Asterias amurensis (Northern Pacific seastar): 139936020
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Entry
139936020 CDS
T10870
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139936020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139936020
03036 Chromosome and associated proteins [BR:
aamu03036
]
139936020
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139936020
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139936020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
DUF2336
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
139936020
NCBI-ProteinID:
XP_071786819
LinkDB
All DBs
Position
4:7769818..7860274
Genome browser
AA seq
1901 aa
AA seq
DB search
MFGANKTPFGGSSFGTGNFSSPHSTPHGQRTNAFSAKTPGTSGFGTPTAFGAQTPSTGLF
GTGTSAAGGLFGSTGNTFGQPPSGIGFGTSNTSSAAGTLFSSTSNAGTTGLFSTPSTSTS
FGAGGFGAAKPFGAAPSTGLFGQTAAATAPFGQAAAGASTLFGGGASSGLFGATAQSGTT
VKFAPVTSTDTMVKSGVTTNVSTRHLVITAMKEYENKCFEELRMEDYAANRKGSSGSSLL
GHGMTQVDNKPASLFGQQQQAAASSGAGFTFGQNKPTFGTGTSTFGTASGSLFGAQPQQQ
AAGLFGQKAGGFGTTSAPGASLFGATSTSAFGQSNQANKGLFGQTATTQSTGLFGSTPAA
SGTTGFGTGFGNTAFNQNQPTSLFGAKAGFGTTTTSTGLTLGSTTGTGLFGQQNKTGLSL
GTGASTGFGFGATPNQSASLFANKGTTGFGGLGAGIGTGLGTGFGATNTGTSLFGAASKP
TTLGGLGGFGTTSTGLGGGFGTGTGLNLGGATTGLGNATANLTVQDAQAQQQLLAIFNSP
FGDNPLFRNRLTDSDKREDILKPTSKAAQKALSSPLQHKVSSRPSAKLRPKPLIQGVSHK
SKLFDGLDDEDLTLNTEMFVPRRSVKKLVIKKKDDKSMEEDHLLNSSRSLAQEETLLSPL
PTYPSNPSSKPSPNQRQGSLDNEEVLETPGGPRLFSKPQSHQNDIPTTSSPRKQEDPDCT
ITDLNVQSKPSSKVNSSELSSTSDLDHSSLPDIQDDQENTPPPNPAGVTLRRSGYYTIPP
LEDLGSLMGENGECYVEDLTIGRSGYGSVFFPGFTDIAGLNLDEIVHFRRKEITVYPDDT
TKPDVGQGLNKKAEVTLDRTWPTDKTSRKAITDTERLTALNYEEKLEKATAKLGAKFIEY
RPKTGSWVFLVQHFSKYGLSDSDEDDEAPSQDPKKQKTQKQPGQKPTGAKKVSTKPAVKQ
PPKVGLDSRSQPIREQQEEEPMGDDIDMEMPGDSPIRGLGGFYLNGHVEAADANQRGLSS
DQEELEEGLDHAASSHRLANVLGMNSHRLQVMKGSFFADDEPVEYDYALRSAPSQPRPSF
FDSPSRGSPIPIMEESYQERGLNRSMGGGVLWPRPMGSPAKYLAGMGPTADVRASPTPRA
VKDELLDPSDHYMSGLFAAPKQYPALTGPHHYPSGMTQDRPSRLVGSRPRQTILPLKQSV
ICGKVPCIADAGLVMSRSFRVGWGPNWTLVHSGKAVGQRMSALDIKQEPATFPLLTAKQP
SKSSLDATPFTITVEKLNLAPHLLGADSKILDLHERSLGVQLHHSVCSTSQTCPVFAPKP
GVDCLHDFAKTAMKDCQERLTADETTLEHGQLVWKLMVALWGRLPDEDQQELDPSGYPFH
KARREAFSRWLESGSGKRINREVQDSKFKDMGHIEAVFSLLTGHQISAACAAAQRSGDHR
LALLLAQAGSTQEIKQLVTKQLSDWHEMGVDRFIAPEYLQVYALLAGQLVWQSSHDSINT
CQNLDWKRALAVHLWHACKPVASIQDALAEFDKGFHGESTLGRYCPVPRPPYMENNPEVY
PEDGGMEYEEGEIDGYTVWDMCYHLVKLYTDHTHRLERVLAPTTHTAYQLDYRLSWHVLH
ALQALGYSHISEQDLNHLHVSFASQLEGLGLWHWAVFVLLHIQDDCRRESVVKALIMRQC
TLKRSEANSAKERFLVGQLNVPVKWINEAKALKALYEKRPHQQAWHLLEAGHWNDGHSVI
IKHLAADAIINENYDYLLGLLKKVVPTDRSIMIQDWTTNGQVFLDFINIVKRLENLQHSN
PTVYELEKLYPDVASLCSRVGSVTCCTAKDRLCQSEMAKRTANVMKAVLTLQQQSLYPGK
NVRIPSRLLAPHVGKLPMPEDYGLQELRELTRSYMVELTTA
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggccaacaaaaccccctttggagggtcatccttcggaacaggtaacttctct
tccccacattctacccctcatggtcagcgtactaatgcctttagtgccaagaccccaggc
acgtctggatttggaacgccaactgcttttggcgctcagactccttctactggtctcttt
gggacgggaaccagtgcagcaggggggctgtttggcagtacaggaaacacctttggccag
ccaccgtcaggtattgggtttggtacttcaaatacctcttctgcagcagggacgctattc
agcagtacatcaaatgcaggaactactggactattctcaactccatcaacttcaacatca
tttggtgcaggaggatttggagctgccaaaccatttggagcagccccttctaccggtctt
tttggccagactgctgcagccacagcaccatttggccaggcagctgcaggagcgagtacc
ctgtttggtggtggagcatcatcaggattgtttggtgccactgctcaaagtggtaccacg
gtcaaattcgctccggtgacaagtacagacacaatggttaaaagtggagttacaactaac
gtcagcacaagacacctggttattacagccatgaaggaatatgaaaacaaatgctttgag
gaattgcgaatggaggactatgcagccaacaggaaaggctcgtctggttccagcctcctt
ggtcatggtatgacccaagtagacaataaacctgctagtctatttggtcaacaacaacaa
gctgctgcctcctctggagccggattcacatttgggcaaaacaaaccaacatttggaaca
gggacatccacttttggaactgcatctggaagtttgtttggtgctcagccacaacagcag
gctgctggcttgtttggtcagaaggcaggtggatttggtacaactagtgcgccgggagca
tccctatttggagcaacaagcacctcggcatttggacagagtaaccaggctaataagggt
ttatttgggcagacagctacaacacagagtactggcttgtttggatccactcctgcagct
tctggtacaacaggctttgggactggcttcggcaacacggctttcaatcaaaatcagcca
accagcctattcggagccaaagcaggttttggaaccactaccactagtacagggctaaca
ctgggttctactacaggtacagggctgttcggtcaacaaaataagacaggtctgtctctg
ggaactggcgcttcaactggctttggcttcggtgccactcccaaccagtctgccagtctg
tttgcaaacaaaggaacaacaggttttgggggtctaggagctggcattggcacagggctt
ggtacaggatttggggcaaccaatactggcacatcattgtttggcgctgctagtaaacct
accactctaggtggacttggtggatttggaacaacatcgactggtctaggtggtggattt
ggaactgggactggcttgaacctaggaggagcaactacagggctgggaaatgccacagcc
aatctgacggttcaggatgcacaggctcagcagcaacttttagcaatctttaactcgcca
ttcggagataatcctctcttcagaaacagactcacagattctgataaaagagaggatata
ttgaaaccaacaagtaaagctgctcagaaagcacttagctcacctcttcaacacaaggta
tcatcaagaccctctgctaagcttcgtcctaagcctctaattcaaggtgtctctcataag
tcaaagctgtttgatgggctagatgatgaggacctgactcttaatactgagatgtttgta
ccaaggaggagtgtcaagaaacttgtcattaagaagaaagacgataaatccatggaggag
gatcatctgttgaattccagtcgctctttggcacaagaagagactcttctatccccactg
ccaacttatccgagcaacccttcctcaaaaccatctccaaaccagagacagggttctctg
gacaatgaggaagtattagaaacacctggaggtcccagactattctccaaaccccagtca
catcaaaatgatatcccgacaacatcaagtccacggaagcaagaggatccagactgcacc
atcactgacctgaacgtccaatccaaaccttccagtaaggtcaactctagtgagctatcc
tccaccagtgatctagaccactcctccctgccagatatccaagacgatcaggagaatact
cctccacctaaccctgctggtgttacattgagacgatcagggtactataccatcccaccc
cttgaggacctgggctcattgatgggtgagaatggagagtgttatgtggaggatctgacc
atcggacgcagtggatatggaagcgttttcttccctggatttactgatattgctggactg
aatctagatgagatagttcattttcgacgtaaggagattacggtctacccagatgacact
accaagccagatgtgggtcaagggctgaataagaaagcagaagtaacactggatcgcacc
tggccaactgataagacttcccgcaaagctattacagatactgagcgacttacagctctg
aattatgaggaaaagctggagaaagctacagccaagctaggcgctaagttcattgaatat
cgacccaaaactggatcatgggtcttcctggtccaacatttctccaagtatggactgtca
gatagcgatgaagatgatgaagcgccctcacaggatccaaagaaacagaaaacgcagaag
caaccaggacaaaagccaacaggagcaaaaaaagtatccaccaagccagcggtaaaacag
cctcctaaagtgggcctggatagtcgtagccagccaatcagagagcagcaggaggaagag
ccaatgggagatgatattgatatggagatgcctggtgattcaccaatcagagggctcggt
gggttctatcttaacggacacgtagaagcagccgatgctaaccagcgggggttgtctagt
gatcaggaggagctggaagagggtcttgatcatgcagcgtcttcacatcgtcttgctaat
gtcttaggaatgaactctcatcgcttgcaggtcatgaagggctcattctttgctgatgat
gaacccgttgaatatgattatgctttacgctcagctccatcccagcctcgaccctcgttc
tttgactctccatctagaggatcccccattcctataatggaagagtcctatcaagaaaga
ggattgaataggagcatgggaggtggagtgttgtggcctcgtcccatgggtagtccagcc
aaatatctggctggtatgggccctacagcagacgtcagagctagccccacacctagggct
gttaaggatgaactgcttgacccttcagaccattatatgtctggtttatttgctgctcct
aaacaataccctgccttgactggtccccatcattatccaagtggaatgacccaagaccga
ccatctagactcgttggatctcgccctcgtcagaccatcttaccactcaagcagtcagtg
atatgtggtaaggtaccctgcatagcggatgctggcttggtcatgagtagatccttcaga
gtgggttggggacccaactggactctggtgcattctggaaaggctgtcggacaacgcatg
agtgctctagatatcaagcaggaaccagccacctttcctctcctgacagctaaacaaccc
agcaagtcatccctagatgcaaccccattcactattactgtagagaagctgaacctagcc
cctcatctactgggtgctgacagcaagattctggatcttcatgagcgatccctaggagta
cagcttcatcacagcgtctgttctactagccagacatgccccgtgtttgcccctaagcct
ggggtagattgtttacatgactttgctaagacagccatgaaggattgccaggaaaggctg
actgctgatgagactaccttagaacatggccagctggtatggaaactcatggtagcactc
tggggacgcttaccggatgaagatcaacaagagcttgatccatctggttacccgttccac
aaggccagaagggaagcgttctcacgatggcttgaatctggctcagggaagagaatcaac
agagaggttcaggactccaagttcaaggatatgggacacattgaagcagtgttctcgtta
ctgactggacatcaaattagcgcagcatgtgcagcagcccaaaggtcaggtgaccacagg
ctagctctactattggctcaggcaggaagcacccaagaaatcaaacagttagtcacaaag
cagctcagcgattggcatgagatgggcgttgataggttcatagctcctgaatatctacaa
gtgtatgctctattggctggccagcttgtatggcaatcatcacatgatagcatcaataca
tgtcagaatttggactggaagagagccctcgctgttcatctctggcatgcttgcaaacca
gtagcatccatccaggatgctctcgcagagtttgataaaggtttccatggagaatcaact
ctgggtcgctactgcccagtgccacgtcccccgtatatggagaataatcccgaggtatac
ccggaggatggaggtatggaatatgaagagggggagatagatggctacacggtttgggat
atgtgttatcatctagtcaagctgtatactgatcatacacatagattggagagagtattg
gcaccaactacacatacagcataccagttggactacaggctcagctggcatgttttacat
gctttacaagcattgggttactcccatatctcagagcaggatttaaatcatcttcatgtt
agctttgcctcacagcttgaagggcttggactatggcactgggctgtctttgttttgctc
cacattcaagatgattgccggcgagagtcggtggtaaaggcgctcataatgcgacaatgc
acactgaagagaagtgaagcgaattctgctaaagaaaggtttcttgtcggtcaactcaac
gtgccggttaagtggatcaatgaagctaaggcgttaaaggctctgtatgaaaagcgtccc
catcagcaggcctggcatctgctggaagctggtcactggaacgatggtcactcggttatc
atcaaacatcttgctgctgatgctatcattaatgagaactatgattatcttttgggtctg
cttaaaaaggtggtgcctacagaccgttccattatgatccaagattggacaactaatggg
caggtcttcttagatttcatcaacatagtaaagagattggagaaccttcagcacagtaac
cccacagtgtatgagttagagaagttataccctgatgttgcatccttatgtagccgtgta
ggaagtgtaacatgctgtacagccaaggatagactctgccaatcggagatggccaaaagg
actgctaacgtcatgaaagcagtacttactctacagcaacaatcactgtaccctggcaag
aatgtgagaataccatctcgtctgctggctccacacgttggtaaacttcccatgcctgaa
gactatggactacaagagcttcgagaactcactcgcagctatatggtggaactcaccaca
gcgtga
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integrated database retrieval system
