Asterias amurensis (Northern Pacific seastar): 139943450
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Entry
139943450 CDS
T10870
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03013
Nucleocytoplasmic transport
aamu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139943450
03015 mRNA surveillance pathway
139943450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139943450
03041 Spliceosome [BR:
aamu03041
]
139943450
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139943450
Spliceosome [BR:
aamu03041
]
Complex C
Other components
EJC/TREX
139943450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
139943450
NCBI-ProteinID:
XP_071796365
LinkDB
All DBs
Position
1:complement(5003474..5018034)
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AA seq
504 aa
AA seq
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MAYVSALQGRLEKAKESLQNVDENIRKLTGREPGERRIPAGAADRGRDRDQRRVSVGGQG
QRGRGRGGGVQRGDAFQRLGLPLQRRQSTGSAFSRLGGRVDGPRLGGRVDGGPKLGGRVD
GPRLGGRVDGARSRVDGPQPKRLRRKQNDDDDDLPKHTIQSSVVATPIIERTRQDSIKEQ
SKNEEGQKRNRRMFGHLLGTLQKFKQESNDSESKESRRVEIEHKLDVQAQEEKQAVAHER
KQLFIKRSNQQLELQKLEKLVDMAKEQDVWDAHSKRLSQYIRTKAKPAIFYRPAKPSLVT
EKRLKDTKELMNEMMKKRRAEIEEEIQQLQDEAEEHDGKEMEHDGKESSEVKGKTKEKKR
RHSSKGKHEEGEQRNGKHSKKRPVSDDGELPTSEQQDTDDDDGKETSKDNKKAAISMEAE
QEWVVKEGSAGKDGEGKQPTSSSEEGEVDRTMTESAGPEESGDADEGKENIDEKEKEDFR
SALYKEEEFDQRNELSWEEEPMEQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgtgtcggctttgcagggtcggcttgaaaaagcgaaagaaagtcttcaaaac
gtcgatgaaaatatacgaaaactgacaggcagagaacctggggaaaggagaattcctgct
ggtgcagcagaccgtggtagagacagagaccagcgcagagtgtcagttggaggccaggga
cagaggggtagaggcagaggaggtggtgtgcaaaggggagatgcgtttcagcgtttgggc
ttaccactacaaaggagacaaagtaccggcagtgcctttagcaggcttggtggccgtgtg
gacggaccaaggctagggggccgggtggacggcggaccaaagcttggtggccgggtggac
ggaccaaggcttgggggccgcgtggacggagcaaggagccgcgtggatggaccacagccc
aaacgactgcggcggaagcaaaatgatgatgatgacgatctgcccaagcacaccattcaa
tcctctgttgtagctacccctatcatagagagaacgcgtcaagattccatcaaggagcag
agtaaaaatgaagaaggacagaaacggaatcggcggatgtttggtcaccttctaggtact
ctgcagaagttcaaacaggaatccaacgattcagaaagcaaggaaagcagacgtgttgaa
atagaacacaaactagacgtccaggctcaggaagagaagcaagctgttgcacatgaaaga
aaacaactgtttatcaaacgaagcaatcaacagctagaactgcagaaactggagaaacta
gtggatatggccaaagagcaagatgtgtgggacgctcatagtaagaggttgagtcagtac
attcgcactaaggctaaaccagcaatattctacaggccggcaaagccatcattggtaact
gagaagaggttgaaagatactaaagaattgatgaacgagatgatgaagaaacgtcgggcg
gagatcgaagaggagattcaacaactgcaggatgaggcggaggagcatgatgggaaggaa
atggagcatgatggcaaggagtcttcagaggttaagggtaagaccaaggaaaagaagaga
cgacatagtagtaagggtaagcatgaggaaggcgagcaaagaaacggaaagcattccaag
aagcggccggtcagcgatgatggtgagctgccgacgtcagagcagcaagacaccgacgac
gacgatggtaaagaaacttccaaggataataagaaagccgccatctcaatggaggctgag
caagagtgggtagtgaaggaagggtcggcaggtaaggatggggaagggaaacagccaacc
tcttcctcagaggaaggggaggttgatcggacgatgacggaatccgcaggaccagaagaa
agcggagatgcggacgaggggaaagagaacatagacgagaaagagaaagaggactttaga
agtgccttgtataaggaggaggagtttgatcagaggaatgaactgtcttgggaggaggaa
ccaatggagcagtga
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