Asterias amurensis (Northern Pacific seastar): 139937470
Help
Entry
139937470 CDS
T10870
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04140
Autophagy - animal
aamu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139937470
04148 Efferocytosis
139937470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139937470
Membrane trafficking [BR:
aamu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139937470
Hops complex
139937470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
TraF_2
Beta-prop_WDR19_1st
TFIIA_gamma_N
Motif
Other DBs
NCBI-GeneID:
139937470
NCBI-ProteinID:
XP_071788720
LinkDB
All DBs
Position
5:2932345..2955072
Genome browser
AA seq
835 aa
AA seq
DB search
MAHITGDWNPLGEVFYRKLELYSMDRSWQEVADLKKFKVAAAPYGGPIALVRDDSKAGVR
GSTRPTVYIYTSSGREISQFRWDSGQLLQMGWSSREDLLCVQEDGTVLVYDIFGTFQRNF
SLGQEARDTKVLECKIFQGFVGTGLAILTGSYRFFVINNIDDPHSRKMVEVPGLDCPPSS
WSIICRDRHTQILLAKERQLFLLDYTDVHEQMLETRSNINSFIEMAVSFDNRLLALFADT
GLLWIGSSDLQKCYCEFDTKSQMRPKQLAWCGTGAVVGYWENLLLVIGPHKDWIKFNMDS
DAYLVPEADGVRIVDTHTHELLQRVPVVVEEIFKIGSMAPGAMLFEASKEFQKESQKADE
YIRMVKDQLSLAVDQTIEAAGCEYEPATQRMLLRAASFGKCFLTNLNPEKFVNMCKLLRV
LNSVREYHVGVPLSYEQLKRLTLPVLIDRLILRRQWCLAMHISRFLKLPEADGESRILAH
WACYKVLQKHIADERIAQDIKSKLDTTPGIAYSEIAKKASECGRTQLAVRLLEYEPRAAE
QVPLLMTMRDQKVALIKAIESGDTDLVYMVLLQMKETMPMGDFLMSLRNHPMAQSLFMQF
CREQNPALLSDLHYQNDDFQEMGNCQVAESFQTSDMRQKLDKLNQAQDSYTKARNELAAK
AAEEQAKLLGYQQKLEEQYKVTYIGKTLHDTMHELISKNMSKLAEQLRKEFKVPDKRFWW
MKVDALASAGDWLELERFAKSKKSPIGYEPFVEVCMKHANKYEANKYIGRVTAEHKVKMY
IRMGSLEEAADLAFQQRNEEDLNLVLRQSIGNRTLSAKIQSMKAQLVAKRDYPNP
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacattactggtgattggaaccccttaggggaggtgttttaccggaagttggag
ctgtacagtatggatcgaagctggcaagaggtcgctgaccttaagaagttcaaggtggct
gccgccccctacggaggacccatcgcacttgttcgtgatgacagtaaggcaggagtccga
ggttccacccgcccaactgtctacatctacacatcatctggaagagaaatctcacagttt
cggtgggatagtggccagttgttgcaaatgggatggtcaagtagagaagatcttctctgc
gtacaagaggacggtaccgtcttagtgtacgacatcttcggaactttccagagaaacttc
agtcttggtcaggaggcacgtgacaccaaggtcttagagtgcaagatcttccagggattc
gtgggtacaggtcttgccatcctgactggaagctaccgattctttgtcatcaataacatt
gacgaccctcacagccgtaagatggtcgaagtgccaggtctagactgtcctcccagtagt
tggtccatcatctgccgagacagacatactcagattcttcttgccaaagaaagacaatta
ttcctcctggactacacagatgtacatgaacagatgctagaaacaagaagtaacatcaac
tctttcattgagatggccgtctcgtttgataaccgtctcctagctctctttgctgacact
ggacttctgtggattggttcctctgatcttcagaaatgttactgtgagtttgacacaaag
agtcagatgagacccaagcagttagcgtggtgcggcaccggagcggtggtcggctactgg
gagaacctccttctggtcatcggtcctcacaaagactggatcaaattcaacatggacagt
gatgcctacctagtaccagaagcagatggagtacgtatcgttgacactcacactcacgag
ttactgcaacgagtaccagttgttgtggaggagatttttaagattggttccatggcaccc
ggtgcgatgctctttgaggcatcgaaggagtttcagaaagaaagtcagaaagctgatgag
tatatccggatggtgaaggaccagctctcattggccgttgatcagaccattgaagcagcg
gggtgtgagtacgaacccgcaacgcaacgaatgcttcttagggctgcttccttcggcaag
tgtttcttgaccaacttgaatccagagaagtttgtcaatatgtgtaaattactgagagtt
ctcaactctgtgagggagtatcacgttggagttccactcagctatgaacaactcaaacgg
ttgactctaccagtgttaatcgacaggttgatcctgcgtcgtcagtggtgtctcgccatg
cacatcagtcgcttcttgaaactacctgaggctgatggagagagtagaatactcgcacac
tgggcttgctacaaggtattgcagaagcacatagcggatgaaaggatagcccaagatata
aagagtaagcttgacaccacgccagggattgcttattctgagattgctaagaaggcatcg
gaatgtgggcgtacccaacttgccgtcaggcttctggaatatgagcctcgagcagctgaa
caagtccctctgttgatgacgatgagagaccaaaaagttgctcttattaaagcaatagag
agtggtgatactgacttggtgtacatggttctactccagatgaaagagacgatgccaatg
ggtgatttcctcatgtcactcagaaaccatccaatggcacagagcctctttatgcagttt
tgtcgagaacagaacccagcccttttgtcagatcttcactatcaaaatgatgacttccag
gagatgggaaattgtcaagtcgcagaaagtttccagacttcagacatgaggcagaagtta
gacaaactcaaccaagctcaagacagttacaccaaggcaaggaatgaactagcagcaaag
gcagctgaagagcaagctaaacttcttggttatcaacagaagttagaggagcagtataaa
gtgacgtatataggcaagacgttacatgacaccatgcatgaactgatctctaagaatatg
agcaagttagccgagcaactcagaaaagaattcaaggttccagacaagaggttctggtgg
atgaaggttgatgctttagccagcgctggtgattggttagaattagagagatttgcaaag
agtaagaagtcaccaatcggatatgagccgtttgttgaagtctgtatgaagcacgccaat
aagtacgaggccaataagtatatcgggagagtcactgcagaacacaaagtcaagatgtac
atccgtatgggatcgcttgaagaagctgctgatttagcgttccagcaacgcaacgaggaa
gacttgaacctggtactacgtcagagcattggtaaccgaactctaagcgctaagatccaa
agcatgaaggcacagttggtcgctaagagagattacccgaatccataa
DBGET
integrated database retrieval system
