Asterias amurensis (Northern Pacific seastar): 139935820
Help
Entry
139935820 CDS
T10870
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
139935820
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aamu01009
]
139935820
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamu04515
]
139935820
Protein phosphatases and associated proteins [BR:
aamu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139935820
Cell adhesion molecules [BR:
aamu04515
]
Cadherins
Protocadherins
139935820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
ECSCR
TMEM154
Motif
Other DBs
NCBI-GeneID:
139935820
NCBI-ProteinID:
XP_071786520
LinkDB
All DBs
Position
4:6254395..6259482
Genome browser
AA seq
1242 aa
AA seq
DB search
MKFLTITLIWILGCSLVPLVRTQEITYNIPEEEVGYHVGNLVEDLTLPTDSATRFQLLTT
ASVNLTYFELNSVTGDITTIRKIDRETVCPIRSETCQYELEVLVSPQSSFRFINIHVIIE
DINDNAPFFSEFVLPIEVPETVAIGTKIPLENAQDPDIGINSVQEYELLNDYGGKFGVFR
QRYDDNSVLLQLEVTGGLDRETRGTYLLTLLAHDGGNPSLTGSVTLNVTVLDSNDNTPQF
QQSSYAVSVEENIAIGTEILKVQAVDPDWGTNGQIQYSFSSSVTQAARQVLEIDGASGSL
SVIGILDHEQQASYQLIIQATNRVTNPVPDFTTVTIDIIDMNDNAPSLTVNALGGETNDQ
VHVLENTAIGTLIAFIKASDPDSGRSGDVRISLSNTHSDFELQEVSDGQYFIASLRALDR
ETLRGYNISVRAEDHGSPARSTVQYLLINVDDINDNAPYFSSPIYYTNIQENNIPPTPIV
TLTATDPDEGTNSDITYHLFMEGNDFAVDPSSGVVTSNIVLDREVLSTMNMRISACDKGV
PILCRNTTLVIDIDDQNDNAPLIEQSSYQFTVTENELVNSVVGYIKATDSDYGQNSQLTY
AIQDADAKVFFRIVEQTGKLLTTRNIDREERESFEFTVMVSDHGVTRQVSQVPVRVDVHD
ANDNAPNVVYPTAADDTFFIPATAEPGFLVVSVDVSDPDQGLNSQLSFSMSSGNTDGIFG
VNSAGQMITAQTIQTKWEGVHKVTVQISDGGKVPQITPLSITVVITNLDFNMSLPANVFF
KRFNLTAADFGLIDDKVPHTDNNNPITTWPVITAIVLGSTVLLLLVVIILIHFKCRARPT
SKQTYKEPSNLSNSDTVTSVEYYSESHGVQRKLSTDSSQVSITTSLSSIPSKNIMKWRAQ
AAQNGSIDSRLGNLQMTTFGSNSDVRSDTSARQTPDNDAEVQKLLHVAQLHPIHSETDAV
SDNSNRSSYDSGQGDHDYHDPHHDHYTPSDRVRSSSCPRLSNSSQQGGPYNRDHYMASPN
CTPECATLGHSDLCWDDASTPRRPRSASANVYSQQPIHKPISMYANRSTGYHGKPHGNND
RLSYDDYDNASPHHNTFPRNTGTNASQVTNTHQNGFNTGPSAKQRSNSSHSNAATSDHSN
NGKHYRNNAPPLILSPITEDPMELTDSKNSIAANDLNEEYEYPHGNTEQVYPISTLIRHK
DGTVYPRYDNYGRPHSYVGHDETEADYGYRSDVTADMTPEYY
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcttaacaataacattgatttggatcttgggatgtagtctggtacctcttgtt
cgaacccaagagataacctacaatatacctgaggaggaggttggataccatgtaggcaac
ttggtggaggatctaaccttaccaacagactctgcgactcgattccagttgctaaccact
gcatcagtaaacctcacctattttgaactcaacagcgttacgggtgatatcacgacaata
cggaaaattgatagagaaactgtttgcccaatacggagtgagacttgtcaatatgagtta
gaggtactggtctcgcctcagtcttcctttcgcttcatcaatattcatgtaatcattgaa
gacatcaacgacaatgctccattcttcagtgaattcgttcttcctattgaggttccggag
acggtagccattggaactaagataccccttgagaacgctcaagatcctgatatagggatc
aactcagtccaagagtacgaacttcttaacgactacggtggaaagttcggagtcttccga
cagcgttatgacgataactctgtcttactgcaacttgaagtaactggtgggttggatcga
gagactcgtggtacatatctgttgacgcttctagctcatgatgggggtaatccatccctc
acgggctcagttaccttgaatgtaacagtcctggattcaaatgataatactccacagttc
caacagtccagttatgctgtcagtgttgaagagaatatcgccatcgggactgagattctc
aaagtacaagctgtggatcctgactggggcaccaatgggcagatccaatactccttcagt
agtagtgtcacacaagccgcaagacaagtattagaaatcgatggagcatcgggaagttta
agtgtcataggaatacttgaccatgagcagcaggcaagctaccagctgattatccaagca
acaaatagagttactaacccagtgcctgattttactacagtgactattgatatcattgac
atgaatgataatgccccgtcattgactgttaatgccctaggtggtgagactaatgaccag
gtacatgtattggagaacactgcaattggtactttaattgcattcatcaaagcatctgat
ccagatagcggccgaagtggcgatgtccgtatatcattgtcgaatactcattctgatttt
gagcttcaggaggtcagtgatgggcaatacttcattgcgtctttgcgcgctttagacaga
gaaacactgcggggatataacatttcagttagagctgaagatcatgggtcaccagcacga
agcactgttcaatatctactcatcaatgtggacgacatcaatgataacgctccatacttc
tcttccccgatctactacaccaacatccaagaaaacaatatacctccaacgcccattgtg
actctcacagctaccgacccagatgaagggaccaatagtgatattacttatcatctattc
atggaagggaatgactttgccgttgacccttcctcaggtgtcgtaacttccaacattgtc
ttggatcgtgaggtcctgtcgaccatgaatatgcgcattagtgcatgtgataaaggcgta
cccatcctgtgcagaaatactaccttagtcattgacattgatgatcagaatgataacgca
ccactaattgaacaatccagctaccaattcacagtaactgagaatgagttggtcaactct
gtagttggttacatcaaagccacggactctgattacggccagaactcacagttaacatat
gcaatccaagacgcagatgcaaaggtgttttttcgtattgttgaacaaacaggaaagctc
ctcacgacgaggaatatcgaccgtgaagagcgcgagtcatttgagttcacagtgatggtt
tctgatcatggtgttacacgacaagtatctcaagtaccagtacgcgtcgatgtacatgat
gccaacgataacgctcctaatgttgtctacccaacggcagccgatgatactttcttcatt
cctgctacagctgagccaggtttcctagtcgtatctgtcgatgtttccgaccccgaccaa
ggattaaactcccagttatcattcagtatgagtagtggaaacacagatggcatatttgga
gttaacagcgctggtcaaatgattacagctcaaacgatacaaaccaaatgggaaggagtt
cacaaagtaactgttcaaatctccgacggcggtaaagtacctcagatcacaccattatcc
ataactgttgttattacgaatttagatttcaacatgtctctaccagccaatgtgttcttc
aagcgatttaatctaacagcagccgactttggtcttattgacgacaaggtgccacatact
gacaacaataatcccataacaacatggcctgttataactgcaatcgttctcggatccaca
gttctgctcctccttgttgtgatcatcctgattcatttcaaatgccgagcccgacccaca
tcaaagcagacgtataaagaaccctctaacctatccaatagtgatacagtaacgagtgtg
gaatactactctgaaagtcatggtgtacagagaaagctatcgacagactcctctcaagtc
tcaatcacgacatctttaagttcaataccatctaagaacatcatgaaatggagagcccaa
gcagcacagaatggatctatagattcaaggcttgggaaccttcagatgacgacgtttgga
agtaactctgatgttaggtcagatacatcagctagacaaacaccggataatgacgcagag
gtgcagaaactgttacatgtagctcaacttcaccctattcacagtgagaccgatgcggtt
agtgataactcaaataggagtagctatgatagcggacagggtgatcatgattatcatgat
cctcatcacgatcattatactccgtctgaccgagtccgatcttcatcatgcccaagactc
tccaattcatctcaacaaggaggtccttataacagagaccactacatggcaagtcccaac
tgtacccctgagtgtgcaacactagggcactctgacctatgctgggatgatgcatcgaca
ccgcgcagaccacgttcagcttcagctaatgtctactcacaacaaccgatacataaaccg
atcagcatgtatgcaaacagatctacgggataccatggaaagcctcatggaaacaatgac
agactatcctatgatgattacgacaacgcttccccgcaccataatactttcccaagaaac
actggtaccaatgcttcacaggtaaccaacacacatcaaaatggcttcaacacaggacca
tcagctaaacaacgatctaatagttcacacagcaacgctgcaacatcagaccatagtaat
aatggcaaacattacagaaacaatgcaccaccattgattttatcgccaataacagaggat
ccaatggaactaacggatagtaagaactccatagcagcaaacgatctcaatgaagagtat
gagtatccccatggtaacactgagcaggtttatccaatcagcacgttgatacgtcataaa
gatggtacagtgtatcctaggtatgacaattatggtcgccctcactcctacgtaggacat
gatgaaacagaagcagactatgggtaccggagtgacgttactgctgacatgactcctgaa
tattattga
DBGET
integrated database retrieval system
