Asterias amurensis (Northern Pacific seastar): 139934865
Help
Entry
139934865 CDS
T10870
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139934865
03009 Ribosome biogenesis [BR:
aamu03009
]
139934865
Enzymes [BR:
aamu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139934865
Spliceosome [BR:
aamu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139934865
Ribosome biogenesis [BR:
aamu03009
]
Eukaryotic type
Pre-60S particles
Helicases
139934865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
139934865
NCBI-ProteinID:
XP_071785381
LinkDB
All DBs
Position
3:2027089..2038952
Genome browser
AA seq
777 aa
AA seq
DB search
MALPSDFIGTIADDDEISVASEDSSSDEEAIKPKKLSKVKRQRKGQEDFSQDFFFSERAL
IEESIWSPNIMKTLKPRGHTLIGKTTSLEQKIAKIRDDRRKEKESEAVLAEATDEKEGAE
NTTPVVDNLDNAVDDDDNDDIENGLEDLQWDSIRVKATSEKRLKRKQKQAGDDSDSDDSE
TQKAKFFADVPELTGYSSFQEMNLSRPLLKAISAMNFVMPTPIQGKTIPMALLGKDICAC
SATGTGKTAAFMLPVLERLLYKPKQLTVTRVLVLVPTRELGVQVHTVTRELAQFSNVDCC
LAVGGLDVKLQESALRKGPDIVIATPGRLIDHLHNAPTFDLKDVEILILDEADRMLDEYF
AEQMKEIIRLCSRSRQTMLFSATMTDEVKDLAAVSLNNPVKLFVNENTDVAFNLRQEFIR
IRPNRDSDREAIAAALCCRTFHDHCIMFVQTKIQAHRLHIILGLFGLNVGELHGNLSQAQ
RLEALRRFKEENVDVLVATDLAARGLDIEGVKTIINFTLPNTLKHYVHRVGRTARAGKSG
RAVSLVGERERKLLKDIVKKANNPVKSRIVPQDVIQKYRDKIISMEDDIEEVMRLEEEEK
EMRITELQMHKANAMLEHQREIFSRPKRTWFQTHKERTIEREHLTLNPEKIKKSKKKAKK
QENDEDPVDRRMQREVEKSQLFAAREAKRSRKTSLMKGINTREKITGDSRASSNKGKKQG
GQKSSFERELTSTNKRSVKQFRSKTHEARKEQQQAQKMSSKTGKQNKPKNKFSKRRK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcccagtgacttcatcggaacgatcgcagatgacgacgaaatatccgttgcc
tcagaagactcaagtagcgatgaggaggccatcaaacccaagaagttatcgaaagtgaag
cgtcagaggaaaggccaagaggatttctcacaggatttcttcttctccgagcgagcatta
attgaagaaagtatatggagtcccaatattatgaagacgttgaagccacgaggccacacc
ttgatcggtaaaactacgtccctggagcaaaagatcgctaagattagggatgaccggaga
aaagagaaagaatctgaggcagttttggcggaggcaacagatgagaaggagggagcagaa
aacacaacaccggtagtcgataacctggacaacgctgtcgatgatgatgacaatgacgat
attgagaatgggttagaggatttacaatgggattcgatcagagtcaaagcaaccagtgag
aaaagactgaaaaggaaacagaaacaagcgggggatgattctgattctgatgattctgag
acgcagaaggccaagttctttgctgatgttcctgagctaactggctacagcagtttccaa
gagatgaatctgtccaggccactactcaaggcaattagtgcaatgaactttgtgatgccg
accccgattcaaggcaaaactatccccatggctctacttggaaaagacatctgtgcttgc
tctgctactggaactggtaaaacggcagcctttatgttacctgttctggagcggcttctg
tacaaacctaaacaactcacagttacacgcgttttggttctggtgcccactagggagctg
ggtgtacaagtacatactgtgacaagagaactggcgcagtttagcaatgtagattgctgt
ctcgctgtcggtggtttggatgtgaaactccaggaatctgctctgaggaaaggccctgat
atcgtcatagcaacaccaggtcgtctaattgatcatttacataatgctcctacctttgac
ctgaaggatgtagaaatcctcatccttgatgaagctgacaggatgttggatgagtatttt
gctgagcagatgaaggagattatcaggttgtgttcacgcagtcgccaaaccatgttattc
tcagctaccatgacagatgaggttaaagatcttgcagctgtgtccctgaataacccagtg
aagctcttcgttaacgagaataccgatgtagcattcaacctccgccaggagttcatccgt
atcagaccgaatagagatagtgatagagaagctattgctgccgcattgtgttgtcggaca
ttccatgatcactgcatcatgtttgtacagactaagattcaagcccatcgtcttcatatc
atcctgggtctatttggactcaatgtaggggagcttcatggcaatctctctcaggcacag
cgtttggaagctcttcgacgattcaaggaagagaacgttgatgttctggtcgctacggat
cttgctgccagaggtcttgatattgaaggagttaaaacgattattaacttcactctgcct
aatactctgaaacactacgtgcacagagtaggacgaactgctagagcaggcaaaagcgga
cgagctgtgagtcttgtaggagagcgtgagcgaaaactcttgaaggacattgtgaagaag
gctaacaacccggtgaaaagtcgtatagttccccaagatgttatacagaagtaccgagac
aagatcatcagcatggaggacgacatcgaggaagtcatgcgtcttgaagaggaggagaaa
gagatgagaataacggagcttcagatgcacaaagcaaacgccatgttggaacatcagagg
gagatcttcagccgaccgaaacgaacatggttccagacgcacaaggaacgcacgattgaa
cgggagcacttgacacttaatccagagaaaattaagaaatccaagaaaaaggcaaagaaa
caggagaacgatgaagatccagttgatcgtcgaatgcagcgtgaggttgagaaatctcag
ttgtttgcagcgagggaagccaagaggtctaggaagactagcctgatgaaagggatcaac
acacgagagaaaatcacaggagactcaagagcctccagtaataaagggaagaagcagggt
ggacagaagtcatcatttgagcgagagttgacgagcacaaacaaaagatccgtcaaacag
ttccgcagcaaaactcatgaagcgaggaaagagcagcaacaagcccagaagatgtcatct
aaaactggaaaacaaaacaagcccaagaataaattcagcaagagaaggaaataa
DBGET
integrated database retrieval system
