagat
gccgacaaacagaaagttgattcaagcccgaacccacacgggctgagagttcgctcagca
agcacactccccattcattccggcagtgcccctcccacccctacaaggatggcaggaacg
agctcatcgtttgaagatgaagaaagaggggacctcattaccttctacaacgcgatattt
gtaaagagaatccagcactttgcgctacgtttctcgccaccgagtgagggcagccaggag
aacctcgaagcgccctcgttgtcaccgatgccagtcatcaggccgcatccagcgtcgcct
cgtaaggtgtccagtcgacacgaggtgtacgtcacccctcacgctaactccattccagtt
ccgaccagtcccaaccagggcatgctctactttattaataagagccctgcaaagaatctt
cgagacatcaacaacatgatcaaacttaacggtgagcgtcagacgcccaagcgggtcctg
cccctagacgctaacgacagctcaccaaaacgaatttgtatggagcccaaccgcctcgca
cagcgcatcatcagcctcaaatcagaccgatga
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