Asterias amurensis (Northern Pacific seastar): 139938567
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Entry
139938567 CDS
T10870
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03030
DNA replication
aamu03410
Base excision repair
aamu03420
Nucleotide excision repair
aamu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139938567
03410 Base excision repair
139938567
03420 Nucleotide excision repair
139938567
03430 Mismatch repair
139938567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamu03032
]
139938567
03036 Chromosome and associated proteins [BR:
aamu03036
]
139938567
03400 DNA repair and recombination proteins [BR:
aamu03400
]
139938567
DNA replication proteins [BR:
aamu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139938567
DNA Replication Termination Factors
ELG1-RFC complex
139938567
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139938567
DNA repair and recombination proteins [BR:
aamu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139938567
Check point factors
HRAD17(Rad24)-RFC complex
139938567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_11
AAA_16
AAA_22
Rad17
Viral_helicase1
AAA_14
AAA_24
Mg_chelatase
RCF1-5-like_lid
nSTAND3
AAA_19
AAA_assoc_2
ABC_tran
AAA_5
RuvB_N
AAA_23
Gp44_lid
AAA_25
SLFN-g3_helicase
AAA_30
NTPase_1
MeaB
PPR_long
MipZ
AAA_28
cobW
RNA_helicase
AAA_7
FtsK_SpoIIIE
AAA_18
CbiA
bpMoxR
PPR_1
Motif
Other DBs
NCBI-GeneID:
139938567
NCBI-ProteinID:
XP_071790245
LinkDB
All DBs
Position
6:23038473..23046204
Genome browser
AA seq
348 aa
AA seq
DB search
MSSKNPEIMEVDESTSAAAKPGKSTKYELPWVEKYRPTLLSDVVGNEETISRLEVFSKEG
NVPNVIIAGPPGTGKTTSILCLCRALLGPDYKEAVLEMNASNDRGIDVVRNKIKTFAQKK
VTLPKGRHKVIILDEADSMTSGAQQAMRRTMEIYSKTTRFALACNTSDKIIEPIQSRCAV
LRYSRLTDKQLLHRLIEVGEKEGIECTDDGLEAIIYTAQGDMRQAINNMQSTHSGFGLVN
SENVFKVCDEPHPILIKDMFTKCVEGNIDKAYEVMEHMWSMGYAPEDIISNMFRVCKTFD
MAEYLKLEFIKEIGFTHMKIAEGVGSLLQLSGLLARMCQKGMLPPEES
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaagaatccagaaataatggaggtagacgagtccacaagtgcagcagcaaaa
ccaggcaaatctaccaagtacgagctcccatgggtggagaagtacagaccaacccttttg
agtgatgtcgttggtaatgaagagacgatcagtcgactggaagttttctccaaagaggga
aatgtacctaacgtcatcatagctggtccccctggaactggcaaaaccaccagtatattg
tgtctttgccgagccttgctaggcccagactacaaggaagctgttctagaaatgaatgcc
tcaaatgacaggggaatcgacgtagtcagaaacaagataaagacatttgctcagaagaag
gttacgttgcctaaagggcgtcataaggtcatcattctggatgaagcagatagtatgaca
agtggagcccagcaggctatgcgtcgaaccatggaaatctactccaagacaacacggttt
gctctcgcctgtaacacatccgacaagatcattgagccgattcaatcacggtgtgcagtc
ttgaggtactcccgcctgacggacaaacagctcctccaccggctgattgaggttggagag
aaggaaggaatagaatgcacggatgatggactggaggcaatcatctatacagcacagggg
gacatgagacaggctataaataatatgcagtcaacacattctggttttggtcttgtgaac
agcgaaaacgtcttcaaagtttgtgatgagccccatcctatccttattaaggatatgttt
actaaatgtgttgaggggaatattgacaaagcctatgaggtgatggaacatatgtggagt
atggggtacgcccccgaggacatcatctcaaatatgttcagggtttgtaagacgtttgac
atggcagaatatcttaaactggagtttatcaaggaaattgggttcacgcatatgaaaata
gcagagggagtaggttcactgctgcaactcagtggtttgctcgccaggatgtgccagaaa
gggatgttgccccctgaggaatcatga
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