Asterias amurensis (Northern Pacific seastar): 139942839
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Entry
139942839 CDS
T10870
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu00900
Terpenoid backbone biosynthesis
aamu01100
Metabolic pathways
Module
aamu_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
139942839
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aamu01006
]
139942839
Enzymes [BR:
aamu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
139942839
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
139942839
Prenyltransferases [BR:
aamu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
139942839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
139942839
NCBI-ProteinID:
XP_071795725
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All DBs
Position
10:complement(1446839..1458445)
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AA seq
427 aa
AA seq
DB search
MTQISSMLGRNLRFILDSGFLTGRFFGGGAVSSRSWVNIVPSTACPIRKAGRCTSVINHG
VYRNRSGNINIQIGQYRFMMAGNTAMDAERFGDVFQELVKDIVGDDESNPEIRDAALRFE
KMLAYNVPHGKRNRGLTTVASFRHLAKPSQMTDGNLHKAMVLGWCVELLQAYFLIADDIM
DQSKTRRGQPCWFRKSDVGMDAINDSFFVETAIYKLLKKHLANEPYYVNVLEMFHETTYQ
TVIGQSLDLITSPEGNKDLNRFTQQRYDAIVKWKTAFYSFYLPVALAMFMVGISDEESHK
NAKIILLQMGHFFQVQDDFLDCYGNPEVIGKIGTDIEENKCSWLVVQALKAATQEQREVL
EENYGIDNPAKVAMVKSLYKDLNLETAYRNYEEQSYNDLQQLIDKHMGQLPKEMFIAYAK
KIYKRQK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaatttcatcgatgctgggtcgaaacttgcggtttattttggattcggggttt
ttaacgggacgattttttggaggcggagctgtctcttcacggtcgtgggtgaatatcgtc
ccatccacggcatgtccaatcaggaaggcgggtcggtgtacgtcagtcatcaatcacggt
gtttatcgaaataggtcgggaaatatcaatatacaaattggacaataccgtttcatgatg
gccggtaacacagctatggatgcggagaggtttggtgacgtcttccaagaattggtcaaa
gacatcgtcggagacgatgagagtaatcctgaaattagagatgctgcactgaggtttgaa
aagatgttggcctacaatgtcccacacggcaagaggaatcgtggtctaacgaccgtcgcg
tccttcagacatcttgcgaaaccgtcccagatgactgatgggaacttacataaagcaatg
gttcttggctggtgtgtagaattgcttcaagcgtactttctgattgccgatgatataatg
gaccagtccaaaacgagaagaggacagccatgctggttccgtaaatcggatgttggtatg
gatgccataaacgattccttcttcgttgaaaccgccatctacaagttattaaagaaacat
ctggcgaatgaaccgtattacgttaatgtgctggagatgtttcatgagaccacctaccag
acggtcatcggtcagtccttggacctcatcacatccccagagggcaacaaagatctcaac
agattcacccaacaaagatacgatgcaatagtgaaatggaagacagcattttattcattc
taccttccggtggcactggccatgtttatggttggaatatcggatgaagagtcgcataag
aacgccaagataatcctgctgcagatgggccactttttccaggtccaggatgacttcctt
gattgctacggcaacccagaagtgatcggtaaaatcggaaccgatattgaggagaacaaa
tgcagttggttagtggtgcaagctcttaaggcagcgactcaagaacaacgcgaagtatta
gaggaaaactacggcatcgacaacccagcaaaggttgccatggtaaagagtttatacaaa
gacctcaacttggaaacggcttaccgcaactatgaggagcagagttataatgacctccag
cagctgattgataaacacatgggacagctacccaaagaaatgttcattgcttatgccaaa
aagatatataagaggcagaaataa
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