Asterias amurensis (Northern Pacific seastar): 139935824
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Entry
139935824 CDS
T10870
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139935824
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139935824
Factors involved in mRNA localization
Other mRNA localization factors
139935824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
DUF4145
BP28CT
Motif
Other DBs
NCBI-GeneID:
139935824
NCBI-ProteinID:
XP_071786521
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All DBs
Position
4:complement(10648823..10683972)
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AA seq
1270 aa
AA seq
DB search
MEPAGEDQETNLTSGKMAAATVTLEDALSNVDLLEELPLPDQQPCIEATAVSITYQANFD
TNFEDRTAYVTGMSKYIEEATVHSELNKLLEEGESYAVNLYTWRSCSRAMPAIKSNDQSN
RVEIYQKFVEVIEPEVTKLVNFMYFQQRAIDVFCRDVKRLCHSERKKDFVSESYLLTLGR
LINMFAVLDALKNIKASIRNDYAAYRRAAQFLRVMADPNALRESQEVVMFLANNDKITQT
LKENLTKIDGYEELMIDIINLCMEMYEARQFVVPSEKHVLVKVLAFGLFLLDSKEINIYK
LDQKKRININRIDKIFKQLEVVPLYGDIQIPVFSYIKKGPNYEAHKSSWSCDSSNGSQYN
LLEHLSSIREDHTRYISQLARHSNKEMTTAMKNTGRSEAENKQLYNLALKGLCLLSKWTS
LVTELFSWKLIHPADKRTNPKIPDTAEEYEKATRYNYSSSEKFALIEVIAMIKGLQVLMT
RMESVFQEAILRTTYAEVQDFAQKTIRDGLRTAIKKKKKLIETIIRAVRETCCDWEKGCE
PRDDPCLKGEKDPKTGYTLKVPRRTVGPSSTQLYMIRTMLESLIADKGGTGKKTLRKELD
GSSLEAIDDFHKRSFFYKHLLNFSETLQQCCDLSQLWYREFFLEMTMGDRIQFPIDMSMP
WILTDHILETKDPAMMEYILYPLDLYSDSAQYALTRFKKQFLYDEIEAEVNLCFDQLVYK
LSDQIFAHYKALAASILLDKRFRTECEIYGIGIAYPPANRYETLLRQRHLQLLGRSIDLN
RLITQRISTAMYKSLEIAIIRFESSDLTGIVELDCLLEVNRLTHSLLSKHMKLTNFGSML
REANHNVMAPYGRITLHVFWELCSDFIVSFCYNGSTERFVRTKLAFVQPHNRDKPPSSSP
SYIYGSKLLNTAFATVNSLYNSFVGIPHCRCIARLLGYQGIAVVMEELLKVIKRSMNDYI
LPYVKLLMEVMPKSCKLPRFEYGTKGVVAYYSAHLQDIAQYPDLKMNLFHNFQEIGNAII
FMKMMEQCLAVEEVCDLLHASPFQNIIPKPHVKQGEKLENKLKRLEINYAPLQVVPVVEK
MGTQEQIADAREGDLLTRERLCCGLTMFEIILHRIKGFLSDTILQGPEPANGVMIIDECS
EFHRLWSAFQFVYCLPLKEHNFTPEESYGEGLNWAGCALITLLGQQKRFEALDFCYHILR
VQKVDGVDADINGIPIGRLVDRIRKYQILNNQIFSVLNKYLKANESDTTPVEKIRCYQPP
IHQSVIDGGM
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagccggagaggatcaggaaaccaacctgacaagtggcaaaatggccgccgcc
actgtcacactcgaggatgccctatccaatgtggatctcctggaggaattaccactccca
gaccaacagccatgtatcgaagctacggccgtctccattacgtaccaagccaactttgac
accaactttgaagataggacggcttacgtgacgggaatgtccaagtatatcgaggaagca
actgttcattctgaactgaacaaactgttggaagaaggagagagctacgcagtcaacctg
tacacatggagaagctgctccagggctatgcctgctatcaaatcaaatgaccagagcaac
cgtgtggagatctatcagaagtttgtggaggtcattgaacccgaggtcaccaaactggtc
aacttcatgtacttccagcaacgagccatagatgtgttctgccgtgatgtgaaacgtctg
tgtcactctgaaaggaaaaaagactttgtctctgagtcgtacctgttaaccctgggtcgt
cttattaacatgtttgctgtattagatgcactgaagaacatcaaagctagcatcaggaat
gattacgctgcatacagaagggcggctcagttcctacgagtcatggctgacccaaatgct
ctgcgtgagtcccaggaggtagtgatgttcttggccaacaatgataagatcacccagaca
ctgaaggagaacctgacaaagattgacgggtatgaagagctcatgattgacatcatcaat
ctgtgtatggagatgtatgaagcgcggcagtttgtagtccccagtgagaagcatgtactg
gttaaggttttggcatttggtttgttccttttggatagcaaggaaatcaacatctacaag
ctagaccagaagaagcgcatcaacatcaacagaatagacaagatatttaagcaactggaa
gttgttcccctctacggtgacatccagatcccagtcttctcttacatcaagaagggtcca
aactacgaggctcataagtcctcatggagttgcgactccagcaatggctcccaatataac
ttactggagcacctctcatcgatacgtgaggaccacacaagatacatcagccagcttgct
cgtcatagcaacaaggagatgaccacagcaatgaaaaacaccgggcgctctgaagctgag
aataagcaactgtacaacctggctctcaagggactgtgcttactatccaaatggacttct
ctggtcactgaactgttttcgtggaagttgatccatccagccgacaagcgcactaatcca
aagataccggacacagcggaagaatacgaaaaggcaactcgttacaactacagtagcagt
gagaagtttgccctgattgaagtgattgctatgatcaagggtctacaggtgctaatgaca
cgcatggagagtgtgttccaggaggccatcctgcgcacaacgtacgccgaggtgcaagac
tttgcacagaagaccatccgagatggtctccgcacagcgattaagaagaagaagaagctc
attgaaacgattatccgtgctgtacgtgagacatgctgtgactgggagaagggttgtgag
cccagggatgacccatgcctcaagggagagaaggaccctaaaactgggtacacactcaag
gtacccaggaggacggtgggaccctcaagtacacagctgtatatgatccgtactatgttg
gagtcactgatagcagacaaaggaggcacaggcaagaagacgctccggaaggagcttgat
gggtcctccttggaggctattgatgacttccacaagagatccttcttctacaagcatctc
ctcaatttctcagagacactgcagcagtgttgtgatctgtcccagctgtggtatcgagag
ttcttcctggagatgacaatgggagatcgtatccagtttcccattgacatgtcgatgcca
tggattctgactgaccacatcctggagactaaagacccagctatgatggagtatatcctc
tacccattggatctgtacagtgacagcgcacagtatgccttgacaagattcaagaaacag
tttctctatgatgagattgaagcagaggtgaacctgtgctttgaccagcttgtgtacaaa
ctcagtgatcagatctttgctcactacaaggcactggctgcaagcattttgttggataag
cgtttccgtaccgagtgtgagatctacggtatcggcatagcctaccctcctgctaacaga
tatgagactctactcagacagagacatctacagctgttgggtcgctcaattgatttgaat
cgtctgatcactcaaagaatcagcacagctatgtacaagagtctggagattgccattatt
cgttttgagagcagtgaccttacaggcattgtggaattagattgtctgcttgaggtaaat
cgtttaacccactccctcctgagtaaacacatgaagctgacaaactttggctctatgctg
agggaggccaatcataacgtcatggcaccgtatggacgcattactcttcatgtcttctgg
gagctctgctctgacttcatcgtatcgttctgctacaacggctccacagaaaggttcgta
cgcaccaagctggcgtttgtccaaccacacaacagggacaaacctccatcctcatcacca
tcctacatctatggcagtaagttgctgaacactgcctttgcgacagtcaacagtctgtac
aactcattcgttggaatcccacactgccgttgcattgctcggttgcttggctaccagggt
atagcagtcgtcatggaagaactcctcaaagttatcaaaagatcgatgaatgactacatc
cttccatacgtaaagctcctgatggaggtcatgccaaaatcatgtaaactaccaagattt
gaatatgggaccaaaggcgttgttgcttactactccgctcacctccaagacattgctcag
taccccgacctcaagatgaacctcttccacaacttccaggagattggtaatgccattatc
ttcatgaagatgatggagcagtgtctggccgtggaggaggtttgtgatcttctccatgct
tcaccgttccagaacatcatcccaaagccacatgtcaaacagggtgagaagttggagaat
aagttgaagaggctggaaataaactatgctcctcttcaagtggtgcctgttgttgagaag
atgggaacacaagagcaaatcgccgatgcaagagagggtgacctgctgaccagggagaga
ctctgttgcggactcaccatgtttgagatcatcctacaccgcatcaagggattcttatcc
gacactattctgcagggtcctgaaccagcgaacggtgtcatgatcatcgatgagtgctcc
gagttccacagattgtggagtgccttccagtttgtctactgccttccactcaaggagcat
aactttacaccagaggagagctatggtgaagggctgaactgggctggctgtgccttgatc
actctgcttggacaacagaaacgctttgaagcgctggatttctgctaccacatcctacga
gtgcagaaagtggatggtgtagatgcagacatcaatggcattcccatcggacgtctcgta
gaccgcatccgcaagtaccagattctgaacaaccaaatcttctctgtactgaacaagtac
ctgaaggcaaacgaaagtgacaccacgcctgtagagaaaatacgttgctatcagccacct
attcatcagtccgtcattgatggaggaatgtaa
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