Asterias amurensis (Northern Pacific seastar): 139939178
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Entry
139939178 CDS
T10870
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04140
Autophagy - animal
aamu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139939178
04148 Efferocytosis
139939178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139939178
Membrane trafficking [BR:
aamu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139939178
Hops complex
139939178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
TPR_Vps41
zf-RING_5
zf-RING_Vps41
zf-RING_16
zf-RING_11
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-ANAPC11
zf-C3H2C3
zf-rbx1
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
139939178
NCBI-ProteinID:
XP_071791054
LinkDB
All DBs
Position
6:10747649..10767819
Genome browser
AA seq
980 aa
AA seq
DB search
MASLFDQYEQATARAASSITMVPRETVAAPITSGYVTAKMEEEVRIFSKMKINFTPPRPI
THLIVNNNMLMMAMSDNVVLRIDLEHPDQPDEVKLGDDRIHKLFLDPTGHHLIISTEQQD
VLYLSRTGRKAKQLQKLKGHLIDSIGWNKLNTSESTTAEILVGTSRGLIFETEIQSGDDS
RFFQQSLEQYWKQVFNLGKEGPVPVTGLEVEHVQPSPQNERRFFVMATTPGRLYQFIGVI
PSSSETPVFQNVFHKYEASPASFLELPGNFGYSKLQFFYPKSKTVPSHFAWMTGPGIYFG
VFDFNNQSTDNVTKDSRLLPYPESDKEGSSDVEPIAMTMTEFHVLLLFPDRMKVMCVLNE
QLIDEDVYHARYGKILGICRDRTRGTIWTFTDQSVFKYKVVKESRDVWRMYLDQGDFDRA
KEHCRDNPANLDKVLTRQAEHFFEKEKYDKSALYFAMTERSFEEVALKFIEAQQTTALRM
FLSKKLSALKHEEKTQMTMLVMWLIELYLNQLGEFRSKEEARNTHDTVHTEFQKFLAQSM
VRDCLSGNVDTVYDLIASHGDIEDMVFFAMLMKDYERVISHHIQHDDYHSALEVLRKPKD
TELYYKFSPVLMQHIPNELVSAWIEQGRTLDPKKLIPALVQYDHSAQSSQANEAIRFLEF
CVLLLDNTEQAIHNYLLALYAKYQPEKLMGYLERQGDIEDNVHYDLKYALRLCAEHAHKR
ACVHIYTTMGLYEEAVDLALQVDVDLAKQSAEKPEEDDELKKKLWLRIARHVVEEQSDIQ
KAMLVLQECPQLKIEDILPFFPDFVTIDHFKDAICSSLADYNQHIESLKNEMKDATESAK
AIRGDIQEMRNKYGIVGGNQKCSSCNYPLLTRSFYLFPCQHMFHSDCLINEVLPHLTIAK
RNLMSSLQRRLSQLQSHRSTTATAPTTDGITKRDEVDQIKNELDDITAAECVFCGEIMIR
SVDRPFIEPDEYEATMKSWE
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctatttgatcagtatgagcaggctacagctagggctgcgtcaagcatcact
atggtacctagagaaacagtcgctgcccctatcacctctggatatgttacagctaaaatg
gaagaggaggttcgcatctttagcaagatgaagataaatttcacgccgccccgacccata
actcatctgattgtaaacaacaacatgttgatgatggccatgtcggataacgttgtctta
cgaattgacttggagcatcccgatcaacctgatgaggttaagcttggtgatgatcgcatc
cataaactgttcttggatccgactggtcatcatcttatcatcagcactgagcaacaagac
gtcttgtacctatccaggacggggcggaaagccaaacagcttcagaaactcaagggccac
ctcattgattctattggatggaacaagctgaataccagtgaaagcaccactgcagagata
ctggtgggaaccagtcgaggtttgatatttgagacggagatccagtctggagacgacagc
agattctttcaacagagccttgaacagtattggaaacaggtctttaatttgggcaaagag
ggcccagtgccagtcaccgggctagaggttgaacatgttcaaccttcacctcaaaacgag
cgtagattctttgtcatggcaacaacaccaggacgtctatatcaatttataggagtaata
ccaagttcttcagagacaccagtatttcagaatgtctttcataaatatgaagcgagcccc
gcaagcttcctcgagttgcccggtaactttggttacagcaaacttcagttcttctatccc
aaatccaagacagtgccatcacactttgcttggatgacaggaccgggcatctactttgga
gtgtttgacttcaacaaccaatcaacagacaacgtgaccaaggacagtcgtctcttaccg
taccctgaaagtgacaaggaaggtagcagcgatgttgaaccaattgccatgacgatgacc
gagttccatgtgttgcttctattccctgacaggatgaaagtgatgtgtgttttgaacgag
cagcttattgatgaagacgtgtatcatgcaagatatggtaaaatcttaggcatctgcaga
gacaggaccagaggtaccatctggaccttcacagatcaaagtgtcttcaagtacaaagtg
gtcaaagaatcgagggatgtctggcgaatgtatcttgaccaaggagactttgaccgagcc
aaagaacattgtcgggacaatccggccaacttggacaaagtgctcaccagacaggctgaa
catttctttgaaaaggaaaagtatgacaagagcgccctctattttgccatgacggagagg
tcattcgaagaggtcgcattgaagttcatagaggcacaacagacgaccgcattaaggatg
ttcctgagtaaaaagctgagtgctctaaagcatgaggagaagacccagatgaccatgcta
gtcatgtggctgattgagttatacctcaaccaactcggtgagtttcgctccaaggaggaa
gctcgtaacactcacgacactgtccacaccgagttccagaagttcctcgctcaatccatg
gtcagggattgtctgagtggtaacgtggacacagtgtatgatttgatcgccagccatgga
gacattgaagacatggtgttctttgccatgctcatgaaagattacgagcgagtcataagt
caccacatccagcatgacgactaccactctgccctagaggttctacgcaaacccaaggat
accgaactgtattataaattctccccggtgctcatgcagcacattcccaacgagctggtc
agtgcttggatcgaacagggcaggacgctagatcctaagaagttgatcccggccctggtg
cagtacgaccattcagcacaatcaagccaggcgaacgaggcaatccggtttcttgaattc
tgcgttctgctcttggataacaccgagcaggccattcataactacctgctagcattgtac
gccaagtaccagccagagaaactaatggggtatctggagagacaaggagatattgaagac
aatgtgcattatgatctgaagtacgcattaagactctgcgctgaacatgctcacaagagg
gcgtgtgtccacatctacaccacgatgggactgtatgaagaggcagttgatctagcatta
caggttgacgtagaccttgccaagcagagtgccgagaagccagaagaagacgatgaactc
aagaagaagctttggttacgcatcgctagacacgtcgtagaggagcagagtgacatccag
aaggccatgctggtactccaagaatgcccacaactcaagatcgaagacatcttgccgttc
ttcccggactttgtcaccatcgatcacttcaaggatgcgatctgcagctccttggccgac
tacaaccaacatattgagtctcttaagaatgagatgaaagacgccacagagagcgctaag
gccatccgtggggacatccaagagatgagaaacaagtatggaattgttggaggcaaccag
aaatgttcatcgtgcaactacccattgttgacacgttccttctacctcttcccttgccaa
catatgttccactcagattgtttaataaatgaggttttaccacacctgacgatagccaag
cgcaatctaatgtcttcactccaaaggcggctgtcccagctacagtcccatcgcagcacc
acagcaacagcgcccacgactgacggcatcacaaagcgcgacgaggtggatcagatcaag
aatgagctggatgacatcacggcggctgaatgcgtgttttgtggggagatcatgataaga
tcagtggatagacccttcattgagccagatgaatatgaggcgacgatgaaaagctgggaa
taa
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