Asterias amurensis (Northern Pacific seastar): 139938894
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Entry
139938894 CDS
T10870
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139938894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139938894
Membrane trafficking [BR:
aamu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139938894
Protein recycling
Other Rab GTPase associated proteins
139938894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
139938894
NCBI-ProteinID:
XP_071790645
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All DBs
Position
6:complement(19363268..19376114)
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AA seq
492 aa
AA seq
DB search
MSSKKKRGFHMKESELLCKNGCGFYGNVAWQGYCSKCWREVCQKSRQAQIESDALLARKI
ADSERAQSSQPPPVQGAEALAFDKFGEKKKQHSSTRSKAMKTFFGKTAKSPNKETQPQHP
PLEKKHSSESQRAMGDFMEFLKMLNRPAAQDLNKQCRFFVEKVQRSTQLNIEEQSELVQD
FYAAIGERIKTHVAFKGKLARGSSQDQLEGMLDNVEKIIMTRLYRTLFCPPYTDDEQKDL
AIQNRIRRLRWITPAMLDAVIDEGNPRVRELIERAQTDLIEVNSRRAPIDKLACIVRCSQ
NIFKIINLSQEAPASADDYLPAVIYMVLKANPPQLHSNIQYITRFANPSRLMQGEAGYYF
TNVCCAISFVENLDAQSLSLTQEEYDSYMSGKATPPGSQFNQPICNGLKLMYANLASLEE
LRGKQDQLMKNARELQREMTAWRDSVINQVDDVLKNKPLIIKRCKVPAGLDTEISSTSLN
LPAPMMPQVVNQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaaaaagaagcgaggcttccacatgaaggaatcagaactcctctgcaagaat
ggatgcggtttctatgggaacgtggcttggcagggatactgctccaagtgttggagggaa
gtctgtcagaaatctcggcaggctcagattgagagcgatgcgttgctcgctcgcaagatt
gctgacagtgagcgtgctcagtcctcgcaacctcctccagtccagggtgcagaggccctc
gcttttgataagtttggggagaagaagaaacagcattcttccactcgcagcaaagcgatg
aaaaccttctttggcaaaactgcaaaaagtccaaacaaggaaactcaaccccagcaccca
ccccttgagaaaaagcatagctctgagagccagagagccatgggtgactttatggaattc
ctgaagatgctgaaccgccctgctgcccaagacctgaacaagcagtgtcgtttctttgtt
gagaaggtgcaacgctccactcagcttaacattgaggagcagtcggagctagtgcaggac
ttctacgccgccattggagaaagaatcaagacacatgtagcgtttaaaggtaaactcgcc
agaggttcttctcaagaccaacttgaaggtatgttagacaatgtggagaagatcatcatg
acacgtctgtaccggacgcttttctgccccccgtacactgatgacgagcagaaggatcta
gccatccagaatcgcatcaggagactaagatggatcactccggcaatgctggatgcagtc
attgatgaaggcaaccctagagtacgagagctgattgaaagagctcagacagatctcatt
gaggttaattctcgacgagcgccgattgacaaacttgcgtgtatcgttcgctgtagccag
aatattttcaagatcatcaatctgtcccaagaggctccagcgagtgcagatgactacctg
cctgctgttatttacatggtgttaaaggcaaatccacctcagcttcactctaacatacag
tacatcactagattcgctaatccatcccggctaatgcaaggcgaggcaggatactacttc
actaatgtgtgctgtgcaataagttttgtggagaatctggatgctcagtccctgtctctg
acccaagaagaatacgacagttacatgagtggtaaggccaccccaccaggcagtcaattc
aatcagccgatctgcaatggattgaagctcatgtatgccaatctagcatcgctagaagag
ctacgaggtaaacaggatcaactaatgaagaatgccagggagttacaacgggagatgacg
gcttggagggatagtgtgattaaccaggttgacgatgtgttgaagaacaaaccattgatc
atcaaacgttgcaaggtaccagccggactggatacagagatctcaagtacatcactgaac
cttcctgcaccgatgatgccacaagttgtcaaccagtga
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