Asterias amurensis (Northern Pacific seastar): 139940450
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Entry
139940450 CDS
T10870
Name
(RefSeq) slit homolog 2 protein-like isoform X1
KO
K06839
slit 2
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139940450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aamu00536
]
139940450
Glycosaminoglycan binding proteins [BR:
aamu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
139940450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRR_9
LRRNT
hEGF
EGF_TEN
LRRCT
LRR_LRWD1
EGF_C8A_B_C6
EGF_3
EGF_DL_JAG
EGF_MSP1_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
139940450
NCBI-ProteinID:
XP_071792807
LinkDB
All DBs
Position
8:complement(17717171..17880575)
Genome browser
AA seq
1456 aa
AA seq
DB search
MDTPRMRYLIAGLCVLALAMDICEGRRKKSNSDCPTECSCYRGTVDCMNRGLQYVPVNIP
FDTERLNLEGNNITKIRKGDFDNLRKLRVLQLTDNQIVTIERGAFSDLRSVERMRINRNQ
IQSLPELLFSSMDSLFRLDLSSNKLMLISRKFFRGAGLLRNLNLDSNQITCIIDGAFRPL
RMLETLTLNNNNLTTLSSSSFTHMTYLKTLRLSGNNLYCDCYLSWFASWLGLHPRLALST
RCAHPQQFRGFKIPELQVADFRCTGDENHEVMCRVKPLCPGGCTCNSENVVDCRGIGLTE
LPSTFPDGSVELRLEQNQITKIPSRAFTQYKKLKRIDLSNNQIQTIADDAFAGLRSLSSL
VLYGNQISDLSEDIFRGLTSLQLLLLNANHISCIRVGLFQDLISLHLLSLYDNQIMSLAN
ETLAPLRNLQTMHLARNPLICDCNLKWLVEYLEENPVEKSGARCETPRRMNGKRLNQMKS
IKFKCKDSEYQRTAQAGQCFIDADCPESCSCSGSIVDCSDAGFHSVPDNIPTYTTELRLN
ENDISRISADGKFVNLINLNKLDLRNNRISIIEEGAFQGASNMFELLLTNNKLSKVHGRI
FSGLKNLRQLNLRTNRLTCIGNETFIGLKSLRLLALYDNGISTITSGAFDSLKELSTVNL
MGNPLNCNCHMSWLPEWLNSRSVFTGDPICQSPENLRDVPLAGLQKADFTCDENNLNSCL
PSIACPRECACSGTVVRCSRKELTSPPRNIPLTATEIYLDSNQLITIPEGMTGQKSLHTL
DLSTNLITMLPDNAFANMTKLSTLILSYNRIACIPPGTFSGLSSLRILSLQGNDLSTIPD
GVFNDLHSLSHIALGNNPLYCDCKLRWLSDWVKADGFKEPGIAKCADPYDLRGKLILTAP
SRSFLCSEEPDVAIQAKCDPCLSSPCENNAVCTISLTERYLCQCQEGFKGRNCEVELNAC
EEEACLNGGSCHNLNNGGFRCECAAGFEGDLCAVNIDDCKQHRCLNDGICEDGINAYTCF
CSLGYSGSFCEVDKDLCAPNTNPCQNGGVCYDLGRSYRCECLTGFQGINCSESYQDCRSH
PCENGGECRQELNQFICSCTPGYVGQFCSDQPIVVFPQTSPCQGHDCQNNALCFEDSDEF
GCRCLPGYMGNKCEIPTSMTFSQQDAYISRTAPEFSSTVNITVIFATTEENGILLYYGKT
GEADHLAIELFRGHIRVSFDAGNFPAATMFGDEDLNNGEFQRVQVIVLQRNISLKINDNE
VQNATNDGESPFLGLDNLMYIGGAPSKEKEGAVRQWHLRNGSSFHGCMSGFFVNGQPIAP
QGSEPGVAGGCPSLETHDPCENNMCEHGFCKKTETSYTCDCQDGWMGNMCNRRTTCMGER
RTRKVQEGSCSSRETVSDLDCSGECGISCCTPQRVRTRIMTLHCDDGTTIRHKVKLVRSC
ACQACVKRLDIFKGPI
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggatacgccgaggatgagatatttaattgcgggactttgtgtcttagccctagcgatg
gatatatgcgaggggcggaggaagaagtcgaactcggactgcccgacagagtgcagttgt
taccgggggactgtcgactgcatgaaccgcggattacaatatgttccagtcaatatccca
ttcgacacggaacgcctaaatctggaaggaaataatattacaaagattcgcaagggagat
tttgataaccttcggaaattacgtgttttgcagctgacggacaaccaaatcgttaccatc
gaacgtggggctttctcagatctcagatcagtggagcgaatgagaatcaaccgcaatcag
attcagagcttacctgagcttctcttctccagcatggattccctcttcagacttgacctg
agcagtaacaagctgatgctgatttcacgcaagttcttcagaggagccgggttgctcaga
aacctgaacctggatagtaaccagattacatgtatcattgatggagccttcagacctctt
cgaatgctggaaacactgactttgaataacaacaatctgacaacgctgagcagtagtagc
ttcacacacatgacctatctcaagacgctccgactttccggaaacaacttgtactgtgac
tgctacctgagctggttcgccagctggcttggacttcatccacgcctagccttatccact
cgatgtgctcatccgcaacaattcagaggattcaagatacctgagttacaagtcgctgac
ttcagatgcacaggtgatgaaaaccacgaggtgatgtgcagggtcaagcctctttgtccc
ggaggttgtacatgtaactccgagaatgtcgtagactgcagaggaatcggactgacggaa
ctgccttctacttttccagacggctctgtggaactgaggttggaacagaaccagatcacc
aaaatcccatccagagctttcactcagtacaagaaactgaaaagaatagatttgagcaac
aatcagatacaaacgatagcagacgatgctttcgctggactccggtcactttcatctctg
gtgttgtacggcaatcagatctctgatctatctgaggacatcttcagaggtcttacatca
ctccaattgctcctactcaatgcgaatcacatctcttgcatccgggtcggtctcttccag
gatctcatctcactccatctgctgtcactgtacgacaaccagataatgtcactggccaat
gaaacgttggctccactacggaacttgcaaacgatgcatcttgcaaggaaccctctgatc
tgtgactgcaatctcaagtggctagtagagtaccttgaggagaatccagtggagaagagt
ggagcaagatgcgagacaccgagaaggatgaatggaaagagacttaaccaaatgaagagc
atcaaattcaaatgcaaagattcagaataccagcgcactgcacaagctggccagtgcttc
atcgatgcagattgtccagaatcctgcagctgcagtggaagcattgtagactgctctgac
gcgggattccactctgtacctgataacatcccaacgtacaccactgaactgcggctgaac
gaaaatgacatttccaggatttctgccgatgggaaattcgttaatttgatcaacctcaac
aaattggatcttcgtaacaaccgaatctcaattatcgaggagggagctttccagggtgcg
tccaacatgtttgaattgctgcttactaacaacaagctcagcaaagtccatggacgaatt
ttctccggacttaaaaatctgagacaattgaaccttcgaaccaatcgacttacatgtatc
gggaacgagactttcattggactgaaatccctgcgacttcttgctctgtatgacaatggc
atcagcacaataacatcaggagcatttgattctctgaaagaactatccacagtgaatcta
atgggcaacccgttgaattgtaactgtcacatgtcatggttaccggagtggctgaactct
cgaagtgtctttaccggcgaccccatctgccaatcaccagagaacctaagagatgtgcct
cttgctggcttgcaaaaggctgacttcacttgtgatgagaacaacctaaacagttgcctg
ccttccattgcctgcccgagggagtgtgcttgcagtggcacagtagtaagatgcagcaga
aaagaacttacatccccaccaagaaacatacccctgactgctacagagatatacttggat
tctaaccagctgattactatccctgaaggaatgacaggtcaaaagagtctccatacactg
gatctgagcaccaatttgattacgatgcttccagacaatgcgtttgccaacatgaccaag
ctctcaactcttatcctgagttataatcgcatcgcctgtataccaccagggaccttcagt
ggattgagctcattaagaatcctgtcactccagggcaatgacctctcgacgatccccgat
ggtgttttcaacgacctccattctcttagtcacattgcccttggtaataaccctctatac
tgcgactgtaagctgaggtggttatcggactgggtgaaagcagatgggtttaaggagccc
ggaatcgcaaagtgtgccgacccgtacgacctgagagggaaactcatccttactgctccg
tcaagatctttcctctgcagtgaagagccagatgtagctatccaggctaaatgcgacccg
tgcctctccagtccttgtgagaataacgctgtgtgtaccatcagcctgacggagcgctac
ctttgccaatgccaggaagggttcaagggtcgcaactgcgaggtggaactcaacgcttgc
gaggaagaagcgtgcttgaacggaggatcatgccacaaccttaataatggagggttccga
tgtgagtgtgcagctggctttgagggtgatctatgtgcagttaatatagacgactgtaaa
cagcatcggtgtctgaatgatgggatatgtgaggatggtatcaatgcatacacctgcttc
tgtagtctcggctactcaggctcattctgtgaagtggacaaggatctgtgtgccccaaat
accaacccatgtcagaatggtggtgtttgctacgatcttggacgcagctaccggtgcgaa
tgtctgacaggtttccaaggaatcaactgttctgaatcctaccaggattgtcgctcccac
ccttgcgaaaatggtggcgagtgcaggcaagagctgaatcaattcatctgcagctgcacg
cccggttatgttggtcagttctgctccgaccaacccattgtggtctttccccagacgtcc
ccctgtcagggtcacgactgtcagaataacgccctgtgttttgaggacagcgacgagttt
ggatgccgctgcctgcctggctacatgggtaacaaatgcgagatcccgaccagcatgacc
ttctctcaacaggacgcctacatcagcaggacggctccggagttctccagcaccgtcaat
ataacggtcatcttcgctaccacggaggagaacggcatcttgttgtattatggaaagacc
ggggaggcagaccacctcgctatcgagctcttccggggtcatatcagggtcagctttgac
gccgggaacttccccgccgcgacgatgttcggcgatgaggacctcaacaacggggaattt
cagagagttcaggtcatcgtgttgcagaggaacatttctttgaagatcaatgacaacgag
gtgcagaacgccaccaacgatggcgagagcccgttcctgggcttggataacctcatgtac
atcggcggcgcaccgagtaaagagaaagagggcgctgttcggcagtggcatctcagaaat
ggatcaagtttccatggatgtatgagtggcttctttgtcaatggccagccgatagcacca
cagggttctgaaccaggagttgctgggggatgcccgagtcttgaaacacacgacccctgt
gagaataacatgtgtgaacacggattctgcaagaagacagagactagctacacctgtgac
tgccaggatggttggatgggaaatatgtgtaacagaagaacaacatgcatgggagagaga
cgaacaaggaaagtccaggaggggagctgcagcagccgagagactgtgtccgacttggac
tgcagcggggagtgcggcatctcctgctgcacaccgcagcgggtccgcaccaggataatg
acgctgcactgcgacgacggtaccaccatccgacacaaggttaaactggttcggagttgc
gcctgccaagcatgcgtcaagagactggacatttttaaagggccaatttaa
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