Asterias amurensis (Northern Pacific seastar): 139936002
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Entry
139936002 CDS
T10870
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04080
Neuroactive ligand-receptor interaction
aamu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139936002
04082 Neuroactive ligand signaling
139936002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aamu04040
]
139936002
Ion channels [BR:
aamu04040
]
Ligand-gated channels
GABA-A
139936002
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF2852
Motif
Other DBs
NCBI-GeneID:
139936002
NCBI-ProteinID:
XP_071786797
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Position
4:24787508..24842580
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AA seq
526 aa
AA seq
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MVIMNVGLLVTAFVELWSIFLLFVHVLDVGNCSAVEYYSGMSDNISAAIKRMTEGYDIRL
RPRFGGPSINVGIEIEVISINSISEVNMDYTISMYLRQHWKDERLKYDSRLGNLSLDGRL
ADVIWVPDTYLANDKSSFVHDVTVKNRLLQLSCDGSVIYGMRITTVASCMMDLRHYPMDQ
QNCTLEIESYGYTLTDLSYSWQYGGKSVLGMDDIEIAQFTITEWKLVSRIQTFSTGAYPR
LSLSFLLKRNIGYFVLQTYLPSILLTILSWVSFWINHEATSARVALGITTVLTMTTISTS
VRQSLPRISYIKSIDIYVVTCFGFVFAALLEYAIVNFNYWSQHKRKAKEALKSATACSST
PTTDNNANSSNNASNLRTRKFRDNTYQQLQLNQSVGQRLSGRDPNDPNDVEVMEEIPMNR
LNGLEGTETHVRKPSCTGGKVRRRSSGTNYRHTPPWFGPGSSGRARNSTLRRRTIRVHLP
KVRNVHIIDSYARILFPSLFIIFNIVYWSVYLMWQQQWKNNQTWSE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcatgaacgtgggtttactcgtgacagctttcgtggaattatggagtattttt
ttgcttttcgttcacgtcctggacgtcgggaactgcagtgcggtggagtactatagtgga
atgtctgacaatatatcggctgccatcaaacgcatgaccgaggggtatgacattcgactt
aggccccgtttcggaggtccctccattaacgttggtattgagatagaagtaatatccatc
aacagcatatcggaggtcaatatggattacaccatatcaatgtatctacgtcagcattgg
aaagacgaacggctaaagtacgacagccgattaggcaatctctcattggacggcagactc
gctgacgtcatatgggtgccggacacttacctggccaatgacaagagctcttttgtacat
gacgtcaccgttaaaaatagacttctacagttaagctgcgacggcagcgttatctacggc
atgaggattacaacagtagcgtcttgcatgatggacttacggcattatcccatggaccaa
cagaactgcactctggagatagaaagctatggctatacactgacggatctctcgtattcg
tggcagtatggtggcaagtcagtccttgggatggacgacattgaaatagcacagtttacc
atcacagagtggaaactggtgtccagaattcagaccttctccacgggagcgtatcccaga
ttgtctttgagcttccttctaaagagaaacattggttactttgtgcttcagacgtacctt
ccttccattctccttactatactctcatgggtgtctttctggattaaccacgaggcaacg
tcagctagagtcgccttaggtataacgacggtgctcaccatgacaacaattagtacaagc
gttcgtcaatccctcccacgtatctcctacatcaaatcaattgacatctacgtggtcacg
tgtttcggtttcgtgtttgctgccctcctcgagtacgccatcgtcaactttaattattgg
tcgcaacataagaggaaggccaaggaggcattgaagagcgccaccgcgtgttcgtctaca
cccaccacagacaataatgccaacagtagtaataatgcttcgaatcttagaaccagaaag
ttccgcgataacacgtatcaacagcttcaactaaatcaaagtgttggtcagaggctgtca
gggagagacccaaacgaccccaacgatgtcgaagtcatggaagaaatcccaatgaacagg
ctgaatggactcgaagggaccgagacccacgtccggaaaccttcatgcaccggaggcaaa
gtccggcgacggtcgagcggtaccaactaccgtcacaccccgccgtggttcggtccgggt
agctccgggcgggctaggaactctacattacggagacggacaatacgggtgcacctcccg
aaagtgcgcaatgtgcatatcatcgatagctacgccaggattctattcccgagtctcttt
atcattttcaatattgtctactggagtgtgtatctgatgtggcagcaacagtggaaaaac
aatcaaacttggagtgaatga
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