Asterias amurensis (Northern Pacific seastar): 139936946
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Entry
139936946 CDS
T10870
Name
(RefSeq) intermembrane lipid transfer protein VPS13A-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
Membrane trafficking [BR:
aamu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139936946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139936946
NCBI-ProteinID:
XP_071787901
LinkDB
All DBs
Position
5:complement(25522291..25610814)
Genome browser
AA seq
3290 aa
AA seq
DB search
MVFESLVVDLLNRFLGQYIENLDASQLKLGIWGGDAVLQNLDVKEGALNDLDLPVKIKSG
HLGKLTLKIPWKNLYSAPVEATIEGLYVLVVPNADIKYDAEKDSQQKFEAKQRTLQMVED
TKQKEKEREEGAEKDAKADSFVEKMASQVIKNLQVKVSDIHMRYEDKTTNPNAPFSIGTT
LHNVSLKTTDTNWKECLADAATKLIYKMLRLDCLSVYWNSNSELYSDLPRPQQQAKMRET
ITSDPTKTPKNYQFLVEPISLKAQLKLNTKPENDMANPKAWLNLVIDSIGLAVRQKQFRD
VMKMLDSFERMSRNEPFRKYRPTCPTKGNAKIWWHYAQKCILEETVRRRHKMWSWTHIKE
HRRMCREYQKQYVTKLDTSKPGKDLTAQLESLEKELSVMNITMCRQRAEVEFHRLGKKRA
KEKAEKGWFGGWLGGGKKKDEKKEAGDLSDIAGRFQEAMSEEEKAKMYSAIGYSDKSVDP
TFPKDYVGIQAHMNLKSTTVKLLDEERPLPQLLNLSVTDLTADFKQRPSAEAIKLDLKLD
DFSVFGTPLEQGKIPQLVESQNLEADKQYALVSLLVEVNPSDGKADQRIRLNTRPIKIAY
DANTINQIAKFFEPPKDIHLDDLSSAAVSSLGEFTVQSSTGMQYLVDNKSILDVCIDLKP
SYIIIPENGVNDGTGSALIVDLGNLKLNTVNEERHEEPRRENESLDDLMKKAYDVFNIEL
QSVQVILAAAGDDWGEARKLGGSPLHLLQPLDLKVGLHKCFVEDSRLAQIKITGELPDVT
VDVSDYKLQELLKLALSIPIPESSKEPEEKFSRDKLFVSSDQSLGVAIDGSLSVVSLEQP
NDSSDSDEYFSASEIYFDQRDPLLPADKPITAPVGKEVVKAGEESLADTQRTSLELQFEL
KKVGLNLSQRCSGEEKPLISVAIQALGTQVRMRPWDMSATVSLGSVSVQHRQFKALDGGD
LFLVRTPAYEKGTDRLLSINYQKAEKKSPEFATTYQSTEQDITVKFTTLEIVAHSDAILN
LTDFADTLVASLDTGKGAASGAEPEDEGYLSEDEKKPKGKRVKRLKPSDTIDVKLTANLD
VISLVVCTKDTSLTEVNIKGLKAGVLLQKHVTTVTALLQDITVTDPTPGALYPKIVSFVD
DEVFKVKAELFNGATAADGYSDMSAVDIRVGLSMGRMRAIFLNKFVMRLLSFVDQFSRAK
AAAAEASANAALAAKKTAENMQERCIRIALDVVIKAPLIIIPKSSTSDMALVADLGQLLV
QNSFSMAAGTESMELPAVLEAMQVALQSIQLSRAVLQGGRIKSEVLMLEPMGLNIDLVRN
LAASWYHKTPAIALSGKLQPIRFSIGPDDFALVMGILNKNLAEGQLEVAEAESPSASGGE
VPPAEGGAAAASDVKSAAKEETKADVPASETTEEPWEQICVDFELEGIYTSLYTGKLDLR
PLEGRQERIPHEALGCFAVCQLGVKASIQSNLAITANAKLAKILLDDIRPGRGDAITRML
GSHGDDQDLETITVKFEQMANQDKNIEASVRNFHACVCAEFLMTVAEIFTKGLEESAVPK
PEDKDKKPVKKAMQTPNNTPAGTPDAQESTQQGVITVKAILDSPEIVLVSDSSKKDTNAL
VLKTMGEVNLTMSDNAMYIKGGLQQLRINACPYLEQHRIGKMTKVLVPCNVDFNLNAPNA
KGQHISLMIEEIALNISPEVIKILSSVSQTLTPTKPETDEEKRSKAIVPVDLWDAKKVSE
HNFWFFKEEEGIDVNTLLEEAVVVAVEQSRGEELVATIKSVIIKLEASVGRRTVPMLTVD
ASVEAVVKDWSTKLHVETHMTTEIACYNEKVSAWEPLLEPLEAEAGQHKPWDLSLDIVKN
DDLLDIASTAASGEAEEEVDVSLAPPVMTVTVSSSSMLQLTLTKTCLEMLTNLGKAFGEA
MADPNTTIKDDVVVPACTVINRTGLAIVLKAGNYYALPDSATDGKCSLKHNDEVGLTLAK
AAMGTIRQKSILKSAETNLQREITIQVEGYQEVANIAVFRAGKVLYNLTPSKKTHSATVI
SVVLDIEAQLDSRTVVIRSPLQFHNHFETDVEIYTRVSNWTEKLGVVKGSEKFVVPLNVA
HNDQLLIKPLDKSGEVEYSLCDASVMWQKLWEQLQKKESSVTFRCPCKTEGHTPSFINIV
TEPDIMRFVYGNSLTAPKFTLHLYPVVILRNLMPIPISYTLAGSGGEVKVEPTQQTQLSN
VDMGKTMIMIALLGYSDTDWRGEITLRPGLKEFFQLGFRGGATNERWLELGVLADYSGGY
LEMTLFSPYWLINKTGLPLAYKAGNDIIDHPADKTEPILFSYPTQKGFSPGKNKISLKVG
DSHWSDKFSLDAVGSSGFIGCKNDNKAREKPLQGQEASVDKHKKYSVGVQIQLSNFGMTK
IVVLNPRYLIVNQTDFTIRCSEVGGELLEIPPKECVAFWPTDKKANPKMVVLTEDSKEPS
LPFLFTDPHTTVLKLDSQQVKDVKVGGIIVETSVTETATVVSFDSFSKGNFTVQLINHTD
NMPVKYHQAHVKEERSLEPGEAILYTWQDPTQLRQLVWSAGEKEQRNDLIKDGIGEFRFD
GHPVYWVSFLDGTQRMLCFTDDLAVATNAQQAAELEQSDLELILSLPGLGLSLVNNLTRT
EVAYIGIISSGIIWQNKVRRRWRDLNGKQMKLLEDGYQKAQVDLSDKDAPPKVTKLERDF
EVDFRSMSMLTPQRRSIRRTYHAGVWAQIRTAKHQLQIHLMVHRIQIDNQMPAAIFPTVL
APIPPPKSVSAESAPKPMIEFSLMMRYSEHSKVNQIKYLRLLIQEMAAKVDIGFIINLAG
LFASGAEATGMELKWMEDDLKVCTTTYKESEAVKVALAGDVNFFDNFHLSPLKTHVSFSL
SDTGGEDSDLSKVPQKASVQQNAVRLILQSVGVTLTNVDDVVFKLGFFEREHQFYSQQQI
TSEIIYHYTNQAIKQLYVLVLGLDVIGNPFGFVRGVQTGVVDFFYEPYQGIVQGPEEFAE
GVALGMRSLFGHAVGGAAGAVSRITGTLGKGLAALTMDEEYKRKRQQAINQKPATFQEGL
ARGGKGLVMGFVDGVTGVVKNPFQGAKKEGAKGFFKGVGKGLAGVVAKPTGGVIDFASST
FEGIRRVTDMSEDIARLRLPRFLHLDGIVRPYEKYEAEGLNLFHLIDKGKYALTEDYVAH
MMLTADKKHYLVATDRRLILSSKGEVLGHWNVDFQYPYKDLKEAPTLTEKGLQIMSKEDA
EKGKKKGFGLGLLKGKSGHGKMVQVTNRKEAELFVAKATEAMAKALKLTE
NT seq
9873 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgaatcgcttgttgtggacttgctgaaccgttttctgggccaatatattgag
aatcttgatgcatcgcagttgaaacttggcatttggggaggagatgctgttcttcaaaat
ttggatgtgaaggaaggagctctgaatgatctggacttaccggtcaaaatcaagtctggt
catctgggtaaactgaccctcaagatcccatggaagaacctgtactcagccccagtggaa
gcgaccatcgagggtctctatgtcttggttgtaccaaatgcagatatcaagtacgatgca
gagaaggattcccagcagaagtttgaggccaaacaacggaccctgcagatggtggaggac
actaaacagaaagagaaggagagagaggaaggcgcagagaaagatgccaaggctgactcg
tttgtggagaagatggccagtcaggtgataaagaatctacaagtcaaggtatccgacatc
catatgcgctatgaagacaagacaactaatccgaatgctccattctctattggaactaca
cttcataacgtctcactcaagaccacagataccaactggaaggagtgcttggcggatgca
gcaactaaactcatttacaagatgctgcgtctggactgtctctctgtatactggaacagc
aactcagagttgtactcggacctacccaggccccagcaacaggcaaagatgcgagaaacc
atcacatcagatcctacgaaaacacccaagaactaccagttcttggttgaaccgatctct
ctgaaggcccagctgaaactgaacaccaagcctgagaatgatatggctaaccctaaagcc
tggctcaatttagtcatcgatagtattggcctggccgttagacagaagcagttccgtgat
gtgatgaagatgcttgattcatttgagaggatgtcacgtaacgagccattcaggaagtat
agaccaacctgccctactaaaggcaacgctaagatctggtggcactacgcccagaagtgc
atcttagaggagacggtgagacgaagacacaagatgtggtcttggactcacatcaaagag
caccggagaatgtgcagagaatatcagaagcagtatgtgacaaagcttgacaccagtaaa
cctggcaaagacctgactgctcaactagagtctttagagaaggaactgagtgtgatgaac
atcaccatgtgccgacagcgtgctgaggtggagttccatcgcctgggcaagaaacgagcc
aaggagaaggctgagaagggatggttcggaggatggcttggtggaggcaaaaaaaaagat
gagaaaaaggaagcaggagacctcagcgacatagcaggtcgtttccaagaagcaatgtca
gaggaagagaaagctaagatgtacagtgctatcggctacagcgacaagagcgtggaccca
acattccctaaagattatgtggggatccaggcccacatgaatctgaagagcacgaccgtc
aaacttcttgatgaagagcgccctctccctcagcttcttaatctatccgttactgatctg
actgctgatttcaaacagagaccatctgcagaggccatcaagttggatttgaaattggat
gacttcagtgtgtttggcacccccttggaacaaggcaagatccctcaattggtggagtca
cagaaccttgaagcagacaagcaatatgcgttagtcagcctgttggtggaggttaaccca
tcggatggcaaggctgatcagaggattaggttgaatactagacccatcaagattgcttat
gatgctaataccatcaaccagattgccaagttctttgagccgcccaaggatatccatctg
gatgatttatcctcggcagcggtatcgtcccttggtgagttcacagtgcagtcgtccacc
ggcatgcagtatctggttgataataagagcatcttagatgtctgtatcgatctcaaacca
tcttatatcatcataccagagaatggagtcaatgatgggactggtagtgccttgatagtt
gatcttggtaatctcaagttgaacacggtgaacgaggaaagacatgaagaacctagacga
gagaatgaatctttggatgatttaatgaagaaggcttatgatgtgttcaacattgagctt
caatcagtacaggttatcctggcagctgcaggtgatgactggggtgaagccaggaagctt
ggagggtcacctcttcatctattgcagccactggatctcaaggttggacttcataaatgc
tttgtggaagactctagactcgcccagattaagataacaggagagctgcccgatgtgact
gtggacgtgtccgactacaaacttcaagagcttctgaaactggctctgagtattccgatc
cccgagtcaagcaaagaacctgaggagaagttctcaagggacaagctgtttgtatcctcc
gatcagtccctgggtgtagccatcgatggctctctatctgtagtaagtcttgaacaacca
aatgatagctccgactctgacgagtatttttcagccagcgagatctattttgaccagaga
gatccactcttgccggcagacaaacccatcacggctcctgtcgggaaggaggttgtcaag
gctggggaggagagtcttgcagacacacaacgaaccagccttgagctccagtttgaactc
aagaaggtgggtctaaacttgtcccagcgatgctctggtgaagagaaacctcttatatct
gttgctatccaagctctgggtactcaagtccgtatgagaccatgggatatgagtgctact
gtatccctgggtagcgtgtctgttcaacataggcagttcaaagctttggatggtggtgac
ctgttcttggttcggacaccagcttatgagaaagggacagacagacttttgtcaatcaac
taccaaaaggcagagaagaagagcccagagtttgccaccacctaccagtcaacagagcaa
gacatcaccgtcaagttcaccaccctagagattgtagcccactccgatgccattctcaat
ttaacagactttgcagacacccttgtagctagtctagacaccgggaagggggcagcgagt
ggggcagagcctgaagatgaggggtacctcagtgaagacgagaagaaaccaaaaggcaag
agagtaaagagattgaagccaagtgacaccattgacgtcaaattgacagccaatctagac
gtcatctccctggtcgtgtgtactaaagacaccagcctgactgaagttaacatcaaaggg
ctgaaagctggagttttacttcagaagcatgtaacaacagtaacagccctccttcaggat
atcacagtgacagacccaacaccaggggctttataccccaagattgtctccttcgtcgac
gatgaggtgtttaaggtgaaagctgaattattcaacggcgccactgcagcggatggatac
tctgatatgagtgctgtagacattcgagttggtttgagcatgggacgtatgagggccatc
ttcctgaacaagttcgttatgagactcctgtcctttgtggaccagttctcacgtgccaaa
gcagcagcagctgaagccagcgcaaacgccgccttagccgctaagaagactgcagagaac
atgcaggaacgctgcatccgcatcgctctcgatgtcgtcatcaaggctccactgatcatc
atccctaagagttcaacctcagacatggctctggtggctgatcttggtcagctactggtg
cagaattccttcagtatggcagctggaactgagagtatggagttaccggctgtattggag
gcaatgcaggtggctctacagtctatccagctatcaagagccgtcttgcaaggtggtcgt
atcaagtctgaagtattgatgttagaaccaatgggcttgaatattgacctagtccgtaat
ctagctgctagctggtaccacaagacacctgctattgcactgtcgggcaaactgcaaccc
atcaggttttctattggtcctgatgactttgccctggttatgggtattctcaataagaac
ttagcagagggtcaactggaagtggctgaggcagaaagtccttctgcatcgggtggagag
gtgccgcctgctgagggaggggcggctgctgcatctgatgtcaagtctgcagccaaggag
gagacaaaagccgatgtccctgcgtcggagacaactgaagagccatgggagcaaatctgt
gtagactttgagttggagggcatctacacttccttgtacactggcaagctagacctgcgt
cctttggagggtcgtcaggagaggataccccatgaagccctaggctgctttgcagtctgt
cagcttggagttaaagcaagcatacaatccaacctggctataacggctaatgcaaaacta
gccaagattctccttgatgacatacgtccagggagaggcgatgccattacaaggatgctt
ggttcccatggtgatgatcaggatcttgaaacaatcactgtgaagtttgagcagatggcc
aaccaggacaagaatattgaagcgtcagtcagaaacttccacgcttgtgtttgcgccgag
ttcctgatgactgtagccgaaatcttcaccaagggcctcgaagagagtgctgtgcccaaa
ccagaggataaagacaagaagcctgtcaagaaagcaatgcagacgcctaataacacccct
gcgggtacccctgacgcccaggaaagtacccaacaaggtgtcattacggtgaaagcaatc
ctggacagcccggagatcgtcctggtctcggattcttctaagaaggataccaacgccttg
gtcctcaaaactatgggagaggtgaaccttacgatgtccgacaatgcaatgtacatcaag
ggaggtttacaacaacttcgtatcaatgcttgcccttatctagaacagcatcgtatcggc
aagatgaccaaggtattggtgccatgtaacgttgacttcaacctgaacgcaccaaatgct
aaaggtcagcatatcagcctaatgattgaggagattgcgctcaacatcagtccagaagtc
atcaagatcctcagctctgtcagccagacgctaactccaacaaagcctgagaccgacgag
gagaaacgaagcaaagctatcgttcctgtggatctctgggatgctaagaaggtgtctgaa
cataacttctggttcttcaaggaggaagagggtatagacgtgaacactcttcttgaagag
gcggttgtggttgccgtggagcagtctcgaggtgaagagttagtagcgacaattaagagt
gttatcatcaaactagaggccagcgtagggaggcgtactgttcctatgctgactgtggat
gctagcgtagaggctgtcgtcaaagactggtcaaccaagcttcatgttgaaacccacatg
acaacagagattgcttgttacaatgagaaggtgtctgcttgggagccactgttggagccg
ctggaagcagaagccggtcaacataaaccatgggatcttagtctggatattgtgaagaat
gatgacctgcttgacatcgcatctacagcagcctcaggtgaggcagaagaggaggtggat
gtatccctggctcctcctgtgatgacggtcaccgtctcatcaagcagtatgctacagttg
acactcactaagacgtgcctagagatgcttacaaaccttgggaaggcatttggtgaagca
atggccgatccgaacacaaccattaaagatgatgtggtggttccagcatgtaccgtcatc
aaccgcactggcctggcaatcgtgttgaaagcaggaaactactacgcgctacctgacagc
gccacagatgggaaatgcagcctgaaacacaatgatgaagtcggcctgactctagccaaa
gcagctatgggaacaatcagacagaagtccattctgaaatcagcggaaacaaacttgcaa
cgtgagattaccatccaggttgaaggttaccaagaggttgccaacattgcggtattcaga
gctggtaaagtcttgtacaatctaacaccatctaagaagacacactcggcaacagtcatc
tcagtggtgctagatatagaggctcagctggactccaggactgtggttatacgctcacca
cttcaattccacaaccatttcgagacggacgtcgagatctacacccgagtctcaaactgg
accgagaaactgggtgtggtcaagggatctgagaagtttgtcgttcctctcaatgtggct
cacaatgaccagctgttgatcaagcccctggacaagagcggagaagtagagtacagcctg
tgtgatgcctctgtgatgtggcagaaattatgggaacaacttcagaagaaagagagcagt
gtaacattcaggtgcccctgtaagactgagggtcacacaccgtcttttatcaatatcgta
acggagccagacatcatgcggtttgtttatggaaactcactgaccgctcccaagtttact
ctacatctctacccagtggtcatcctacggaacctcatgccaatacccatctcatacacc
ctggcgggttccggaggtgaagtcaaggtagagcccacccagcagactcaactgtccaat
gtagatatgggcaagacaatgatcatgatagcgcttcttggttactcggacaccgattgg
agaggagagatcaccctccggccaggcctgaaggagtttttccagcttgggttccgagga
ggagctaccaacgagcgttggttagagctgggtgtcttagccgattacagtggtggctat
ctggagatgacgctgttctcaccatactggcttattaataagactggactaccattggct
tacaaggctggaaacgacatcatcgatcacccagccgacaagacggagcctattttgttc
tcgtatccaacacaaaaaggattcagccctggcaagaacaagatttctctcaaggttggc
gattcacactggtcggataaattctccctggatgcagtgggaagctcaggtttcatcggc
tgcaagaatgacaacaaagcaagagagaaaccattacagggccaggaagcttcagttgat
aagcacaagaaatacagcgtcggtgtccagattcagctgagcaatttcggcatgactaag
atcgttgtgttgaatccacgatacctgattgtaaaccagacagacttcaccatcagatgc
tcagaagttggcggagagttgttggagatcccaccaaaggagtgtgttgcattctggcca
actgataagaaggccaaccccaagatggtcgtcctgacggaagattccaaagagccttct
cttccgttcctcttcactgaccctcacactacggtcctcaagctggactcacagcaagta
aaagatgtgaaggtgggtggtatcatcgtggagacatccgtcacagagacagcgactgta
gtgagttttgactccttcagtaagggcaacttcactgtacagttgataaaccacacagac
aatatgccagtcaaataccaccaggctcatgtgaaagaggaacgatcactggaaccagga
gaagctatcctctacacttggcaggacccaacacagttacgacaactggtgtggagcgct
ggggaaaaagaacagaggaatgatctcatcaaggatggtatcggagagttcagatttgac
ggtcatccagtctactgggtgtcattcttggatggaactcagaggatgctttgcttcact
gatgacctggctgtagctaccaacgcacaacaggcagctgagttggaacagtcggatcta
gaactgatcttatctctaccaggacttggtctctctcttgtcaataacctgactagaact
gaagtggcttacattggcattatcagctctggaatcatctggcagaacaaggtccgtcgt
cgatggcgtgatctaaatgggaagcagatgaaacttcttgaggatgggtaccagaaggct
caggtggacctctctgataaagatgctccgccaaaagtcaccaagctggagagagatttt
gaggttgacttccgttcgatgagcatgttgacaccccagcgtcgttccatccggcgtacc
tatcacgctggtgtatgggcgcagatacgcacagcgaaacaccagctgcagattcatctg
atggttcataggatccagattgataaccaaatgcctgcggctatcttcccaacggtacta
gctccgatacctccccctaagagtgtgtctgcagagagtgctcccaagccaatgatcgag
ttcagcttaatgatgagatattctgaacacagtaaagtcaatcagattaaatatctacgc
cttctgattcaagaaatggccgctaaggtggatatcggatttatcatcaatctggcggga
ctctttgcttctggggctgaagctactggcatggagttgaagtggatggaagatgacttg
aaggtatgtaccaccacctacaaggagagtgaagcagttaaagtagctctagctggagac
gttaacttctttgataacttccatctctcacccctcaagactcatgtaagcttctctctg
tccgacaccggtggtgaagatagtgatttgagtaaagtcccgcagaaggcatcagtgcaa
cagaacgctgtcagattgatcctacagagtgttggggtcactcttaccaacgttgatgac
gtcgtcttcaagcttggcttctttgagcgagagcatcaattctattcacagcaacagatc
acatctgagattatttatcactacaccaatcaggccattaagcagctgtatgtactggta
ctcggtttggatgtcatcggtaacccattcggctttgtgcgtggtgtgcagactggcgtg
gtagatttcttctacgagccgtaccaggggattgtccaaggaccagaggagtttgctgaa
ggtgttgccctgggcatgaggagcttgtttggacatgcagtcggtggagcagcaggcgct
gtgtctcgtatcaccggtaccctaggaaaaggactagcagctctgacaatggatgaagag
tacaagaggaagaggcaacaagcaatcaatcagaaaccagcaaccttccaagaaggtcta
gcaaggggtggaaagggactcgttatgggttttgtggatggagtaacaggcgtggtgaag
aatcccttccaaggagccaagaaagaaggtgccaagggtttctttaagggtgtggggaag
gggctcgctggtgtcgttgctaaacctactggtggtgtcattgactttgctagcagtacg
tttgaaggcattcgcagggtgacagacatgagtgaggacatagctcgtctacgtcttcct
cgattcctccatcttgatggcatcgtcagaccctatgagaagtacgaagctgaaggcttg
aatctattccatcttatcgacaagggcaagtacgccctgacggaggactatgtcgctcat
atgatgctcacggcagataagaaacattatctggtagccaccgacaggcgtctcatccta
tccagcaagggagaggtgttgggtcattggaacgttgacttccagtatccctacaaagac
cttaaagaagcaccaactctgactgagaagggtctacaaatcatgtctaaggaggacgct
gagaaagggaagaagaaagggtttggtcttggtcttctgaaagggaagtcaggacatggc
aagatggtccaggtcaccaacaggaaagaagctgagctatttgttgccaaggcaaccgag
gccatggcaaaggcactgaaactcacagagtga
DBGET
integrated database retrieval system
