Asterias amurensis (Northern Pacific seastar): 139936920
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Entry
139936920 CDS
T10870
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139936920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139936920
Spliceosome [BR:
aamu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139936920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
139936920
NCBI-ProteinID:
XP_071787847
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Position
5:complement(22955401..22966885)
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AA seq
668 aa
AA seq
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MAMSLSKRDLDDMRPMVDDIVRKVLGFSESSVTMAALNCVSKGMSKTKTIDLLKPLIDQS
APKFVEKLFEAIEQSHINRDDHKAKKRPIKDEEIIDIKAKKPKTRFESSEQEEEPTAMEQ
WTPQQIKDMMASARLQIMAKQDQKPTRPQRQPLPPPSVPAPNATPQVLMNDAMDKARRAA
EIQNRIQASMATAGLGQLVLQQALAGVSMKQAESALVGDKQPAGPVSKPTPLILDDQGRT
VDAAGKEITLTHRVPTLKANIRAKRREEFKMNQSEKPQDAVNEASKFFDNSLAQAPVQRS
RRLFKFHEEGRFEQLAQRIRAKSQLEKLQNEIAQAAKKTGISSATKLALIVPKKELKEGE
IPDTEWWDTFILPRDSYVDCRRQEASSSKGTPEKYVGITKLVEHPIQINPPVETTQTVTM
PIYLTKKERKKLRRQTRREIQKEIQEKVRLGLEPPPEPKVRMANLMRVLGNEAVQDPTKV
EAHVRAQMAKRQRTHEEANAARKLTADQRKEKKVRKIKEDTSAGINVTVYCVRNLKNPAH
RFKVEANANQLHMTGMAISHKDVNVVVVEGGPKQQKKFQRLMMHRIKWGKDKKRGDIDSD
DSDNESETKANECTIVWQGLVKQRNFSELKFKQCVTESMAREQFRKHGVEHYWGLAHGQR
IMEATEDV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtccctgtctaagcgagatttggacgatatgcgaccaatggtggatgacatc
gtgagaaaagtgctaggattttcagagtctagtgtcacgatggctgcattaaactgtgtc
agtaaaggaatgagtaagacgaaaacaatcgacttgttaaaacccctgatcgaccagtca
gcaccaaagtttgtggagaagctttttgaggccatcgagcaaagtcacattaacagagac
gaccacaaagcaaagaaaagaccgattaaggatgaggagatcattgacattaaagctaag
aagcccaagacgaggtttgagagtagcgaacaagaggaagagccgaccgcgatggagcag
tggacaccccagcagatcaaagacatgatggcctcagccaggctacagatcatggccaag
caagaccaaaagccaacaagacctcaacgtcaaccacttcctccaccctctgtaccggcc
cccaacgccacccctcaagtcctgatgaacgacgccatggacaaggcaagaagagcagct
gagatccagaatcgcattcaagcctcgatggcgacggccggcctgggccagctggttctt
caacaggccctggccggggtcagcatgaaacaggctgagagtgctcttgtaggggacaag
caacccgctggcccggtttcaaagccaactcctttgattctggatgatcagggtagaaca
gtcgatgctgctggaaaggaaattacattaactcatcgggtaccaacattgaaggcaaac
atccgagccaagaggagggaagaattcaaaatgaatcaatcggagaagccgcaggatgca
gtcaacgaggcctccaagttctttgacaacagccttgcccaggcgccggtgcagcgcagc
cgacgattgttcaagttccacgaagagggacggtttgagcagctggctcagagaatcaga
gctaagtcgcaattagaaaaacttcagaatgagattgcacaggcggcaaagaaaaccgga
atttcgtcagcgacaaagcttgcactcattgttccaaagaaagaattgaaagaaggtgag
ataccagacacagaatggtgggacaccttcatcctacccagggattcgtacgtggattgc
agacgccaggaagccagcagtagcaagggtaccccagagaagtacgtgggtatcaccaag
ctggtggagcaccctatacagatcaacccacctgttgagacgacacagactgttacaatg
cccatctatctaaccaagaaagaacggaagaaactgcggaggcagacaagacgagaaatc
cagaaagagatccaggagaaggtgcgactcggactggaacctccgccagaaccaaaagtg
aggatggccaacctgatgcgtgtattgggcaatgaagccgtccaagaccctacgaaggta
gaggctcatgtcagggcacagatggcaaagagacagagaactcacgaggaggccaacgct
gcgcgcaaactgaccgcagaccaacgcaaagagaagaaggtacgcaagataaaggaggac
acgtcggcggggatcaacgtgaccgtgtactgcgtgaggaatcttaagaaccccgcccat
cgcttcaaggtagaagccaatgctaaccagctgcatatgacaggcatggcgatatcgcat
aaggacgtcaatgtagtggtcgttgaaggagggcctaagcagcagaagaagtttcagaga
ttgatgatgcatcggatcaagtggggcaaggataaaaagagaggagacattgactctgac
gactcggacaacgagtcggagaccaaggccaacgagtgcaccatcgtctggcaaggactg
gtcaagcagcgcaacttcagcgagctgaaattcaagcagtgcgtgacagagtccatggca
agggagcagttccgcaagcacggcgtggaacactactggggcctggcccacggtcaacgc
atcatggaggccacagaggatgtgtaa
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