KEGG   Asterias amurensis (Northern Pacific seastar): 139939448
Entry
139939448         CDS       T10870                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
aamu  Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aamu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139939448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aamu03021]
    139939448
   03036 Chromosome and associated proteins [BR:aamu03036]
    139939448
Transcription machinery [BR:aamu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     139939448
   Coactivators
    SAGA/TFTC/STAGA complex
     139939448
Chromosome and associated proteins [BR:aamu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     139939448
    STAGA complex
     139939448
    TFTC complex
     139939448
    SAGA complex
     139939448
    SLIK complex
     139939448
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd TFIID_NTD2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_EIPR1 WD40_like Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Tricorn_2nd WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_ELP1_1st Beta-prop_IP5PC_F Beta-prop_NWD2_C Ge1_WD40 eIF2A LisH_PAC1 Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 139939448
NCBI-ProteinID: XP_071791479
LinkDB
Position
7:15355265..15374216
AA seq 647 aa
MDKQTLAAVLQFLRKNNLAETEELLKKEANVEDTDEGVGTSTDQDVSSVLSAYNSDGDPC
LYEEFYRGLQNLVESSLDSSKSELSQVLYPVFVHMYLELVYNGHENQAKKFFAAFGEDQE
EHHQEDLTQLATVAKKEHMIHNELMMNYRTSKYVIRMCRNSYQTLKKQLNDKQITMVLII
VEEHLFIDVFDGVPRNKQQIEATAGGMVGEARRDANKGRVYYGLLKEPEIALPIEEDDEG
GEEGDKPKRKRPKKDSSASKKNKPDPNAPPANRIPLLDLKDSDKIDRAIALRELSKRIRL
GPDCLPSICFYTFLNAYQGLISVDISDDSSLMVAGFADSCIRVWALTQRKLRNMKSGSDL
ALIDKEADDIMERIMDDRTSSDCRTLHGHSGSVYSVSISPDRTYIVSGSEDGTVRVWSMY
TFTNLVCYKGHNYPVWDVQFGPYGHYFVSGGKDRTARLWSTENYQPLRLLAGHFSDIDCV
KFHPNSNYVATGSSDRTIRLWDVQNGKCVRIMTGHKGQIQILCFSPNGHYLASGGADARV
LIWELRHGHLVAELTEHTDTVYALAFCRDGSVLASGGIDHCIKLWDAKKVATEVEAEDMT
TTPHIVQSEKSKLLLGSYPTKATAVHYLHFTRRNLLLAAGSYTTVSS
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggacaaacaaactctagcagccgttctacagtttttacgaaaaaacaacttagcggaa
actgaggagttactcaagaaggaagctaacgtagaggataccgatgaaggagtgggtacc
agtactgatcaagatgtctcctcagttttatccgcctataacagcgacggggatccttgc
ctatatgaagaattttaccgcggtttacagaaccttgtagaatcctcacttgactccagc
aagagtgaactttcccaggtcttgtatcctgtcttcgttcatatgtatttggagcttgtc
tacaatggccatgaaaaccaagccaagaaattctttgctgccttcggtgaggaccaggag
gaacatcatcaagaagatctgactcaacttgcaactgtagccaagaaagagcatatgata
cacaatgaactcatgatgaattacaggaccagtaagtacgtgattcggatgtgtagaaac
tcctaccaaacattgaagaaacaactgaatgataaacagattactatggtactcattata
gtagaggaacatctctttattgatgtttttgatggagttcctcggaacaagcagcaaata
gaggctactgcaggaggcatggttggagaagctagaagagatgccaataaaggaagagtt
tattacgggttactgaaagaaccagagatcgctcttcctatagaagaagatgacgaagga
ggagaggaaggagacaaaccaaagagaaagagacctaagaaagattcaagcgccagcaag
aagaacaaaccagatccaaatgccccaccggccaacagaatcccccttcttgatttgaaa
gactcggacaagattgaccgtgctattgctctgagggagttatccaaaaggataagactt
ggcccagactgcttgccatccatctgtttctacacgttcctcaatgcgtaccaaggttta
atatctgtagatatcagtgatgactctagtctgatggtggctggttttgctgattcttgt
atccgtgtctgggcattgacccagaggaaactacgtaatatgaagtctggtagtgatctt
gctctgattgacaaggaggctgatgacatcatggagaggattatggatgataggacatca
tcagattgtcgtacattacacggtcacagcggttcagtctattcagttagtattagccct
gatagaacctacattgtatcaggctctgaagatggcactgtcagggtgtggagtatgtac
acatttactaatctagtctgttataaaggacacaactaccccgtctgggacgtccagttt
ggcccatatggtcattactttgtgtctggtggtaaggataggacggcaaggctttggtca
acagaaaactaccaaccactccgtttacttgcaggtcacttctcagatatagattgtgtt
aaatttcatcccaactccaactacgttgctactggttcaagcgataggactattcgatta
tgggacgtacagaatggaaagtgcgttcgaatcatgactggacacaaggggcagatacaa
atcctgtgtttctctcctaatggtcactatcttgcttcaggaggtgccgatgctagagtt
ctgatatgggagctaagacatggtcacctagtagctgaacttactgaacatacagacact
gtctacgctctggcattctgcagggatggtagcgtactcgcatcaggtggtattgatcac
tgcataaagctatgggatgctaagaaagtagctacagaagtagaggctgaagatatgacc
acaacacctcatatagtacaatcagaaaagagtaagttgctacttggttcttatccaacc
aaggccacagctgtacactatcttcactttacaagacggaacttactcctggctgctggt
tcttatacaactgtctccagttaa

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