KEGG   Asterias amurensis (Northern Pacific seastar): 139935679
Entry
139935679         CDS       T10870                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
aamu  Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03030  DNA replication
aamu03410  Base excision repair
aamu03420  Nucleotide excision repair
aamu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aamu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139935679
   03410 Base excision repair
    139935679
   03420 Nucleotide excision repair
    139935679
   03430 Mismatch repair
    139935679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aamu03032]
    139935679
   03036 Chromosome and associated proteins [BR:aamu03036]
    139935679
   03400 DNA repair and recombination proteins [BR:aamu03400]
    139935679
DNA replication proteins [BR:aamu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    139935679
  DNA Replication Termination Factors
   ELG1-RFC complex
    139935679
Chromosome and associated proteins [BR:aamu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    139935679
DNA repair and recombination proteins [BR:aamu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     139935679
  Check point factors
   HRAD17(Rad24)-RFC complex
    139935679
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_lid_RFC1 AAA_22 Sigma54_activ_2 Rep_fac_C DUF815 AAA_11 AAA_16 AAA_30 ABC_tran Carmo_coat_C
Other DBs
NCBI-GeneID: 139935679
NCBI-ProteinID: XP_071786302
LinkDB
Position
4:13819261..13825257
AA seq 356 aa
MSLWVDKYRPTSLSKLDFHKDQAANLRKLVQGGDFPHLLIYGPSGAGKKTRIMCTLRELY
GSGVEKLRIEHQSFTTPSKKKIEVSTIASNYHIEVNPSDVGIYDRVVIQELLKTVAQTQQ
LDSSTQKDFKVVVLTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIPAIRSRCL
GIRVAAPSVDEICQILQTTCRKEGLTLPAQLGKRIAEKSDRNLRRSLLMCEACKVQQYPF
SENQEIPVPDWEVFLRETANAIVQEQTPQRLMQVRGQLYELLTHCIPPDIIMKGLLKELI
SNCDGQLKSEITQVASFYEHRLQLGSKPIYHLEAFVAKFMSIYKRFLEEGFDDMAF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggttgataaataccgtccgacatcgctttctaaactcgattttcacaag
gatcaagcagcaaacctcagaaaactggtacaaggaggagactttcctcatctgctcatc
tatggcccatcaggagcaggcaagaagacaagaatcatgtgcactctcagggagctgtat
ggatcaggtgttgaaaaactacgcattgaacatcagagcttcacaactccatccaaaaag
aagattgaggtatcaacaatagcaagcaactatcatattgaggttaatcccagtgacgta
gggatttatgatcgagttgtcattcaagaacttttgaagacagtggcacagacacaacag
ctagactcttcaacacagaaagatttcaaagtggttgtgctgacagaagttgaccgcttg
accaaagatgcacagcatgcactgagacgtacaatggagaagtatatggccacatgtcgc
ctcattctgtgctgtaactccaccagtaaagtcatcccggctattcgcagtagatgtcta
ggaataagagtggcagcgccctccgttgatgagatttgtcagattcttcagacaacttgt
cgtaaggagggtctgaccctgcctgcccagcttggcaaacgcatcgctgagaaatcagac
aggaacctcagaaggtcattactgatgtgtgaggcgtgcaaagtgcagcagtatcccttc
agcgagaaccaggagataccagttcccgattgggaagtattcttgcgcgagacagccaat
gcaatcgtccaagagcagacaccacaacgcctgatgcaggtcagaggtcaactgtatgag
cttctaacccattgcattccacctgacatcatcatgaagggccttttaaaggagctgata
agtaattgtgatgggcagctcaagtccgagatcactcaggttgcgtccttctatgagcat
cgccttcagctcggctccaaacccatctatcatctggaagcattcgtcgctaaattcatg
agcatctacaaacgcttcctggaagaaggatttgatgatatggcattttga

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