Asterias amurensis (Northern Pacific seastar): 139941473
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Entry
139941473 CDS
T10870
Name
(RefSeq) regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03013
Nucleocytoplasmic transport
aamu03015
mRNA surveillance pathway
Brite
Enzymes [BR:
aamu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
139941473
5.6.2.5 RNA 5'-3' helicase
139941473
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
139941473
mRNA cycle factors
Common to processing body (P body) and stress granule
139941473
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139941473
NCBI-ProteinID:
XP_071794095
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Position
9:4086299..4101607
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AA seq
1140 aa
AA seq
DB search
MSVDAYGPSSQSLTFLDTEDGELLGADTQGTDFEYNVGDFTLPSQTQTQSQASQLDVVSQ
SQSQVGLSLDAKPVQNGFVEDNVAATVQTLKDLTFEEDEEETYYTKDLPDHACRYCGIHD
PSAVVLCNSTKKWFCNGRGNTSGSHIINHLVRAKCKEVTLHRDSPVGETALECYNCGCRN
VFLLGFIPAKVDSVVVLLCRQPCATQSNLKDMNWDPTQWQPLIQDRCFLSWLVKVPSEQE
QLRARQISAAQINRLEELWKNNAEATLEDLEKPGADEEPASVMLRYEDAYTYQNIFGPLV
KMEADYDRKTKENQNQSNMSVRWDIGLNRKTRAYFNFPKKEDLKLMQGDELRLRYLGDLQ
EPWSGVGHVVKIPDNYGDEICVEIKISAKVPVNCINNFVVDFVWKSTSFDRMQSALKTLA
VDETAVSSFLYHKLLGHEVENMVIKSNLPKRFSAPNLPELNHSQVSAVRMVLTRPLSLIQ
GPPGTGKTVTSASVVYHLAKQGQGQVLVCAPSNIAVDQLTEKIHRSGLKVVRICAKSREA
IESPVSFLTLHRQVRNMEGNEEQQKLQALKDEIGELSSADEKRFRALKRNNERELLQNAD
VICCTCVGAGDPRLARFRFRAVLIDESTQATEPECLIPIVLGCKQVILVGDHCQLGPVVM
CKKAANAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVAAGDRI
NKAVEFPWPQRDKPMFFYATAGQEEISSSGTSFLNRTEASNVEKITTCFLRAGVKPDQIG
IITPYEGQRAFIVQYMQYSGPLNVKLYQEIEIASVDAFQGREKDYIILSCVRANDHQGIG
FLNDPRRLNVALTRCRYGVIIVGNPKVLSRHPLWNHLLTYYKEHKVLVEGPLNNLKESLI
QFSKPRKLVNTTNPGGRFMTSAMFSAKEAMIPGSIYDRSGMMNGGSSRFVHGPGRIHDQM
GYIGPGPAQFAGANLPVPVNMFMPPPPQPGNHFYNQGMPGPPMGGHMPQQRGKGAPPYSK
RRGKPPGQQGQGKGSQQGMGGASQPGNSSQNMSQYNLSMQSQDGSMPFSQGPLTQGMSMS
QPGLSQAGFSLPGLSQPGLSQPELSQDSYLGEEFKSQMDAALSQDSTYQGDRNYQHGFGY
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgatgcgtacggtccgagctcgcagagcttgacttttctggacacggaagac
ggcgagttactgggagccgacacgcaggggacggattttgagtataatgtaggggacttc
accctgccgtctcagacgcagactcaaagccaggcatcacagcttgatgtcgtgtctcag
agtcagagccaagttgggttgtctttggatgcaaagccagtacagaatggctttgttgag
gacaacgttgcagctacagtacaaacactgaaggacttgacctttgaagaagatgaagaa
gagacgtattacaccaaagacctacctgatcatgcatgcaggtattgtggcatccatgat
ccatctgcagtggtattatgcaactccactaagaaatggttctgcaatggccgtggcaac
acctcgggaagccatatcatcaaccacctcgtgagggccaagtgtaaggaggtcaccctt
caccgcgacagtcccgtaggagagactgccctcgagtgttacaactgtggatgtcgcaac
gtgttcctactgggtttcatccctgctaaagttgactcggtcgtcgtgctgctttgccgc
caaccctgtgccacccagagcaacttgaaggacatgaactgggacccaacccagtggcag
cctctgattcaggatcgctgcttcctcagctggttggtcaaggtcccctcggagcaggag
cagctcagagccaggcagatctcggccgctcagatcaatcgactggaggaactgtggaag
aacaacgcagaagccacgctggaagatctggagaaaccaggagctgatgaagagcctgct
tcggtcatgttgagatatgaagacgcttacacctatcagaacatcttcggtcctctggtg
aagatggaggcagattatgatcgcaagaccaaggagaatcagaatcagagcaacatgtct
gtacgttgggacatcggactcaatcgcaagaccagggcttacttcaatttccctaagaaa
gaagatttgaaattgatgcagggagatgagttgaggctgcgctaccttggtgacttgcaa
gaaccttggtcaggagtgggtcatgtagtcaagataccagacaattatggagatgagatt
tgtgttgagattaagataagtgccaaagtacccgtcaactgcatcaacaactttgtggtg
gactttgtgtggaaatccacatcttttgacagaatgcaaagtgccctgaagacgctggca
gtggacgagacggccgtgtctagtttcctgtatcataaactccttggtcatgaggtggag
aacatggtgatcaagagtaacctgcctaagcgattctccgcacccaatctccccgagttg
aaccactctcaagtgtctgctgtgcgcatggtgctcacacgccctcttagtcttattcag
ggcccacctggtacaggaaaaactgtcacatcggccagtgttgtctaccatcttgccaag
caaggacaggggcaagtgttggtgtgtgcacccagtaacatcgctgtggaccaactgact
gagaagatccatcgttctggattgaaggtggtcaggatatgtgccaagagtagagaagct
atcgagtcaccagtctcgttcctcacactccacagacaggtgcgaaacatggaagggaac
gaggagcagcagaaactacaagctctgaaggatgagatcggagaattgtccagcgccgac
gagaaacgcttccgtgcgctgaagaggaacaatgagagagaactcctccagaatgctgat
gtgatatgctgtacgtgtgtgggagcaggggaccctcgtcttgcccggttccgattccga
gccgttctcatcgacgagagtacgcaggccacggaacccgagtgtctcataccgattgtg
ctcggatgcaaacaggtcatcttggtaggggatcattgtcagctaggcccagtggtcatg
tgcaagaaagcggcaaacgccggcctctcacagtcgctcttcgagcgtcttgtggtcctg
ggcatccgaccaatcagattgcaggttcagtatcgtatgcacccggccctcagcgctttc
ccatccaacattttctacgagggatctctgcagaatggtgtggcagctggtgatcgaatc
aacaaggcggtggagtttccctggccccagcgagacaaaccgatgttcttctatgccacg
gctggacaagaggagatctccagctccggtacctccttcttaaacagaacggaggcgtct
aatgtcgaaaagatcacaacatgtttcctgcgtgccggcgtcaagcccgaccagattggc
atcatcacaccctacgagggccagcgtgcgttcatcgtccagtacatgcagtacagcggc
cctctgaatgtcaaactctaccaggagatcgagatcgccagcgtcgacgctttccaggga
cgggagaaagactacatcattctgtcgtgtgtccgtgccaatgaccatcagggcatcggg
ttcttgaacgacccacgccgtctgaatgttgctctgactcgctgcaggtatggtgtgatc
atcgtgggtaaccccaaggtcctgtcacgtcacccactgtggaatcaccttctgacctac
tacaaggagcataaggtcctggtcgaaggacctcttaataacctgaaggagagtctgatt
cagttcagtaagccaaggaagctcgtcaacacaacaaacccaggtggtcgttttatgacg
tctgcaatgttcagcgccaaggaggccatgataccaggcagtatctatgatagatcaggc
atgatgaatggaggatccagtcgttttgttcatggaccaggccgtatccacgaccagatg
ggttatatcgggccaggccctgcccagttcgcgggggccaacctcccagtaccagtcaac
atgttcatgcctccaccccctcaaccaggcaatcacttctacaatcagggcatgccgggg
ccaccgatggggggccacatgccacagcagcgggggaagggtgccccgccatactccaag
aggaggggcaagccacccgggcagcaggggcaagggaaaggctcgcaacaaggaatgggc
ggggctagccagccgggcaactctagccagaatatgtctcagtacaatctctccatgcag
agtcaggatgggtcgatgccattctcccagggaccactcacccaaggcatgtcgatgagt
caaccgggcctatcccaggctggcttctccctgcctggtctctcccagccaggcctgtct
cagccggagctgtcacaggacagctacctgggagaagagttcaagtcccagatggatgca
gcactgtctcaggactccacctaccagggtgatcgtaactaccagcacggcttcggttat
tag
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