Asterias amurensis (Northern Pacific seastar): 139940649
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Entry
139940649 CDS
T10870
Name
(RefSeq) pseudouridylate synthase TRUB1-like isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamu03016
]
139940649
Enzymes [BR:
aamu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
139940649
Transfer RNA biogenesis [BR:
aamu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
139940649
Prokaryotic type
139940649
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
139940649
NCBI-ProteinID:
XP_071793102
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All DBs
Position
8:complement(5630887..5637179)
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AA seq
311 aa
AA seq
DB search
MNQPISSFVYCGRWAFKGWPADGCRVQNEEIRVGARPSLKMPGVPCKQRFVSDLNGLFAV
YKPTGITSAFLVNRLKQILFSEQKRQDQDHSHHKTKGISQPSKRLRIGHGGTLDMNASGV
LVVGVGRGTKMLTNMLKGRKRYHAVGCLGSATDTQDALGKVTLQLPSGHVTQDMVEASLE
GFVGNIMQVPPLYSALKMGGVRMSDLARSGEINQPKPARPVTVHNLKSLQFSPPYFTLDV
HCGGGFYVRQLIHDLGKVLGTCAHLVELERTQQGPFTLQHVLQTEEEWTIQNICKAIADF
DKTIQPGRLLE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacccatatcatcgtttgtttactgtgggcggtgggctttcaaaggttggccg
gccgatggctgccgtgtacaaaacgaggaaattagagtcggggcaagaccgtccctgaaa
atgcctggtgtcccatgtaagcagcgttttgtgtccgatttgaacggcctatttgctgtc
tataagccaactggaattacctcagctttcctagtcaacagacttaagcaaatcctcttc
agtgaacaaaaacgtcaagaccaggaccacagccatcacaagacgaaaggaatctcacag
ccatccaagcgacttcggattggacatggtggaacgttggacatgaatgcctcaggtgtc
ttggtggttggagttgggagaggtacaaagatgctgactaatatgctgaaagggagaaag
cgttaccacgcagtcggatgtcttggttcagctacagacacacaggatgcactcggcaaa
gttacacttcagttgccatcagggcatgtaacacaggacatggttgaagcttcgcttgaa
ggatttgttggcaatataatgcaagtaccgcccttgtactctgccttgaagatgggtggt
gtaaggatgtctgacctagctcgctctggtgaaatcaatcagcctaaaccagcaagacca
gtcactgtgcataatctcaagtccctccaattttcaccaccatatttcactctggatgtt
cactgtggtgggggcttctatgtacggcaactgatccatgacctaggaaaagttctggga
acatgtgcacacctagtggaattggaacgaactcaacaagggccattcactctccagcat
gttttacaaacagaggaggaatggacaattcaaaacatctgtaaggctattgcggacttt
gacaaaaccatccaaccagggaggctcttagagtga
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