Asterias amurensis (Northern Pacific seastar): 139937166
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Entry
139937166 CDS
T10870
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139937166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139937166
Spliceosome [BR:
aamu03041
]
Common components
Common spliceosomal components
SR proteins
139937166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DbpA
SET_assoc
Motif
Other DBs
NCBI-GeneID:
139937166
NCBI-ProteinID:
XP_071788315
LinkDB
All DBs
Position
1:complement(32593632..32603539)
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AA seq
310 aa
AA seq
DB search
MSRVYIGRLSYQAREKDIERFFKNYGHIREINLKNGFGFVEFDDRRDAEDAVYDLNNREL
CGERVIIEHARGPARGRDDRYGGSNDRGGRDRGGSDRRPGWIDNHNGSASYSGRSSRYGP
PVRTDFRVIVDNLSSRVSWQDLKDYMRQAGEVTFADAHKQRKNEGIVEFNNLNDMNNAIK
KLNGTELSGRHIKIMEDTPRKKRSYTRSRSRSRSRSRSPRRSRSRSPRHSRSRRSRSGSR
SRSRSRSRDRKSNSKSRSRSKSARRSQSKSPRCSVSPRKSKSRSRSRSRSPRSRSRSRSH
SKSRSHSPCD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagtatatattggccgtctgagctatcaggcgagggaaaaagacattgaaaga
tttttcaagaactacggccacatcagagagatcaatctcaagaatggtttcggctttgtg
gaatttgacgatcgcagagatgctgaggatgcagtttatgacttgaataatagagaactt
tgcggtgaacgggtgattattgagcatgcacgtggaccagccagaggaagagatgatcgc
tacggaggttctaatgatagagggggtagggatagaggtggcagtgacagaagaccaggc
tggatcgacaatcataacggctcagcgtcttattctggtcgatcttctagatacggtcca
cctgtacgcactgatttccgtgtcatcgttgataatctctccagtcgtgtcagttggcag
gatctgaaagattacatgcgtcaggctggtgaagtgacctttgcagatgcccacaaacag
cgcaaaaatgaaggcattgtcgaatttaacaacttgaacgacatgaataatgctatcaaa
aagctaaacggaaccgagttgagtggaagacacatcaagataatggaagatactccacgg
aagaagagaagttatactcgtagtcgctctcgatctagatctcgttcccgctcacctcgt
cgatctcgttctcgctcaccccgtcattctcgctccagacgctcacgatctggaagccgc
tccagaagcagatctcgctcaagggaccgcaagagcaacagcaagagtcgtagccgaagc
aagagtgcaagacgtagccagtctaagtcaccaaggtgtagtgtctcaccgcgcaaatca
aaatccagatctagatccagatcccgttccccacgatcccgttctcgatcccgttcccac
tcaaagtcaagatcacacagcccctgcgactaa
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