Asterias amurensis (Northern Pacific seastar): 139939864
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Entry
139939864 CDS
T10870
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139939864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139939864
Membrane trafficking [BR:
aamu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139939864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_VPS8_2
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_11
Beta-prop_HPS5
WD40_CDC20-Fz
TPR_LAA1_C
Beta-prop_WDR3_1st
zf-RING_UBOX
Beta-prop_WDR5
zf-RING_5
Beta-prop_NWD2_C
EIF3I
Beta-prop_THOC3
PHD_NSD
zf-RING_2
MlaC
zf-rbx1
Prok-RING_1
PHD
PI3Ka
WD40_Prp19
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
139939864
NCBI-ProteinID:
XP_071792117
LinkDB
All DBs
Position
7:complement(8513671..8552642)
Genome browser
AA seq
1429 aa
AA seq
DB search
MADSMSEVNSADDDGVALTGLASASAAAMNLDVDLSLDDVTIDDDEFDIPELDSAPTLDS
ILNENDEPFDIDAQSLSLYGQTSDGSAPVSEPNTPSRSPHKYGRKKSVQYPNHGSIIRHV
VLKNISSQLMSASDRVQAGSPSAMAISQYIAVGTSHGLILVFDPNQVLKWCLGSTALGTQ
YGAVSTLGINNDCSRLLAGFARGQITMWDLTSGKLLRTITDAHPPGSAVLHIQFSDDPTM
AICSDSGGSVFELSFKRVMGMRTCESRCLFSGSRGEMATIAPLHVHSTIKEHPMKEMAIL
AMATLSKVFIVSVRPKLTVIFTKQLKGDSSTLPLLAWQFVVIQGKDTDRVVDPVLAFART
NMVYFYQVLYSEDGLVKVVPLQSIKLPYNLIALHWFNPKTLVAIDTTERLHLVDVRTEEE
LEVVDLVDIELVYGSSFFKSLATGGNVSQAMALAGERACYQSISSYKGQLVILGTKSLHV
MTTRAWSERLDILEKEDKYKAALALALSFYNGKAKAVVGLFGNTEDRGKTVGEKILELLF
TYVDVSMKHGPVRGAIHLLEEHFQKVVPVCVDYCQTLDRRDILFGPIYDRFQQDSIAKGV
FLECLEPYILNDMLTSITPGVMKDFVDHYKTKEMVHSVEACIVHMDIASLDIHQVVSLCW
AHGLYDAIIYVYNKGMNDHITPLEDLLQVLGQAVTSGKQLTDQQIKLGNKLLVYISCCLA
GRAYPLGDIPSDLIKSVKEGVWKCLTSLHTKQANEEEHVYPYLRTLLHFDTREFLNVLAL
AFEEPEFASQGSSYAAGLQSKQRIVDILLQVMVESIGFSPSQVGCLFTFLARQMAKNDNN
IVVNRLLFEQVVEFLSNPADETRHEEREQALLQLVNAGGLEQVDQQKLLRLAEGAKFYRV
SELLYEKRRQFDRILLCYLRDPARKHAVFTYINNVMMESCYTDPEKEAVQSEALENLQDL
VAIDSKETAQLVLKVFANSLDEVIDKLHDRLKLQYEFLQGVFDYRDATSTALGPKEQSQS
DPAIHEKYIDLMCQFNPSAVHHYIRNVEGYRLEETLQIVRRRKIADATAYLLEMAGDIQG
AFRIMLESLSSSIRILLDTMQSDKTGDNTKDPSVAICGMQAGLMVIIQLCQRNSAKLDEP
EREALWFPLLDLMMASQRKLKSSLREDHFEAFKDLTRHVLNSMMGYIALPAVLQKIMQDP
TYSTGKFGEIKELILGMLDTYNYEKTLLRTTNNLLDHDLYWSLNNLTQAVSRGLIPRKES
CFICHRNFAKIGEDEAVVVFSCGHTYHTQCLHTSGCSSMIEGKQHWTCYQCYSTRRTGKG
RLLNVRKSEHFASVAGEKGMAERGSVKKSGAAVAGASGKNESVQMDPEQLAALELLKKRL
EGPSRLAVLCEVTRAYRDQPSSASGYVRADSMLLSDSFKLRLAPPPSED
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggcagactccatgtccgaagtaaattctgctgatgatgatggagtagctttaactgga
ttggcgagtgcttctgctgcagcaatgaatctagatgttgatttgtcacttgatgatgtt
acgattgatgatgatgagtttgacattccagagttggattcagctccaacattagacagt
atcttgaatgagaatgatgagccgtttgatatcgatgcacagtctttgagtctctatggt
cagaccagcgatggttcagccccagtatctgaacccaacacaccgagcaggtctcctcat
aaatatgggaggaaaaagagcgtacagtatccgaaccatggttctatcatccgacatgtt
gtactcaagaatatctcatcccagctcatgtctgcatcagatcgtgtacaagcaggaagt
ccgtcagccatggcaatctctcagtacatagcagtaggaacctcacatggccttattctt
gtctttgatccaaatcaagtgttaaaatggtgtcttgggagtacagcactaggaactcag
tatggtgcagtatcaacattgggtatcaacaatgattgtagtcgacttctggctgggttt
gctagaggacagatcaccatgtgggatttaactagtggcaagcttctacgcaccatcaca
gatgcccatcccccaggttctgcagtccttcatattcagttcagcgatgatcccacgatg
gcgatctgcagcgacagcggtggttctgtatttgagctgagcttcaaacgggtcatggga
atgagaacgtgtgaatccagatgtctcttctctggcagtcgtggagagatggcgaccata
gcaccccttcatgttcacagtacaatcaaggaacatcctatgaaggaaatggccatccta
gccatggcaacactctctaaggtttttattgtcagtgttcggccgaagctaactgtgata
ttcacaaaacaactcaagggtgattcgtccacgctacctctcctggcatggcagtttgtc
gtcatccagggaaaagacactgatcgggttgtggatccagtgctggcattcgcaaggact
aacatggtctacttttaccaggttttgtacagtgaagatggattagtgaaagtagttcct
ctccagtcaataaagcttccatacaacttgattgcccttcattggttcaatcccaagacg
ttggttgccatagataccactgaacgtctgcaccttgtagacgtgaggacggaggaggaa
ttagaggtcgttgacctggtggacattgaactggtgtacggcagtagttttttcaagtcc
ttagctacggggggaaacgttagccaagcaatggctcttgcaggtgagcgtgcttgctat
caatccatctcatcctacaaaggacaacttgtcattcttggaacaaagtctctacatgtt
atgacaaccagagcatggagtgagaggctcgatatcttggagaaggaagacaagtacaag
gctgccctggcactggcgttgtccttctacaacggcaaagcaaaggcagttgtgggtttg
tttggaaatacagaggacagaggtaaaacagtgggtgaaaagattttggagctgctgttc
acttacgtcgatgtctccatgaagcatgggcctgtcaggggggcaatccacttgctggaa
gagcattttcagaaagttgtcccagtatgtgtggattactgccaaacgcttgacagaagg
gatattttgtttggtccgatctacgaccgtttccagcaggacagcatagctaaaggcgtc
ttcctggaatgcttagagccttacatcctcaacgatatgctgacgtccatcactccaggc
gtcatgaaagattttgtggaccactataagaccaaggagatggttcatagtgttgaagct
tgtattgtacacatggatattgctagcttggatattcaccaggtggtgtcactctgctgg
gcccatggtttgtatgacgccattatttacgtgtacaataaagggatgaacgatcacatc
actccgttagaggatctacttcaagtcttggggcaggctgtgacgtcagggaaacaactg
actgaccagcagatcaagcttggcaacaaactgcttgtgtatataagttgctgcttagcc
gggcgtgcctatccactaggtgacattccttcagatctcatcaaatccgtcaaagaaggg
gtctggaagtgtcttacgtcccttcacactaagcaagccaatgaggaggagcatgtctat
ccttacctcagaacattgcttcattttgacaccagggagtttcttaacgttcttgctctt
gcctttgaagaaccagagtttgcctctcagggaagctcgtacgcagcaggtcttcaatcc
aagcagcgtattgtcgacatcttactacaagtcatggtggagagcatcggcttctcaccg
tctcaggttggatgtctgtttacattcttagcaagacagatggccaagaatgataacaac
atagtcgtcaatcgactcctctttgaacaggttgttgagtttctctccaatccggctgac
gagacacgtcacgaggagagagagcaagctttgctgcaactcgtcaacgctggaggactt
gaacaagttgatcaacagaagcttcttcggctggcagagggcgctaaattttatcgtgtg
agcgagcttttgtatgagaaaagacgtcagtttgataggattctactctgctacctcagg
gatccagctaggaagcatgctgtctttacctacatcaacaatgtgatgatggagagctgt
tatacagaccctgagaaggaggctgtgcagagtgaagccctcgaaaacctccaggattta
gtagccatagacagcaaagagacagcccagttagtcctcaaggtgtttgccaactcactg
gatgaggttatagacaaacttcatgaccggttaaagcttcagtatgaattcctgcagggt
gtctttgattatcgggacgcaacaagtacagctctcggaccaaaggagcagtcacagtcc
gaccccgccattcatgagaagtacattgacctgatgtgccagttcaaccctagtgccgtc
catcattacatcaggaacgtagagggatatcgcctggaggagactctgcagattgtgaga
cgtcgcaagatagcagatgccacagcttacctcctcgagatggctggtgatatacaagga
gctttcaggatcatgctggagagcttgtccagtagtatacgcatcctgttggatacaatg
cagtcagacaaaacgggcgataacactaaagatccgagtgttgccatctgtggcatgcaa
gctggtttaatggtcattattcaactgtgtcagcgaaattctgctaagctagatgaacca
gagagagaggctctgtggtttccgttactggatctgatgatggcttcacagaggaaactc
aaatcatctctcagagaggaccattttgaggcgttcaaggacctgacgagacacgtgtta
aatagtatgatgggatatattgcactgccggccgtcttacagaaaatcatgcaggacccg
acttacagcacggggaaatttggtgagatcaaggaactgatacttgggatgctggacacc
tacaactacgagaagacgttactaaggaccaccaacaatctcctggaccatgacctttat
tggtcgctgaataacttgactcaagcagtcagtcgtgggttgattcctcgtaaggaatcg
tgcttcatctgtcatcgtaacttcgctaagattggagaggatgaagcagtcgtcgtcttc
agctgcggccacacctaccacacccagtgcctgcatacctcaggttgctcctccatgata
gaagggaaacaacactggacatgctaccagtgttacagcaccaggcggacgggcaaaggc
aggctactcaacgtaaggaaatcagaacactttgccagcgtggctggggagaaaggaatg
gcggagaggggatcggttaagaagagcggagctgccgtggcaggagccagtgggaaaaat
gagagtgtacagatggacccagagcaactagcagcgttggagttactcaagaagagacta
gaaggcccgtctaggctcgcggtgttgtgtgaggtcactagagcgtatcgtgatcagcca
tcgtcagccagtggctacgtccgagcagacagcatgctcctatcagatagcttcaaactc
cgactagccccgcctccttcagaagattga
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integrated database retrieval system
