Asterias amurensis (Northern Pacific seastar): 139938795
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Entry
139938795 CDS
T10870
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04142
Lysosome
aamu04144
Endocytosis
aamu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139938795
04142 Lysosome
139938795
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139938795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139938795
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamu04147
]
139938795
Membrane trafficking [BR:
aamu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
139938795
Exosome [BR:
aamu04147
]
Exosomal proteins
Proteins found in most exosomes
139938795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_1
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
139938795
NCBI-ProteinID:
XP_071790528
LinkDB
All DBs
Position
6:complement(7407335..7453482)
Genome browser
AA seq
1674 aa
AA seq
DB search
MAQSLPIRFQEHLQLQNLGINAANIGFSTLTMESDKFICIREKVGDQAQVVIIDLNDSAN
PIRRPISADSAIMNPASKVIALKAGRTLQIFNIEMKSKMKAHNLTEEVHFWKWINVNTIG
MVTDNAVFHWSMEGDSQPSKVFDRHSNLAGCQIINYRTDAKMQWLLLIGISAQQNRVVGA
MQLYSVERKVSQPIEGHAACFSSFKQEGNPEASTIFSFAVRGAAGGKLHIIEAGSPPTGN
QPFSKKAVEVFFPPEAQNDFPVAMQVSPKHDTVYLITKYGYIHLYDLESGTCIYMNRISA
ETIFVTAPHEASSGIIGVNRKGQVLSVSVDEENIVTYITNTLQNPDLALRIAVRNNLSGA
EELFVRKFNTLFSQGNFPESAKVAANAPKGILRTPQTIQRFQQVPTQPGTTSPLLQYFGI
LLDQGMLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAHDPTVALSVYL
RANVPNKVIQCFAETGQFSKIVLYAKKVGYTPDYVFLLRSVMRINPEQGSGFAQMLVQDE
EPLADINQIVDVFMEQNMVQQCTSFLLDALKNNRPSEGHLQTRLLEMNLMSAPQVADAIL
GNQMFTHYDRAHVASLCEKAGLLQRALEHYTDLYDIKRAVVNTHMLNPEWLVNYFGSLSV
EDSLECLKGMLSANIRQNLQICVQVATKYHEQLSTNSLIDIFESFKSYEGLFYFLGSIVN
FSQDADVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLIMVVRGQF
STDELVEEVEKRNRLKLLLPWLETRIHEGSVEPATHNALAKIYIDSNNNPERFLRENQYY
DSRVVGKYCEKRDPHLACVSYERGQCDRELINVCNENSLFKSESRYLVRRRDQELWAEVL
QESNPYRRQLIDQIVQTALTETQDADDISVTVKAFMTADLPNELIELLEKIVLENSVFSD
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAIGSELYEEAFAIFKKFDVNTS
AIQVLIEHICNLDRAYEFAERCNEPSVWSQLAMAQMKSGLVKEAIDSYIKADDPSTYTEV
VDASTASGNWEDLVRYLQMARKKARDSFVETELIFAFAKTKRLADLEEFISGPNHAQIQQ
VGDRCYNEGMYEAAKLLYNNVSNFARLASTLVHLGEYQNAVDSARKANSTRTWKEVCFSC
VDGEEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELIQLLEAALGLERAHMGMFTEL
AILYSKYKPSKMREHLELFWSRVNIPKVLRAAEHAHLWAELVFLYDKYEEFDNAVVTMMA
HPTDAWKEAQFKDIVTKVANIELYYKSIQFYLDYKPMMLNDLLTVLIPRMDHTRAVSLFS
RLDQLPLVKPYLRQVQNHNNKAINDALNGLLIDEEDYQGLRTSIDAFDNFDNIALAQRLE
KHELLEFRRIAAYLYKRNNRWKQAVELCKKDKLYRDAMQYAAESRETETAEELIAWFLDQ
GLHECFSASLFNCYDLLHPDVILELSWRHKIMDFAMPYMVQVMREYLSKVDKLAASEKER
SEESESNKNQPLVYNEPQLMLTAGPGMMMAPPQMPPMGVPGAGMMGAQPGYYGM
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagtttgcccatccgctttcaggagcatttacagctccaaaatctgggcatc
aatgccgccaacatcggcttcagtacgctcaccatggagtcggataaattcatctgtatc
cgcgagaaggttggtgaccaggcccaggtagtcatcatcgacctcaacgactccgctaac
ccaatcagacgtccaatctctgctgactccgccatcatgaatccggctagtaaagttatc
gccctcaaagctggccgcactctccagatcttcaacattgagatgaagagcaagatgaag
gcccacaacttgaccgaggaggtccacttctggaaatggatcaacgtcaacaccatcggc
atggtaacggacaacgctgtgttccactggagcatggagggcgactcgcagccgtccaag
gtgtttgaccgccactccaacctggccggctgtcagatcatcaactacaggacggacgcc
aagatgcaatggttactgcttattggcatctctgctcagcaaaaccgagttgttggagcg
atgcagctgtactcagttgagcgtaaggtcagtcaacccatcgagggtcacgctgcttgc
ttctcatcattcaaacaggaaggcaacccagaggcctctaccatcttctcctttgccgtc
aggggagccgcaggcggcaagcttcacatcatcgaggctggcagccctccgaccggtaac
cagcccttctcaaagaaggccgtggaagttttctttcccccagaggcgcagaacgatttc
ccggtggctatgcaggtgagccccaagcatgacactgtgtacctgatcaccaagtacggc
tacatccacctctacgacctggagagcggcacctgcatctacatgaaccgtatcagcgca
gagaccatcttcgtcaccgcgccccacgaggcctcctccggcatcatcggagtcaaccgc
aaaggacaggtcttgtccgtcagcgttgacgaggagaacatcgtcacttacatcaccaac
accctgcagaacccggatcttgccctgcgtatcgccgtgcgcaacaacctctccggcgct
gaggaactctttgtgcgtaaattcaacaccctcttctctcagggtaactttccggagtcg
gctaaggtggctgctaatgcaccaaagggcatcttgcgtacaccgcagaccatccaacgc
ttccagcaggttcccactcagcccggtaccaccagccctctgctgcagtacttcggcatc
ctcttggatcagggaatgctcaacaagtacgagtcgcttgagctgtgccgaccggtgctt
cagcagggacgtaaacaactcctggagaaatggctcaaggaagataagcttgaatgcagc
gaggagcttggagatctcgtcaaggcccacgacccaaccgttgcgttgtccgtctacctt
agagctaatgttccaaacaaagtgattcaatgctttgcagagactggtcagttcagtaag
attgtcctgtacgccaagaaggtcggctacactccggactacgtcttcctcctgcgcagc
gtgatgcgtatcaatccagagcagggatccggcttcgcccagatgcttgtccaggatgag
gaaccgctggccgatatcaaccagatcgtggacgtcttcatggagcagaacatggtccag
cagtgcacctctttcctcctggacgccctcaagaacaaccgcccgtctgagggtcacctc
cagacccgcctcttggaaatgaatcttatgtcggccccgcaggttgccgacgccatcctt
ggcaaccagatgtttacccactacgatcgggcacacgttgcctcactgtgtgagaaggct
ggactcctgcagagggcccttgagcactacactgacttgtacgacatcaagagagcagtg
gttaatactcacatgttgaacccagagtggttggtcaactacttcggctccctctccgtg
gaggattctctggagtgcctgaagggcatgctgtcagcgaacatccgtcagaatctacag
atctgcgttcaggtggccaccaagtaccatgagcagctctccactaactccctcattgac
atctttgagtccttcaagagctacgagggattgttctacttcctgggctccattgtcaac
ttcagtcaggatgctgatgttcacttcaagtatatccaggctgcctgcaagaccggtcag
atcaaggaggtagagcgtatatgccgtgagagcaactgctacgacccggaccgtgtcaaa
aacttcctgaaggaggccaagctgaccgatcagctgcccctcatcatcgtctgtgaccgc
tttgactttgtccacgaccttgttctgtatttgtaccgtaacaacctgcagaagtacatt
gagatctatgtacagaaggtgaacccttctcgtctcccggtggtcattggtggtctcctt
gatgtggattgctctgaagacgtcatcaagagtctcatcatggtggtcaggggacagttc
tcaactgatgagcttgttgaggaggtcgagaagcgaaacagattgaaactgcttctccca
tggctagagactcgcatccacgagggaagtgtggagccagctacccacaatgcattggcc
aagatctatatcgacagcaacaacaatccagagagattcttaagagagaaccagtactac
gacagccgtgtcgttggtaaatactgcgagaagcgcgacccccacctggcctgcgtgtcc
tacgagcgagggcaatgtgaccgggagttgatcaatgtctgcaacgagaactccctcttc
aagagcgagtcacgttaccttgtgcgtcgtcgggaccaggagctgtgggctgaggttctt
caggagtccaacccctacaggaggcagttgattgaccagattgtgcagacagcattgaca
gagacccaggatgctgatgatatctcagtgacagtaaaagctttcatgacggctgacctg
ccaaatgagctcattgaactgctggagaagattgtgctggaaaattccgttttcagtgat
catagaaaccttcagaatctgttgatcctgacggccatcaaagcggacaggacccgcgta
atggagtacatcaaccgcctggataactacgacgccccggacattgcaaatattgccatc
ggcagcgagctgtacgaggaagcatttgctatattcaagaagtttgacgttaacacttcc
gctattcaggtcttgattgagcatatatgcaacctggaccgtgcgtacgagtttgcagag
cgttgcaatgagccctcagtatggagccagctggccatggcacagatgaagagtggtctt
gtgaaagaggccattgactcgtacatcaaggccgacgacccttcaacttacaccgaggtc
gttgacgcatcaactgcatcaggtaactgggaggacttggtacgctatctgcagatggct
cgtaagaaggccagagattccttcgtggagacggagctcatctttgcattcgcaaagacg
aagcgtctcgccgatctggaagagttcatctctggacccaaccacgctcagatccaacag
gttggtgaccgatgttacaatgaaggcatgtacgaggcggccaagctattgtacaacaat
gtctccaactttgcccgtctggcctccacccttgttcacctcggggagtaccagaacgcc
gtggacagcgccagaaaggccaacagcacacgaacatggaaggaggtctgtttctcatgt
gttgatggtgaggagttccgtctagcccagatgtgtggtcttcacattgtggtccacgct
gacgagttggaagaactcatcaactactaccaagacagaggctactttgaggagttgatt
cagcttcttgaggctgctctaggtctggagcgtgctcacatggggatgttcactgagctg
gcaatcctctactccaagtacaagccctccaagatgcgggaacatctggagctgttctgg
tcgagggtcaacattccaaaggtgttacgagcagccgagcatgctcacctatgggccgag
ttagtgtttctgtacgacaaatatgaggagtttgataacgccgtagtcacgatgatggca
cacccaaccgacgcctggaaggaggcacagttcaaagacatcgttacaaaggttgcaaac
atagagctttactacaagagtatccagttttacttggactataaacccatgatgctgaac
gaccttctgactgtgctcatcccacgtatggaccacacccgagccgttagtctcttctct
aggctcgaccaactaccgctggtcaagccatacctgaggcaggtgcagaaccacaacaac
aaggccatcaatgacgccctcaacggtctcctcatcgacgaggaagattaccagggactc
cgtacctcaatcgacgccttcgacaactttgacaacatcgccctcgcccagcgtctggag
aagcacgagctcctggagttccgacgcatcgccgcttacctgtacaagagaaacaaccgc
tggaaacaggctgtggagttgtgcaaaaaggacaagctttacagggatgccatgcaatac
gccgctgagtcgagggaaacagagaccgccgaggagttgattgcctggttcttggaccaa
ggtctccacgagtgcttcagtgcctctctcttcaactgctacgacctcttgcatccggac
gtcattctagagctgtcttggcgccataagatcatggactttgctatgccgtacatggtg
caggtcatgagggaatacctctcaaaggttgataaactggcagcttcagagaaggagaga
tccgaggagagtgaatcaaataagaaccaacccttggtgtacaatgaaccccagctgatg
ctgacggccggtccaggcatgatgatggcccctccccagatgccccccatgggtgtaccc
ggagcgggtatgatgggggcgcaaccgggctactacggcatgtga
DBGET
integrated database retrieval system
