Asterias amurensis (Northern Pacific seastar): 139939729
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Entry
139939729 CDS
T10870
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamu03009
]
139939729
Ribosome biogenesis [BR:
aamu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
139939729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EZ
Utp12
ParcG
Motif
Other DBs
NCBI-GeneID:
139939729
NCBI-ProteinID:
XP_071791921
LinkDB
All DBs
Position
7:complement(1341955..1376921)
Genome browser
AA seq
2884 aa
AA seq
DB search
MKSKSSNHRNENTYRFQTFSERISNINIDVIRKGGRIDRTPDDSDTFFAAGLAKWMDLNC
TQDFTNFTRDISGQVDSFPQLVHHEEEIITALKTHLKVKKSLAYQPLLDLLVQLARDLQT
DFYPHFEEFFSIIVSLLNTQDTELLENAFRSFGYLFKFLWRYLVRDIHIVFRFYSPLLSE
HQKEHIRNFAAESFAFLMRKVKDHGDLFDMMLQSLEENPDQTTGLGRLLFEMIKSVKKQF
HSCTEKVLPILLSKLGPVHFAEGVAKQLPWKLCLETLSAMFEFMAEWTTKDHAGVICRIL
QEALTAKYNHLISETDETRRDEFAEHLSGLVILMNQWVGYHGGYLIQHPDSYAAVILKLI
ADGAIQGQCADAVLDLTATLLNTTQCDLNNESVTTLIMVVFNSSFEQIQVLHFSRQLFDM
GSFEKDVLHPLLHFCHAVMSETAPSSSSVHHGVLFTLCNLILSKQPPITDGAMLDGYSPY
VVDFSLDVYKSQTKKKKSKKHAANFPEYLVSLLEFSPELLGQENVVSALWGALVCLPSAR
PLNGRNVTPKLKSLVETLWETAEQQEGTTKDTLLYVLSQASCTLLLCGKEEPTQSLLEED
FILKVLRSCPTSSHVLLVGDLYFTQSAILGNTSVLSDENLQTLFPVLQPNLSSPHKQVRT
LTLRILSQFPVTLPSIPDLPVRQVCVFKLCLEAEMVPISVENYREKLKQLQKLSFDAVLP
NVPVGNFKEVALRFLIGTLYVNFQLLWQPTMELIKSHAYGMEKKCFWSVYMEHLNDLASV
HESAIRLRDDASTPTLEDSTEVESEDTQDLTELYGKVYRESTADADRPDPWNVRQMMWRT
MGLFADRAEGRSRDLVPLLFRFIENEFQQSNVNNAPAQDIRVRSSQNSNANVDAIVDTSM
DQREDGDESWVELQEDEEEEGEEVEETPRRGRRKGKRKKIKGSVYRALVTYLQLFSRFKD
PKSMYKEPQLRQLYLKLLSSNFPDIQKTVLACLMTYNHPYLNPYKENLDGLMEDKKFRGM
LVQFSIDETAGVVAANHREGLLPILMRILYGKMMSKTGPGTQGKSGGAVRRATILRFIAG
STASEMGVFLDLVLEPCQPIIKGDCRTMVTSYLESLTLPAVIPLKKQQSMLDTIGMIFSK
LGLAIAPYATTILHLITSLLASYDRLLDQREQIQVYAVGQLKKLRQLALLRLVEFFGVFE
EHPFSANEIDCIFEAAVWPQIGSLANECLATPTPLLKLILAWSKNPRFHPLFAKHHPSDQ
SCTVLPSVTALLSAPTVSDAVVAMVMEIVQSLLMEDDPEMEDDGERSLEVNDLLEVKLES
KQFTEPPSLGTRLLLPHVPAVLTYLSSSVGKSTQRKGERSSLPMKDLNIISKISLYVSDP
EQSAMLVGLLLPILQRTNERHETTELDILHTVKNVIKQCLTPADFLGLLSRLFYRLTFRQ
SRAALCDVFTAMSDTDPTMADIARLMRQLNSWDRKHVDERDYSYRLAGFRLANERLASME
TIDVVFLTPVMYNCLYMIMKIDDMSMRDNSSYFLKALVTKLATEEPDSEHSNFDNVITHR
LAPAIRESLRLKSENSRHEMIGLLSDIVKLFPNHPQFQCMGILRNEDIEKDFFENIRHIQ
HHRRMRALRLLALHAKQGDFTHSALYQFLLPMATAIIFDPVISAKNPNLVIEAIGAVGAV
ASQLPWRWYYLLLQQYLRLVTKSIDQQKTAVRLVVAVLDSFHFDLSLSEGVENVQVGKTS
TKNEPPPSENSAEDKTGEENKKSEVAKTSSDSDDENNDEDDEKEVEEGDINEDDEKDTEK
EVDKHRGQVTMATKIHRIIVASILPKLHKTLTKKAKSDEHHKKARFAVAEDDEILRVPIA
LAMVKLLQALPKKTLHQNLPNVLIKVCQMLKSRAKDVRDVSRDTLVKILASLGIGYFSFI
LKELRHALTRGYQLHVLSFTLHALLHSSMPTLQPGNLDASISSMVEVFNKELFGVVAEEK
EVVGIVGKLEEARSIKGYDCYEMVAKVIGQGSLTRLILPLKEILETSHSHKVVRKASEVL
KYVTMGLINNPGITVDSMLIFIHGLATETIPLMTPLERSKGKVKPPPDPRAAPESTYLLL
PAPKKGGTTPQVSIKTNMYLIVEFGLQLLHMNLKRSKLSPSNQQHLQMLDPFVGILLQSL
TSKYTKVTVVALRCVKWLLRYPLPSIDKSAVKLTKTLFKILNEYATAGAAKGANFDIVVC
CFKAVTVLVRDVKQHTIDEKQLQVLLTYAEEDMHDHTRQATAFGLLKAIMSRKLIVPEMH
DVMKKVAQLSITSGSSSVRLQCRQVIMSFLLDYPLGKKVRGHIEFFVSQLNFELQTGRES
TLEMLATIFSSFPQKTLEQYAGMFFIPMATRLINDESAKCRKLTALAIKSLLQKIRIDKR
DELFAMTTHWLQDNKPSHQRLASQLCGIFVEAEEEGFQRRLDTVLPQIVELIRPETLKKE
SPVEIEDEVSMEERHSDHMLFNLLSALAKMFKCCSLIGSRVHTQTMNAIWESIQTHLLHP
HTWVRLVSAQLFGELFASKQPDSLAKALLKASSTQTDPNEKRVGANPKRKRKAVEVGEEE
RGGGGVREVGQEYPFNHGPDVIRDLVCIFCSQLQSHFIDKKLSDQVVRNLVFVGKVVRHL
NPDEGLITDTEDEIPDDDGEEVMDDLTQTQEGSTTNKRTLETTHFVSNLSWMIRKMCRIA
SSEAAKSPKKTLKRNCVIKWLAAISVDVGGERLKPHLKQILKPMCREISDTKSHEDNDLR
TLCQEALDLIKSLVGLETFSHAYADVQRDITKARIERKQKRALQAVADPVQAAKRKEKKH
QNKKESKKRRIQQMRPTYQLGKRPRLGYLDSSSSVSIQEWKYVESQARRGYLDSSSSVSI
QKLK
NT seq
8655 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgaaatcatcaaatcacagaaatgaaaacacatacaggttccagacgttttcc
gagcggatttccaacatcaacatcgatgtcatcagaaaaggaggtcgtattgaccgaaca
ccagatgattcagatactttctttgctgcgggtttagccaaatggatggacctcaactgt
actcaagatttcactaatttcacgagagacatctctggtcaagttgatagtttccctcag
cttgtccatcatgaagaggagattataacagccctcaagacacatctaaaggttaagaaa
agcttggcgtaccagcctctacttgacttgcttgtgcaactggccagggatctccagact
gacttctatccacactttgaagagttcttcagtatcattgtctctctcctcaacacccaa
gacacagagctccttgagaatgccttccggtcgtttggctacctcttcaagttcctgtgg
cggtatcttgtcagagacatccacatcgttttcaggttttattcgcctctcctgagcgag
caccagaaggaacacatccgtaactttgctgcggagagcttcgcattcctcatgaggaaa
gtcaaggaccacggtgacctctttgacatgatgctgcaaagcctggaagagaatcctgat
caaactacaggtctcgggagattactgtttgagatgatcaaaagcgtcaagaaacagttc
cactcatgtacagaaaaggttcttcccattctgctgagtaaattaggaccggtgcatttc
gctgagggcgtcgccaaacagttgccatggaaactgtgtctggagacactaagcgccatg
tttgagttcatggcagagtggacgaccaaggaccatgctggagtgatatgtagaatttta
caggaagccttgacagcaaagtacaaccacctgatctctgagacggatgagaccagaagg
gatgaattcgctgagcatcttagcggactagtcatcttgatgaaccaatgggttggttat
catggaggttatctgatacaacatcctgactcatatgcagctgtgattttgaagttgata
gcggatggtgcaatccaaggacaatgtgcagatgctgtgctggacctgacagcgacccta
ctcaatacaacccagtgtgacctcaataatgagtctgtcactactctcattatggtggta
ttcaacagtagctttgaacagatccaggtactacacttcagtcgtcaactcttcgacatg
ggatcttttgaaaaggatgtactacaccctctgttgcacttttgccacgctgtgatgagt
gaaacggcgccctcgtcatccagcgtgcatcatggcgtcttgttcacactctgcaatctg
atcctcagtaagcagccgcccataacagacggagctatgctggacgggtactcaccgtat
gtggttgacttcagtctggatgtttacaaaagccaaaccaagaagaagaagagcaagaag
catgcagcaaatttcccagagtacctcgtgtcgttactggagttcagcccagagttactc
ggccaagaaaatgtggtgtctgcactgtggggcgccctcgtttgtctacctagtgccaga
ccccttaatggtcggaatgtgacgcccaagttgaagagcctcgttgagacgctgtgggaa
acagccgaacagcaagagggtacaaccaaagacacactgttgtacgtgttatcgcaagct
tcatgcacgctactcctctgtggtaaagaagaaccaactcaatctctcttagaagaagac
ttcattctgaaagttctcagatcgtgtccaacgtcttctcacgtactccttgtaggagat
ctatacttcacccaatcagccattcttggaaacaccagcgttctttcagacgagaacctt
cagaccctattcccggttctgcagccaaatctgtcctcgccacacaagcaggtgaggacg
ttgacactgcggatattgtcacagtttccagttacactcccatcaataccagatcttccc
gtccgtcaggtgtgtgtcttcaaactctgtctggaggctgagatggtaccaatatccgtg
gagaactatcgagagaaactcaagcaactccagaagttaagctttgatgcggtcctgcct
aacgtacctgttggtaacttcaaagaggtggccttaagatttctgattggaacactctat
gtgaactttcagctgctgtggcaaccaaccatggagcttatcaaatctcacgcctatggt
atggagaaaaagtgtttctggtccgtctacatggaacatctgaacgacttggcgtcagtt
cacgagtctgctatccgtctcagagatgacgcttcaaccccgaccctcgaagactccact
gaggtggagtcggaggacacgcaggatctgacggagctgtatgggaaggtttacagggaa
agtacggccgatgctgataggccagacccctggaatgtcagacagatgatgtggagaacg
atgggtctgtttgctgatcgggcagagggtcgctccagggaccttgtgcctctactcttt
agattcattgaaaatgagtttcagcagtcgaatgtcaacaatgccccagcgcaagacatc
agagtcaggtctagtcaaaattctaacgccaacgttgacgccatcgttgataccagcatg
gatcagagggaagatggggatgaatcatgggtggagctccaggaagatgaggaggaggag
ggtgaggaggtggaggagactccgagacgaggaaggaggaaaggaaagagaaagaaaatc
aaaggatcagtttatcgagcattagtcacctaccttcagcttttcagccgattcaaggat
cccaagtcaatgtacaaggaaccacaactacgccagctctatctgaagttgttgtccagt
aacttcccagacatccagaagactgtcctggcctgcctgatgacctacaaccacccctac
ctcaacccctacaaggaaaacctcgacgggctcatggaagacaagaagttccgtggtatg
ctggtgcagtttagcattgacgagacggcgggcgtggttgcagccaatcacagggaagga
cttctgccgatactcatgaggattctttacggaaagatgatgagcaagacgggacctggc
acccaaggaaagagcgggggtgctgttcgccgcgccacgatcttacgcttcatcgctggt
tccacggccagcgagatgggtgtgtttctggaccttgttttagagccatgtcagcccatc
atcaaaggtgattgtcgaacgatggtgacttcgtaccttgagtcattgacacttcctgcc
gttattccactcaaaaaacagcaaagtatgttggacaccataggcatgatcttcagtaag
ttaggtcttgcgatcgcaccctacgctaccaccatcctccatcttatcacctccctgttg
gccagttatgaccgattgctggaccagcgagaacagatacaagtctatgctgttggccag
ctgaagaaacttcgccagctagccctcctgcgattggttgaattctttggggtctttgaa
gagcacccgttctcagccaatgagattgattgtatcttcgaggcagcggtgtggccccag
atcggcagcctggccaatgagtgtctagccactccaacgcccttgttgaagctcattctt
gcgtggagtaaaaacccaagattccatcccctctttgccaagcaccacccctctgaccaa
agttgcacggtcctccccagcgttaccgccctcctgtccgccccgacggtctcggacgcg
gtcgttgccatggtgatggagattgtgcagagccttctcatggaggatgatcccgagatg
gaagatgatggggagaggtcactggaggtcaatgacctactggaggtcaaattggagagt
aaacagttcacagaacctccgagcctgggaaccaggcttctcctcccccatgtaccagcg
gtccttacatacctcagctcatctgttgggaaaagcacccagaggaagggagagcggagc
agtctaccgatgaaggatcttaacatcatctcaaagataagcttatatgtcagtgatccc
gaacagagtgcaatgctggtcggccttctacttccgatcttacaaaggacaaacgaaagg
catgagaccactgagttggatatccttcacacggtcaagaatgtgatcaaacaatgtctt
actcctgcagacttcttaggccttctctcccggctgttctaccgtctgacgtttcggcag
tccagagcagctttatgcgatgtcttcaccgcgatgtctgatacggatccaaccatggcc
gatattgcccgtctcatgaggcagctcaactcctgggatcggaaacatgtggacgaacgc
gactactcgtaccgactggctggattcagattggccaatgagaggctcgcatcaatggaa
accatcgacgtggtgttcttgacgcctgtgatgtacaattgcctctatatgataatgaag
attgacgacatgtcgatgcgagataactcctcctacttcctgaaggctctggtgacgaag
ctagctactgaggaacccgacagtgaacattcaaactttgacaatgtcatcactcacaga
ctcgctccagccataagagaatcgctgagattaaaatcagagaattccaggcatgagatg
ataggacttctgtcggacattgtcaaactattcccgaatcatccgcagttccagtgcatg
ggcatcctacgcaatgaagacatcgagaaagacttctttgagaatatcagacatatacag
caccatcgccgcatgagggcattacgccttctagccctccacgccaaacaaggcgatttc
acacacagcgccctctatcagtttctcttgccaatggcaacggcgatcatctttgatcca
gtgatctcggccaagaatcccaacttggtgattgaggcgatcggcgcagtcggagctgtc
gctagccagttgccttggcgatggtattacctgttgctacagcagtatttacgactggtc
acaaaaagcatcgaccaacagaagacagccgtcaggttggttgtcgcagtcttggactcg
tttcattttgatctgtcgctctcggaaggtgttgaaaatgtacaagttggaaaaacatcc
accaagaatgagccacctccgtcagaaaattcagcagaagataaaaccggagaagaaaat
aagaagtccgaagtagcgaaaacttcctctgatagcgatgatgaaaacaacgatgaagat
gacgagaaagaggttgaagaaggtgatatcaatgaagatgatgagaaggataccgagaag
gaggttgacaagcatagaggccaagttaccatggcaaccaagatacatcgtatcatcgtg
gccagcatcctgcccaagctgcacaagacccttacaaagaaggctaagagtgacgagcat
cacaagaaagctcgctttgctgtcgcagaagatgatgagattctacgagtcccaatcgcc
ctggccatggtcaagctcctacaggccctgcccaagaagaccctccaccagaacctcccc
aacgtcttgatcaaggtgtgtcagatgctgaagagtagagccaaggatgtccgagacgtc
agccgggacacgttggtgaagattctggcgtctctcggcatcgggtacttctctttcatc
ctgaaggaactcagacatgccttaacaagaggctatcagcttcacgtgttgagtttcacc
ctccatgcactcctccatagctccatgccgactctacagccagggaacctcgatgctagc
atcagctcaatggtggaggttttcaacaaagaactttttggggtggttgctgaggaaaaa
gaagtagttggcattgtgggtaagctggaggaggcccgcagcatcaagggttacgactgc
tatgagatggtagctaaggtcataggtcagggttcattgacccgacttattctcccattg
aaagagattctagaaacctctcacagccacaaggttgtccgtaaggccagtgaggttctg
aaatacgtaaccatgggactgatcaataatccagggattaccgtggactccatgttaatc
tttatccatggactggctaccgagaccatcccattgatgacacccctggaaaggtcaaag
ggcaaagtgaagcctccaccagaccctagagccgcccctgagagtacgtacctcttactc
cctgccccaaagaagggcggaacgaccccacaggtcagcatcaagaccaacatgtacctc
atcgttgagtttggacttcagttgctgcacatgaacttgaagagatccaagttgtcgcct
tccaaccaacaacaccttcagatgttggatccgttcgttggaattctcctgcagtcactc
acatccaagtacacaaaggtgacggttgtcgctctccgctgcgtcaaatggctgctgcgc
tatcctctgccctctatcgataaaagcgcagtcaaactaacaaagacgctttttaaaatc
ctcaacgagtatgccactgcaggagcagccaagggcgctaactttgacattgttgtgtgc
tgcttcaaggctgtaacggtgctagtccgagacgttaagcagcataccattgatgagaag
cagctacaggtattactgacctacgctgaagaggacatgcatgaccacaccaggcaagcc
actgcattcggcttactcaaggctattatgtccaggaagttgattgttccagagatgcac
gacgtcatgaagaaggtcgctcagctctccatcacatcagggagttcatccgtcaggctt
cagtgcagacaggttattatgagctttctccttgactatccactgggtaaaaaagtcaga
ggtcacattgagttctttgtcagccagctgaactttgagctgcagacgggtcgtgagtcg
accctcgagatgttggcaacgatcttctcaagtttcccgcagaaaaccttggagcaatac
gctgggatgtttttcattcccatggcaaccaggctcatcaacgatgaatctgccaagtgc
cgtaagctgactgctctggccatcaagtctttacttcagaagatacgaatcgacaagaga
gatgagttgttcgccatgacaacgcactggcttcaagacaacaagccatcccatcaacgt
ctagcgtcccaactgtgtgggatctttgtggaggcagaggaggaagggttccagcgtcgg
ttggacaccgtgttaccgcagattgttgagcttatccgaccagagactttgaaaaaggag
tcgcccgtggagattgaggatgaggtatcgatggaggaaagacacagcgatcacatgttg
ttcaatctactctcggcactcgctaagatgttcaagtgttgctcgctcattggcagcaga
gttcacacccaaaccatgaacgcaatctgggaatctatccagactcatcttcttcatccc
cacacctgggtgcgtctggtttcggcccaactcttcggcgaactgtttgcctccaaacaa
ccagacagcttggccaaagccttgctaaaggcgtctagtacccagactgatcccaatgag
aagagggtcggagccaacccgaagagaaagcggaaggctgtggaggttggggaagaggag
aggggcgggggcggagtcagagaggttgggcaggagtacccgttcaaccacggaccggac
gtcatacgggatttagtctgtatcttctgctcccaactgcaatctcattttattgacaag
aaactcagtgatcaggttgtaagaaatctggtctttgtcgggaaggtcgttcgtcactta
aacccagatgaaggtcttataacggataccgaagatgaaatcccagacgatgatggagaa
gaggtcatggatgacctcactcaaacacaagagggcagcaccaccaacaagagaacgctt
gagacgacgcattttgtgtctaatctgagttggatgatcaggaagatgtgtcggatcgcg
tcgtcggaggccgccaagagtcccaagaagacattgaagaggaattgcgtcatcaagtgg
ctggcggcaatctcagtggatgttggaggagagagattgaagcctcatcttaaacagatc
ttaaaaccaatgtgccgagagattagtgacacaaagtcgcacgaagataatgatttaaga
acactatgccaggaggcactggacctgatcaagagcctagtgggactggaaaccttctct
cacgcctacgcagacgtccaacgagacatcacaaaagccaggattgagcggaaacagaag
agagcgttgcaggctgtcgcagaccctgtccaggcagccaagcgcaaagagaagaagcac
cagaacaaaaaagaatccaagaaaagacgaatccaacagatgagaccaacatatcagttg
gggaagagacccaggctagggtacctagactcatcaagcagtgtatcaatacaagaatgg
aaatatgtagagagccaggctaggcgagggtacctagactcatcaagcagtgtatcaata
caaaaattgaaatag
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integrated database retrieval system
