Asterias amurensis (Northern Pacific seastar): 139941212
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Entry
139941212 CDS
T10870
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu04130
SNARE interactions in vesicular transport
aamu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139941212
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139941212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139941212
Membrane trafficking [BR:
aamu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
139941212
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF473
Motif
Other DBs
NCBI-GeneID:
139941212
NCBI-ProteinID:
XP_071793773
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Position
8:complement(22946273..22953328)
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AA seq
198 aa
AA seq
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MKLLAITVLYKGHPKVVTLSSAYNLSSFGYFQKGSVQEYMKFTSRIVVERSTPGLRATVK
EQEYSCHTYVRSDSLSGVVIADHEYPSRVAFTLLNKVLDEFSTENSARSWPTLAENSVTF
KQLDAYLAKYQDPAQADPMMRLQSDLDETKIIMHNTIDAMLQRGEKLDDLVAKSNDLSLQ
SKTFYKTAKKTNSCCVIQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgttagcgattactgtcctttataaaggtcatcccaaagtcgtcactctatca
agtgcctataatttatcatcatttggctacttccaaaagggcagtgtacaagagtatatg
aagttcacatcacgcattgtggtagaaagaagtacgcctggcttgagagcaacagtaaaa
gaacaagagtacagttgtcacacatacgttcgaagcgattctttatcaggggtcgtcata
gcagatcatgaatatccctcaagagtagcttttacattattaaacaaggttttagatgaa
ttttcaacggaaaactctgccaggtcgtggccaaccttggccgagaattctgtgacgttc
aaacaacttgatgcatacctcgcaaagtaccaggatccagcacaggcagaccctatgatg
aggctgcagagcgatttagatgaaaccaaaattataatgcacaatacaatcgacgcaatg
ttacagcgaggagaaaaattggacgaccttgttgccaaatcgaacgacctcagtttacaa
tcaaagacattctacaaaactgccaagaagacgaactcttgttgtgttatccaatag
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