Asterias amurensis (Northern Pacific seastar): 139935034
Help
Entry
139935034 CDS
T10870
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139935034
03016 Transfer RNA biogenesis [BR:
aamu03016
]
139935034
Enzymes [BR:
aamu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139935034
Spliceosome [BR:
aamu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139935034
Transfer RNA biogenesis [BR:
aamu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
139935034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
139935034
NCBI-ProteinID:
XP_071785586
LinkDB
All DBs
Position
3:complement(5417517..5443674)
Genome browser
AA seq
738 aa
AA seq
DB search
MTAFAEFGVVPEIVQAVEEMDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPV
IQIVQESLRSKSTGKMQGTIKAKADTPNWLMNSFDRGDSMAIDETGLLCQSREHNSWHGT
RSNKGVINGGRYYYEATVTDEGLCRVGWSTAEASMNLGTDMLGFGFGGTGKKSFGRQFDT
YGEPFGIDDVIGCYLDLNNGTIEYAKNGVYLGHAFDIPKHLLQTPLYAAVVLKNAEMKFN
FGATQFKYKPEGGYKPLCSASPECTAKSSNTGAKQAVAGKPQPNAPKAIILEPSRELAEQ
TLNQIKLFKKHIQTDCPRELLIIGGLPAKQQIEALQNGVDIVVATPGRIEDLISTGKLSL
NQVQFFILDEADGLLSAGYGQQITRMYDQIPKVTMDGKRLQMVVCSATLHSFEVKKLAEK
LMHFPTWVDLKGQDSVPETVHHVVVKVDPINDASWQRKGPKVQTDGVHKRDNIQYGSQNS
ETLSEGVKILKIDYLLKAIAEHKMDRGILFCRTKVDCDNAERYLASMGGGPNSSADHQFS
CVCLHGDRKPPERRENLQRFKDCQVRFLICTDVAARGIDVKGIPYVVNVTLPDEKENYVH
RIGRVGRADRMGLAISFVSTVPEKVWYHSCSSRGRGCTKTALKQQGGCCIWYNEMQYLGD
IEEHLGVVIDQTEPDMKVAANEFDGKVVYGQKKINTGSGYKGHVAILAPSVAELAELEQK
AQTSFLMFTGVQNTLFAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctttgcagagtttggtgtggttccagagatagtgcaggctgtggaagaaatg
gactggctgctgccaacggatgtccaagcagaagccattccattgatccttgggggtggt
gacgtcttgatggcagctgagacgggaagtggaaagactggggcgttctgtctgccagtc
attcagatcgttcaggaatcactaagatccaaatccactgggaagatgcagggaactatc
aaagcaaaagcagatacccccaattggctgatgaactcgtttgacagaggcgattcaatg
gctattgatgaaactgggttactatgccagagcagggagcacaactcatggcacggcaca
cgctccaacaagggagttatcaatggaggcaggtattactacgaggcaaccgttaccgat
gaaggactttgtcgtgttggatggtctactgctgaagcttccatgaatctaggcacagac
atgcttgggtttggcttcggaggaacagggaaaaagtcctttggtcggcagtttgacact
tacggtgagccgtttggaattgatgatgtcattggatgctatttggatctcaacaatggg
accattgagtacgcaaaaaatggtgtttacttgggccatgcgtttgacattcccaaacat
cttcttcagacaccgttgtatgctgctgtcgttcttaagaatgcagaaatgaagttcaac
tttggagccacacaattcaagtacaaacctgagggaggttataaaccactgtgcagtgca
tccccagaatgtacggccaaatcatcaaatacaggtgccaagcaagcggtagctggtaaa
cctcaacccaatgcacccaaggccatcatcctagaaccatcaagagagttagctgagcag
acactgaatcagattaagttgttcaagaagcatattcaaactgattgtccaagagagctg
ttgataattggaggtctaccagccaagcaacaaattgaggcacttcagaatggagtggat
atagtagtggctacccctgggagaattgaagacctcataagtactgggaaactctcactt
aatcaggtccagtttttcattctagatgaagcggatgggctactgtcggctggttatggt
caacagataacccgtatgtacgaccagatacccaaggtcaccatggatggcaagaggcta
cagatggttgtttgctcagccacgctacattcttttgaagtcaagaaacttgccgagaaa
ctgatgcatttcccaacatgggtcgacttgaaggggcaagatagtgtgccggagactgtt
catcatgtcgttgtcaaagtagaccctattaatgatgcatcatggcaacgcaaaggacca
aaagtgcagactgatggagtgcacaaaagagacaacatacagtatggcagtcagaacagt
gagacgctttctgaaggggtcaagatcttgaagattgactacctccttaaggccattgct
gagcacaagatggatcgaggcatcttattctgtcgcaccaaggtagattgtgacaatgca
gagaggtacttagcatcgatgggaggcggtccaaacagttctgctgaccatcagttctcg
tgtgtctgtctccatggtgacaggaagccgccagaacgtcgggagaaccttcaaagattc
aaggattgtcaggtacgcttcttgatttgcactgatgtagcggctagaggaattgacgtc
aaaggtatcccatatgttgtgaatgtcacgctccctgacgaaaaagagaactacgtccat
cggattggtcgtgtgggacgagctgacagaatgggccttgccatttcgtttgtgtccaca
gtaccggaaaaggtgtggtatcattcgtgttccagtcgtggccgaggctgtacaaaaaca
gccttaaagcagcaaggaggatgctgtatatggtacaatgaaatgcagtacctgggcgac
atagaggagcatcttggggttgtgatcgatcagacagaaccagacatgaaagtggccgcc
aatgaatttgacggcaaagtagtgtacggacagaagaaaatcaatacagggagtggttac
aaaggtcatgttgccatcttagccccgtctgtcgccgagctggctgaactggagcagaaa
gctcagacgtcctttcttatgttcaccggtgtccagaacacactatttgcagcatga
DBGET
integrated database retrieval system
