Asterias amurensis (Northern Pacific seastar): 139942304
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Entry
139942304 CDS
T10870
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamu04131
]
139942304
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamu04990
]
139942304
Membrane trafficking [BR:
aamu04131
]
Protein recycling
Others
Others
139942304
Domain-containing proteins not elsewhere classified [BR:
aamu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
139942304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
SNX17-31_F2_FERM
SNX17-27-31_F1_FERM
RA
RA_2
PDZ_2
SNX17_FERM_C
Sina_TRAF
PDZ_Tricorn
FERM_N
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
139942304
NCBI-ProteinID:
XP_071795223
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Position
9:8946114..9014751
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AA seq
588 aa
AA seq
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MADDEDGSSASERSPMALQANKPRVVTISKSDTGFGFNVRGQVSEGGQLKSINGELYAPL
QHVSAVLEGGAAEKAGVSKGDRILEVNGINVEGATHKYVVDLIKQGGAELTLTVISVPNF
KEDQGEPSDDSSGYSYCDFSDRKPVPITVPDYQHVYTGDKHVVYNIYLAGKLKKAQRYSQ
FADLHNRLKREFPDFQFPKFPSKWPFSLSEQQLEARRRGLEQYLEKVCCVRVIGECDSVR
EFLNLEDAETHETFDEVTNTPQETSSKREDQSTAQVELRVLVPDRSQITVTVRRNNTTPD
VYNAVVHKIGLSREVADYFALFEIQEDFTRKLAVTEFPHNLYIQNYTKSSTSQSCIGLGR
WIFSPQQELFLNHDEIAMNFLYWQAIDDVSKGLIQPGDSLYELKTYQEKSSKLQYLKVAR
SLDGYGEVRFPHCPCDARKAGRVIPILGFRLFKLQACKDDGSLEEQVPSFQWNEIREYEV
DDEGMAFCFEYAKEGKKPRWVKIYTKYFNYMNECVERILKEKKWTKDNTNHQQKREQDGE
GEEEGEDEEEEERAQAIASQNNKESSKSRVRTNQTAGKIFDTLNEDDL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgaggatggatcgagcgcttctgagcgctcacccatggcgctgcaagcc
aacaaaccccgggttgtcaccatctcgaagagtgacaccggctttgggtttaacgtgagg
ggtcaggtcagcgaagggggacaactgaagagtatcaacggcgagctgtacgcccccctg
caacatgtcagcgccgtgttggagggaggggcggccgaaaaagccggtgtgtctaaggga
gaccgaattctggaagtaaatggtattaacgttgagggcgctacacacaagtatgtggtg
gacctgatcaagcaaggcggggccgagctgacgctcaccgtcatctcggtgccaaacttt
aaggaggatcaaggggagcccagcgatgactcgtcgggctactcgtactgtgatttcagc
gacaggaaaccggtacccatcacagtgcccgattaccagcacgtctatacgggagacaaa
catgtggtctacaacatctacctagctggcaaactcaagaaggcccaaaggtacagccag
tttgccgatcttcacaatcggctaaagcgagagtttcccgattttcaattccccaagttc
cccagcaagtggccgttctcgttatcggagcagcagctggaagcgaggaggagggggctt
gaacagtatctggaaaaagtttgttgtgtacgggttattggtgaatgtgattctgtacga
gagttcctcaacttggaagatgcagagacacatgagacttttgacgaggtgacaaacaca
ccccaagaaaccagtagtaagagagaggatcagagcacagcccaggtagagctaagagta
ctagtacctgacagatctcagatcaccgttaccgtccgaagaaataacactacgcctgat
gtatataatgccgtagtgcataaaattggactcagtagagaggtggccgactattttgcc
ctgtttgaaatccaggaagatttcacgaggaagcttgccgtcacggagttcccccacaat
ctctacattcagaattacactaaatccagcactagtcagagctgtatagggctcggcaga
tggatcttctcaccgcagcaagagctgttcctcaatcacgatgagattgccatgaatttt
ctttactggcaggcaatagatgatgtcagtaaagggttaatccagccaggcgacagctta
tatgaattgaaaacataccaggagaaatctagcaaacttcagtacttaaaggttgctcgc
agcctagacggttacggtgaggtgcgctttccgcattgtccgtgtgacgccaggaaggct
ggccgtgttataccaatccttggattcagactcttcaaactccaagcctgtaaagacgac
ggttcattagaggagcaagtgcccagcttccagtggaatgagatcagagaatacgaagtg
gatgatgaaggcatggcattctgctttgaatacgccaaggagggaaagaaaccaagatgg
gtcaagatttatacaaaatattttaactacatgaatgaatgcgttgagcgcattttgaag
gagaaaaagtggaccaaagacaacaccaatcatcagcagaagagggagcaggacggggag
ggggaggaggagggggaagatgaggaggaggaagagagagctcaggctattgcatcacaa
aataataaggaatcatcaaaaagtagagttcgaacgaaccaaacagccggtaagatattc
gacactctcaacgaagatgacctctga
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