Asterias amurensis (Northern Pacific seastar): 139941924
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Entry
139941924 CDS
T10870
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139941924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139941924
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
139941924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_16
TPR_8
TPR_19
TPR_11
TPR_12
TPR_CcmH_CycH
TPR_17
ANAPC3
TPR_9
ARM_TT21_C
RPN7
TPR_15
ARM_TT21_N
ChAPs
TPR_30
COG4_N
Motif
Other DBs
NCBI-GeneID:
139941924
NCBI-ProteinID:
XP_071794669
LinkDB
All DBs
Position
9:complement(10935260..10999918)
Genome browser
AA seq
1559 aa
AA seq
DB search
MASGSSKEVKQTLRNARDAIKAKDYKEALEHCESVLKLDKNNYNALVFVGVAAAQSDQPD
KALAAYRKAIKLDSQQLLAWQGLAGFCEKSENPDLKTELVDVYSHLGELLVTKDNKKWLD
VSEKLAKLHCQLGKTQEAIQVLKAIIKSGETSDPAACLRSWIQITELLAGVKVLSKDDVF
LLDKAYKVILETEASEPQHFSGYIKFLKKRDDITSDIVQSECLKMHDRFPLDPYPLTVIS
ELFLKHQPESLEDGALPIYKKLQELDGASGIASLGLGQVCLARKEYTTARDSLQRGLQTC
RDNVHGWLYLARTQLYTHDSQASVDSTKTGIKILKVKKNMASSQLKRALLIVQAKALLDG
ASVGQAEEALQIYKKLLCDEQQDDGNKLDILCGLCSTYLILGNAEKTKEFYEKAKEVNSQ
DDKVFALHGRICITEGQYQQAEERFLDTLSLASDCGLYHFWLGKVYWEMGQTTRSDKSKM
LASLLKAAKLDPYYSDTFLFLGHFYWKVVGDKSKGRKCYQKAFELKPSNEEAGMSLGDAC
VDLGDKESAVQLYRNVTQTAAAGTVKWAWLRLGLYYHHEGSPNQAIDSFQAALRADPKDR
HCWECLGDAYMIRGSYTAALKAFTRGVELDPSATYCLYQIAAIKQMLEVYSEAVAEYQLI
LDSDPDYIPALKGQGETYVRLAKSSLQQYFNGRAVDYVKLAIQVLERASSLRPDLSCVWK
LLGDACTLLHPLSDSLISVTVPSNLIVDQSLRGKKAQSKKQLLAIGARCYGRALRLQSGC
SSLWHDLGMNYYHQSRNDDATSVVQLADKALQCLKKAIVVDSANHSHWTALGVIASGKGV
DDPALAQHAFIKSIQVEPNNVVAWTNLGALYLVQGNQELAHQAFKIAQSLEPSYVQCWIG
QALVAETIVREEAMDLFRHTTELATHSEGAVGYAHWVCETLLDSSLDMTSQLYRYNIVQM
NAVSLATVGLDKVTDRIQTDACAHTMHGLLLERQGLHKSASKAFARALELVNKNRNQDVM
SIALANYARSLCSVGQYEEAVKHFQSVTPLIRLEDICCLALSLYKTGNLQASYQAYEQAL
QLATDGLIRSQLLTCLGMVAFQCGDQDRTKTLLFQSSQESEPSPEGLLALLALGVHLSDF
TLAEAAVTELKKFKDKQGFIADVAFAGTVIHALKGQYHLAYRQVAKAIRRHPGLPELWRL
MAEIILQLIPEKAQAAVKCSHASIQDKKATKGSVSVYALATLAMGLHSKSTPTSQRCLNA
AQKAVHLYPDSLENWAALSASYLSHGIWNSAQTHSEHVENNMASKLATFVHSWGKESENA
AIQKWSALQIVVSLLHEGKIERADALTRKLEVVYQSDAIMKSTLQLLQAEAVCMQHVSHQ
SIEFLRRVITMTSHQSSAAWQLLAKLYEKEGMVAAAESAYKQSVVHSQPGQQVVPFLRLA
YLALRATKVSSDERWLLLGLEATTEVLKILPHCAVALLLQGLLQHHKGNTRPSKRCFQQV
LAISSDDKMNLARSVARFHMIQILLDKKDLSSAQVLVDEAAQENDLNLQQLQDIMSTAQ
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgggagcagcaaggaagtcaagcagactttgaggaatgccagagatgcgatt
aaagctaaagactacaaagaagcactggaacactgcgagtcagtgcttaagttggacaag
aataactacaatgctcttgtgtttgttggtgtggctgcagctcagtcggaccagccagac
aaggcactggctgcttacaggaaggctatcaagttggactcacaacaactcctagcttgg
cagggccttgcaggcttctgtgagaaaagtgagaaccctgaccttaagacagaactggtt
gatgtttacagtcacctgggagagctgctggtgacaaaagacaacaagaaatggcttgat
gtatcggagaaacttgccaaactccactgtcaacttggcaaaactcaagaggcaattcaa
gtgctgaaggccatcataaagtcgggagaaacatcggacccagcagcttgtttgagatcc
tggatacagattactgaactcctggctggagtcaaggtgttatcaaaggatgatgtcttc
ctgttggacaaagcctacaaagttattcttgaaactgaagcgtcagaaccacagcacttc
agtggctacatcaaatttttgaagaagcgagatgacatcaccagcgacattgtccaatca
gaatgtctgaagatgcatgaccggtttccactcgacccttacccccttacagtcatctca
gagttattcttaaagcatcagccagaatcattggaggatggagcgttgccaatttacaag
aagctgcaagaactggatggagcatccggcattgcatccctcggtcttggacaagtgtgt
ctagcacggaaggaatacaccactgcgagagacagtcttcaaagaggtcttcagacctgc
agagataatgtacatggctggctctacttagctagaacccaattgtatacgcatgacagt
caagcatcagtggactcaacgaaaacaggtatcaagatattgaaagtaaagaagaacatg
gcatcatctcaactcaagagggctctcttgattgtacaagccaaagcacttttagatgga
gcctctgtgggtcaagcggaggaagcgttacagatctataaaaagttactttgtgatgag
cagcaggatgatggcaataagttggacattctctgtggactgtgctcaacatatcttatt
ctgggaaatgctgagaagaccaaagagttttatgagaaagcaaaagaggttaacagtcaa
gatgacaaagtgtttgctctccatggaaggatctgtattactgaaggtcaataccaacag
gcagaagagaggtttcttgacacattgagtcttgcatcagactgtggactgtaccatttc
tggctgggaaaggtttactgggagatgggacagactacaaggagtgacaagtcaaagatg
ttggcatcactgttgaaggctgcaaagttggatccttactattcagacacctttctattc
cttggccacttctactggaaagttgtcggtgacaaaagcaaagggagaaaatgctaccag
aaagcatttgagttgaagccgagtaacgaagaagcagggatgtctttaggagatgcctgc
gttgacttgggagataaggaatctgctgtacagttatacagaaatgtgacccaaactgcc
gctgctggaactgtcaagtgggcttggctgaggctgggattatactatcatcatgaaggc
agtcccaatcaggctatagacagcttccaggcagcactacgagctgatcctaaagacagg
cattgttgggaatgtcttggggatgcgtatatgattagagggagctacacagcagcactc
aaagcatttacaagaggtgtagagcttgatccatctgcaacatactgtttgtatcagata
gcggctataaagcaaatgcttgaagtatactctgaagctgtggcggagtaccaactcatc
ttagatagtgacccagactatatccccgcattaaaaggtcagggggagacgtacgtccgt
cttgctaaatcctcgctccagcagtacttcaatggaagagcagtggactatgtcaagcta
gccattcaggtcttggagagggcgtcgtcattgaggcctgatctgagctgtgtgtggaag
ctgttaggtgatgcctgcacattactacatcctctcagcgactctcttatcagtgtgaca
gtgcccagtaacctgatagtagaccagtcactacgcgggaagaaggcacagagtaagaag
caattgcttgccattggagcacggtgttatgggagagcattacgccttcagagtggttgt
tccagtctatggcatgatctaggtatgaattactaccatcagtctcgcaatgatgatgca
acgagcgtcgttcagcttgctgacaaggctctgcagtgtctgaagaaagccatagttgtg
gacagcgctaaccacagtcactggacagctctgggtgttattgcatcaggcaaaggtgtg
gatgatcctgcactcgcacaacacgcattcatcaaatctattcaagttgaacccaataat
gttgtggcgtggaccaatcttggagcactttacctcgtccaaggcaaccaagaactagcc
caccaagccttcaagatagcccagtctttggagcctagctatgtacaatgttggattggg
caagctcttgttgctgagaccattgtacgtgaagaggctatggacttattccgccataca
acggaactggccacccatagcgagggcgctgttggctatgctcattgggtatgcgagacc
ctgctagactcatctctggatatgacatcacagctatatcgttataacatcgttcagatg
aatgctgtctccctggcaactgtaggtcttgataaagtcacagatcggattcaaactgac
gcctgtgcacataccatgcatggattacttctggagaggcaaggcctgcacaaaagtgca
agcaaagcatttgcaagggcattggagctggtaaataaaaaccgtaaccaggatgtgatg
agtatagcattggccaattatgcaagaagtctatgctccgttggtcagtacgaggaagca
gtgaagcattttcagtcagtgacacctctgatcagactggaggatatctgctgcttagca
ctgtctctctacaagacgggcaacctacaggccagctatcaggcttatgagcaagctctg
caattggctactgatggtttaattcggtctcagctgttaacgtgtctcggcatggtggca
ttccagtgtggggaccaggaccgaaccaaaacgttactcttccaaagttctcaagagtcg
gagccgtctccagaaggcctcttagctctcttagcgctgggtgtgcatcttagtgacttc
acattagcagaggcagctgtgacagaactcaagaagttcaaggacaaacaaggcttcatc
gctgatgtggcttttgcagggactgtgattcatgctcttaagggccaatatcacctagcg
tacagacaggttgcaaaggcaataagaagacaccctggacttcctgaactctggagactg
atggctgagattattcttcaactaataccagagaaagcccaggcagccgttaaatgcagt
catgcatccatacaagacaaaaaggctacaaagggttcagtttcagtgtatgccttggct
actctagcgatgggtctacacagcaagtctacacccaccagtcagaggtgtttgaatgct
gctcagaaagccgtacatctctatccagactcgctggagaactgggctgcactgagtgcc
agctatctctcacatggaatatggaactcagcgcagacgcattctgagcatgtggaaaac
aacatggcgtccaagctggctacatttgtgcattcttggggtaaggaaagtgaaaatgct
gcaattcagaaatggtcagcgttacagattgttgttagtctactacatgaaggcaagata
gagagagctgatgcactcactagaaagttagaggttgtgtatcagtcagatgccatcatg
aagtcaacgttacagctcctacaagcagaggcagtctgcatgcaacatgtctcacatcaa
agtattgagttcctgagaagagtcataacgatgacctctcatcagtcatccgcagcgtgg
cagttattagccaagctgtatgagaaagaaggcatggtggctgcagcagagtcagcctac
aaacaaagtgtagtacactcacagcctgggcagcaggttgttccgtttcttagattggct
tatctggctttaagagcaactaaggtgagcagtgatgagcgatggttacttcttggactg
gaagcaactactgaagtcttgaagattctaccacactgtgctgtagctctgctactacag
ggacttctacaacatcataaaggcaatacgaggccttccaagagatgttttcagcaagtt
cttgcgatctcctcggatgataaaatgaatctcgccagatctgtggccagatttcacatg
attcagatcttactggacaagaaagatctcagttcagctcaggttctggtggacgaagct
gctcaagaaaatgatctcaaccttcaacagcttcaagatatcatgtctactgctcagtaa
DBGET
integrated database retrieval system
