Asterias amurensis (Northern Pacific seastar): 139936979
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Entry
139936979 CDS
T10870
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04145
Phagosome
aamu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139936979
09142 Cell motility
04814 Motor proteins
139936979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamu03036
]
139936979
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamu04812
]
139936979
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
139936979
Cytoskeleton proteins [BR:
aamu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
139936979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Dynein_IC2
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_SPT8
Nbas_N
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Beta-prop_DCAF4
Beta-prop_BBS7
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
139936979
NCBI-ProteinID:
XP_071787977
LinkDB
All DBs
Position
5:complement(8617700..8648430)
Genome browser
AA seq
609 aa
AA seq
DB search
MSDRKAELERKKLRLQQIREEKKRKEEEKKKREATDATKAVEAGGGGQDKNLERRRQDAD
ALLQELGLPQPGLAPPSPSKSSVSETGSQDSTPDGAPYIPSASPRHKPKLGLSKPTIMGF
PPKELVTYAKETQTPTETSDKSDQSDSEDDEEMPPEPAPVAPVPEVAPVEEEKEEEPKVI
ELTEEEKEQFLSSEEFLSLFSHSTKLVERALTEDKGIFMDYRGKGDEDGDGDKDAGAKLS
LNCQFFDERWSRHRTVTSLDWSTQFPELVVASYNNNEESPHEPDGVALVWNNKFKKTSPE
FVFHFQSAVMSASFARFHPNLVIGGTYSGQIVLWDNRSNKRTPVQRSPLSAAAHTHPVYC
VNVVGTQNAHNLISVSTDGKMCSWSLDMLSQPQDSMELHYKQSKSVAVMSMTFPSNDVNN
FVVGSEDGSVYTACRHGSKAGINESYEAHQGPVTGIDCHHVQGQLDFSHLFLSSSFDWTM
KLWSLKQSKPLYSFEDNSDYVYDVQWSPVHPALFAAVDGMGKLDLWNLNNETEVPTASVT
LDGQPAANRVRWSHNGQQIAAGDAEGRVFIYDVGESLATPRHDEWSRFVRTLADIKAVTA
DADDDDVSR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccgaaaggctgagcttgagcgcaagaagcttcgtcttcaacaaatcagagaa
gagaaaaaacgcaaagaggaagaaaagaaaaaacgagaggctactgatgcgactaaggct
gttgaagcaggcggtggtggacaagacaagaatcttgagaggagacgacaagatgcagat
gccctactccaagagctaggcttgccacaaccaggcttagcaccaccctctccttcaaag
tcatctgtaagtgaaacagggagtcaggattctacaccagatggtgctccttatatacca
agtgccagtccaaggcataagcccaaactgggtttatcaaagcctactatcatgggattt
ccacccaaggaactggtgacctacgctaaggagacacagactccgacagagactagtgac
aaatcagaccaatcggacagcgaagatgatgaagagatgcctcctgaaccggctccagtt
gcaccggtccctgaagttgctccagttgaagaagaaaaggaagaagaacccaaagtgatt
gagttgacagaggaagagaaggagcagttcttatcatcagaggagttcttgagtctgttc
agtcacagcactaagcttgtagagagggctctgactgaggataaaggaatcttcatggac
tacaggggcaaaggagacgaggatggagatggagataaggatgctggggccaagctttcg
ttgaactgccagttctttgatgagcgctggtctcgtcatcgcactgtgacctccctagac
tggtcaacccagtttccggagcttgttgtggcctcttataacaacaatgaggaatctcca
catgagcctgatggagtcgctttggtctggaacaataaattcaaaaagacttcccctgag
tttgtcttccatttccagtctgcagtgatgtccgcatcctttgctcgtttccatcctaac
ctcgtgataggaggcacctactctggccagattgtgctgtgggataaccgcagtaacaag
aggacaccagtgcagcgctctccactatctgcagcagctcatacgcaccctgtgtactgt
gtgaatgtagtaggaacccagaatgctcacaatttgataagcgtatcaactgatggcaag
atgtgctcatggagtctagacatgctgtcccagccacaggacagtatggagcttcattac
aagcaatccaagtcggtagccgtgatgtctatgaccttccccagcaatgatgtcaataac
tttgtggtcggtagtgaagacggatctgtgtacactgcatgcagacacggcagcaaagct
ggtatcaatgagtcgtacgaggcacaccagggaccagtcactggtattgattgtcatcat
gtacagggacagctagatttctctcatctcttcctatcatcatcgtttgattggaccatg
aaactatggagtctcaaacaatctaaacctctatactcatttgaggacaacagtgattat
gtttacgatgtgcaatggtcaccggttcacccagctttgttcgctgcggtggatgggatg
ggaaaactggacctgtggaatcttaacaatgaaacagaggttcctactgctagtgtgacc
cttgatggtcagccagcagccaaccgagtccgatggtctcacaacggtcagcagatagca
gctggcgatgcagagggtagagtctttatctatgatgtaggagagagtcttgccactcca
aggcacgatgaatggtctcgttttgtccgtacgttagccgacatcaaagcagtcacagca
gatgctgatgatgacgacgtatccagatag
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